Gvermi12790.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi12790.t1 vs. uniprot
Match: A0A2V3IEU1_9FLOR (Chlorophyll a-b binding protein, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEU1_9FLOR) HSP 1 Score: 405 bits (1041), Expect = 1.720e-142 Identity = 191/218 (87.61%), Postives = 207/218 (94.95%), Query Frame = 0
Query: 1 MFAFVSGFAGLPATRASTFTGKSFAVHHAPVRTARYTMEASKSVPFLPKPAKLDGTLPGDVGFDPLGFSNAFDINFLREAEVKHGRICMLAIVGWVFPEAVYHLPNEIYSATNPLYAVPKVGWLPAIQILLFIAACEAATSYKKVYEQKCEDPGNYGFDPLNLAGTPEKKKRQQTAEIKNGRLAMIAIGGAIHHALLTNVGLVEQIKSGQWFGGYYVH 218
MFAFVSGFAGLPATRAS+F G F+ H+PVRTAR++M ASKSVPFLP+PAKLDGTLPGDVGFDPLGFS+ FD+NFLREAEVKHGRICMLAIVGWVFPEAVYHLPNE+YSATNPL A+ KVGWLP IQILLFIAACEAAT YKKVYEQKCEDPGN+GFDPLNLAGTPEKKKR+QTAEIKNGRLAM+AIGGAIHHALLTN+GLVEQI+SG+WFGGYYVH
Sbjct: 1 MFAFVSGFAGLPATRASSFNGAQFSQTHSPVRTARFSMAASKSVPFLPQPAKLDGTLPGDVGFDPLGFSDMFDLNFLREAEVKHGRICMLAIVGWVFPEAVYHLPNEMYSATNPLDAIGKVGWLPVIQILLFIAACEAATGYKKVYEQKCEDPGNFGFDPLNLAGTPEKKKRRQTAEIKNGRLAMVAIGGAIHHALLTNMGLVEQIQSGRWFGGYYVH 218
BLAST of Gvermi12790.t1 vs. uniprot
Match: R7QMN6_CHOCR (Light-harvest protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMN6_CHOCR) HSP 1 Score: 320 bits (819), Expect = 1.070e-108 Identity = 154/218 (70.64%), Postives = 178/218 (81.65%), Query Frame = 0
Query: 1 MFAFVSGFAGLPATRASTFTGKSFAVHHAPVRTARYTMEASKSVPFLPKPAKLDGTLPGDVGFDPLGFSNAFDINFLREAEVKHGRICMLAIVGWVFPEAVYHLPNEIYSATNPLYAVPKVGWLPAIQILLFIAACEAATSYKKVYEQKCEDPGNYGFDPLNLAGTPEKKKRQQTAEIKNGRLAMIAIGGAIHHALLTNVGLVEQIKSGQWFGGYYVH 218
M AFVSGFAG R++ F+G S + APV A +M SKS+P++ +PAKLDG+LPGDVGFDPLG SN F+++FLREAEVKHGRICMLAIVGWVFPE VYHLPN YS TNPLYAVP VG+LP IQILLF+A CEAA +YKKVYEQ CE+PG++G DPL + TPE+K Q AEIKNGRLAMIAIGGAIHHALLTNVGL EQI+SG + GGYY+H
Sbjct: 1 MIAFVSGFAGASVARSNAFSGTSVSTRSAPV-VANVSMSMSKSIPYMERPAKLDGSLPGDVGFDPLGISNMFELDFLREAEVKHGRICMLAIVGWVFPEMVYHLPNAAYSVTNPLYAVPSVGFLPCIQILLFMAVCEAA-AYKKVYEQNCENPGDFGIDPLGFSKTPERKAHYQLAEIKNGRLAMIAIGGAIHHALLTNVGLWEQIQSGMYTGGYYIH 216
BLAST of Gvermi12790.t1 vs. uniprot
Match: Q7XY92_GRIJA (Light-harvest protein (Fragment) n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XY92_GRIJA) HSP 1 Score: 296 bits (758), Expect = 1.460e-99 Identity = 141/202 (69.80%), Postives = 162/202 (80.20%), Query Frame = 0
Query: 17 STFTGKSFAVHHAPVRTARYTMEASKSVPFLPKPAKLDGTLPGDVGFDPLGFSNAFDINFLREAEVKHGRICMLAIVGWVFPEAVYHLPNEIYSATNPLYAVPKVGWLPAIQILLFIAACEAATSYKKVYEQKCEDPGNYGFDPLNLAGTPEKKKRQQTAEIKNGRLAMIAIGGAIHHALLTNVGLVEQIKSGQWFGGYYVH 218
+ F G + + AP + AR++M+AS SVPFL +P KLDG+LPGDVGFDP GFSNAF++NFLREAE+KHGRICMLAI+GWVFPE V HLPNE YSATNPLYAV VGWLP IQIL FIA CEA KVY++ C +PGNYGFDP L P+ K+ + AEIKNGRLAM AIGGAIHHALL NVGLVEQI SG+WFGGYY+H
Sbjct: 7 TAFAGAAVSRAAAPAK-ARFSMDASASVPFLERPPKLDGSLPGDVGFDPCGFSNAFELNFLREAELKHGRICMLAILGWVFPELVGHLPNEAYSATNPLYAVGSVGWLPIIQILAFIAICEAK-GVAKVYDENCANPGNYGFDPFGLTANPKTKQHYELAEIKNGRLAMCAIGGAIHHALLRNVGLVEQITSGKWFGGYYLH 206
BLAST of Gvermi12790.t1 vs. uniprot
Match: A0A1X6NK41_PORUM (Uncharacterized protein n=2 Tax=cellular organisms TaxID=131567 RepID=A0A1X6NK41_PORUM) HSP 1 Score: 207 bits (528), Expect = 2.530e-64 Identity = 111/208 (53.37%), Postives = 134/208 (64.42%), Query Frame = 0
Query: 13 ATRASTFTGKSFAVHHAPVRTARYTM----EASKSVPFLPKPAKLDGTLPGDVGFDPLGFSNAFDINFLREAEVKHGRICMLAIVGWVFPEAVYHLPNEIYSATNPLYAVPKVGWLPAIQILLFIAACEAATSYKKVYEQKCEDPGNYGFDPLNLAGTPEKKKRQQTAEIKNGRLAMIAIGGAIHHALLTNVGLVEQIKSGQWFGGYY 216
A+ S+F G F AP A EASKSVPF +PA LD + GDVGFDPLGFSNAFD+ +L EAE+KH RI ML +G +FPE YHLPN YS TNPL AVP VG+ P QILLF+ EA SY+K+ G++GFDPL LA +KR +E+KNGRLAMIA GG IHHAL+T+ G + QI+ G + GG Y
Sbjct: 18 ASATSSFAGARFVRAAAPTAAATIDTTIRAEASKSVPFWERPASLDKSYAGDVGFDPLGFSNAFDLKWLVEAELKHCRIAMLGALGMIFPE-FYHLPNAAYSQTNPLAAVPSVGFAPVAQILLFMVVLEAI-SYQKINYNPSAPAGDFGFDPLGLAKNESARKRFALSEVKNGRLAMIACGGMIHHALITHQGPITQIQQGHFIGGDY 223
BLAST of Gvermi12790.t1 vs. uniprot
Match: A0A7S2ZNU9_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZNU9_9RHOD) HSP 1 Score: 197 bits (500), Expect = 2.650e-60 Identity = 115/210 (54.76%), Postives = 137/210 (65.24%), Query Frame = 0
Query: 3 AFVSGFAGLPATRASTFTGKSFAVHHAPVRTARYTMEASKSVPFLPKPAKLDGTLPGDVGFDPLGFSNAFDINFLREAEVKHGRICMLAIVGWVFPEAVYHLPNEIYSATNPLYA---VPKVGWLPAIQILLFIAACEAATSYKKVYEQKCEDPGNYGFDPLNLAGTPEKKKRQQTAEIKNGRLAMIAIGGAIHHALLTNVGLVEQIKSG 209
AFVSG + T+ S+F G P A TM+ S SVPFL LD + P FDPLGFS+ +D+ FL+EAE+KHGRICMLA++GWVFPE V HLP +++S TNPL A VPK G L QILLFI ACEA S+ K+Y + +PG YGFDPLNL + + AEIKNGRLAMIAIGG IH ALLT G+ QIKSG
Sbjct: 2 AFVSG---VTVTK-SSFHGSRVCAR-VPKSAATITMKGSASVPFLDSVKTLDPSAPAFADFDPLGFSSMYDLKFLQEAEIKHGRICMLAVLGWVFPEFV-HLPADVFSNTNPLAAFNQVPKAGLL---QILLFILACEAI-SFDKIYYTENWEPGVYGFDPLNLGKNDKSLAWYKAAEIKNGRLAMIAIGGFIHQALLTKQGVFAQIKSG 201
BLAST of Gvermi12790.t1 vs. uniprot
Match: Q9FEM0_GALSU (Light-harvesting protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=Q9FEM0_GALSU) HSP 1 Score: 194 bits (493), Expect = 3.910e-59 Identity = 97/178 (54.49%), Postives = 128/178 (71.91%), Query Frame = 0
Query: 31 VRTARYTMEASKSVPFLPKPAKLDGTLPGDVGFDPLGFSNAFDINFLREAEVKHGRICMLAIVGWVFPEAVYHLPNEIYSATNPLYAVPKVGWLPAIQILLFIAACEAATSYKKVYEQKCEDPGNYGFDPLNLAGTPEKKKRQQTAEIKNGRLAMIAIGGAIHHALLTNVGLVEQIKS 208
V + T SK++PF PKP +LD ++PG GFDPLGFS+ FD+ FL+EAE+KH RICMLA +GWVFPE +HLP+E++S T+PL A+ +V IQILL + A EA + K + + ++PG++GFDPL L G + KK QTAEIKNGRLAMIA+G H LLTN G++EQ+KS
Sbjct: 34 VHCSAETQRMSKAIPFFPKPERLDESMPGYAGFDPLGFSDKFDVKFLQEAEIKHCRICMLAALGWVFPE-FWHLPSEVFSNTSPLAALGQVPKFGLIQILLLVVALEAISLDKLEFHPE-KEPGDFGFDPLGL-GKGKSKKWMQTAEIKNGRLAMIAMGAFFHQNLLTNQGVIEQLKS 208
BLAST of Gvermi12790.t1 vs. uniprot
Match: M2X090_GALSU (Light-harvesting complex protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X090_GALSU) HSP 1 Score: 191 bits (486), Expect = 4.480e-58 Identity = 96/182 (52.75%), Postives = 130/182 (71.43%), Query Frame = 0
Query: 31 VRTARYTMEASKSVPFLPKPAKLDGTLPGDVGFDPLGFSNAFDINFLREAEVKHGRICMLAIVGWVFPEAVYHLPNEIYSATNPLYAVPKVGWLPAIQILLFIAACEAATSYKKVYEQKCEDPGNYGFDPLNLAGTPEKKKRQQTAEIKNGRLAMIAIGGAIHHALLTNVGLVEQIKSGQWF 212
+R + T SK++PF PKPA+LD ++PG GFDPLGFS+ FD+ FL+EAE+KH RICMLA +GWV PE +HLP+E++S T+PL A+ +V L IQILL + A EA + K + + ++PG++GFDPL L G KK QTAE+KNGRLAMIA+G H LLTN G+ EQ+++ +F
Sbjct: 34 LRCSIETQRMSKAIPFFPKPARLDESMPGYAGFDPLGFSDKFDVKFLQEAEIKHCRICMLAALGWVVPE-FWHLPSEVFSNTSPLAALGQVPKLGLIQILLLVLALEAISLDKITFHPE-KEPGDFGFDPLGL-GKGNAKKWMQTAELKNGRLAMIAMGAFFHQNLLTNQGIFEQLRTHNFF 212
BLAST of Gvermi12790.t1 vs. uniprot
Match: P93449_PORPP (Light-harvesting complex I polypeptide n=2 Tax=Porphyridium purpureum TaxID=35688 RepID=P93449_PORPP) HSP 1 Score: 179 bits (453), Expect = 4.780e-53 Identity = 99/216 (45.83%), Postives = 134/216 (62.04%), Query Frame = 0
Query: 3 AFVSGFAGL-PATRASTFTGKSFAVHHAPVRTARYTM--EASKSVPFLPKPAKLDGTLPGDVGFDPLGFSNAFDINFLREAEVKHGRICMLAIVGWVFPEAV----YHLPNEIYSATNPLYAVPKVGWLPAIQILLFIAACEAATSYKKVYEQKCEDPGNYGFDPLNLAGTPEKKKRQQTAEIKNGRLAMIAIGGAIHHALLTNVGLVEQIKSGQW 211
AFVSG G P + + KS PV+ R M E SKS+PFL KP LDG++ GDVGFDPLGFS+ +D+ FLREAE+KHGRICMLA +G+++PE + P ++ NPL AV + +QI+LF+ EA S+ KV+ K PG++ FDPL L K + + +E+KNGRLAMIA+GG IH LLT ++ Q+K+G +
Sbjct: 4 AFVSGGRGAGPVDKVAAIQSKSVKAA-VPVKAGRIAMMAEMSKSIPFLEKPKNLDGSMAGDVGFDPLGFSDKWDVKFLREAELKHGRICMLAALGFIYPEIMGGKSIPSPEGYFTELNPLKAVKAIPTAGLLQIVLFVMVLEAI-SWNKVFMDKTSAPGDFKFDPLGL-----KSPKMELSEVKNGRLAMIAVGGMIHQVLLTKQPILAQLKNGPY 212
BLAST of Gvermi12790.t1 vs. uniprot
Match: L1ID46_GUITC (Light-harvesting Chl a protein 3 n=4 Tax=Geminigeraceae TaxID=589343 RepID=L1ID46_GUITC) HSP 1 Score: 173 bits (439), Expect = 5.500e-51 Identity = 84/174 (48.28%), Postives = 115/174 (66.09%), Query Frame = 0
Query: 39 EASKSVPFLPKPAKLDGTLPGDVGFDPLGFSNAFDINFLREAEVKHGRICMLAIVGWVFPEAVYHLPNEIYSATNPLYAVPKVGWLPAIQILLFIAACEAATSYKKVYEQKCEDPGNYGFDPLNLAGTPEKKKRQQTAEIKNGRLAMIAIGGAIHHALLTNVGLVEQIKSGQWF 212
+ S+++PFL KP KLD ++PG GFDPLGFS+ +D+ +L+EAE+KHGRICMLA+VG PE + LP +TNPL A ++ + +QI +FI CE+ + K Y K PG+ GFDPL L P +K AE+KNGRLAMI GG +HHALLT +G +QI +++
Sbjct: 40 QMSEAIPFLEKPKKLDSSMPGYAGFDPLGFSDYYDVKWLQEAEIKHGRICMLAVVGMFHPE-IAKLPQFASFSTNPLEAFYQLSFAGWLQIFVFIGICESFSFEKVYYTDKA--PGDLGFDPLRLGSNPASRKYYANAEVKNGRLAMIGFGGMLHHALLTKMGPFQQIAEQKFY 210
BLAST of Gvermi12790.t1 vs. uniprot
Match: M2VTV2_GALSU (Light-harvesting complex protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VTV2_GALSU) HSP 1 Score: 172 bits (435), Expect = 2.890e-50 Identity = 92/175 (52.57%), Postives = 116/175 (66.29%), Query Frame = 0
Query: 41 SKSVPFLPKPAKLDGTLPGDVGFDPLGFSNAFDINFLREAEVKHGRICMLAIVGWVFPEAVYHLPNEIYS---ATNPLYAVPKVG-WLPAIQILLFIAACEAATSYKKV-----YEQKCEDPGNYGFDPLNLAGTPEKKKRQQTAEIKNGRLAMIAIGGAIHHALLTNVGLVEQI 206
S SVPFL +P LDGT PGDVGFDPL S+ DI +LRE+E+KHGRICMLA VG++ E V HLP E++S A + L+ VP G W QI LFI E + K+ + PG++GFDPL L P+ +KR + AEIKNGRLAM+A+GG IHH LLT+ G+VEQ+
Sbjct: 49 SLSVPFLERPKNLDGTAPGDVGFDPLYISDLLDIQWLRESEIKHGRICMLAAVGFIVQEFV-HLPGEVFSNKVAIDALFQVPSGGLW----QIFLFIGLLEFVMNKGKMTPLDMFSDPNRKPGDFGFDPLGLGKDPQARKRYEVAEIKNGRLAMLAVGGFIHHMLLTHQGVVEQL 218 The following BLAST results are available for this feature:
BLAST of Gvermi12790.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi12790.t1 ID=Gvermi12790.t1|Name=Gvermi12790.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=219bpback to top |