Gvermi12785.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12785.t1
Unique NameGvermi12785.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length182
Homology
BLAST of Gvermi12785.t1 vs. uniprot
Match: A0A2V3IHI0_9FLOR (ADP-ribosylation factor 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHI0_9FLOR)

HSP 1 Score: 344 bits (883), Expect = 1.260e-119
Identity = 173/179 (96.65%), Postives = 177/179 (98.88%), Query Frame = 0
Query:    1 MGAALSRLIASLFGDKEIRILILGLDNAGKTSILYRMKEGTFHSTVPTIGFNAEQIEIGKLKAQVWDLGGQESIRPYWRSYYQEQEAVIFVVDSCDKNRMQIAKRELMSIIEEDELKNAVVCVFANKQDMPEALAAAEIAEALGLSSIVDKKWTIIPTSALRGDGLKEGFEWISEAVQS 179
            MG  LSRLIASLFGDKEIRILILGLDNAGKTSILYRMKEGTFHSTVPTIGFNAEQ+EIGKLKAQVWDLGGQESIRPYWRSYYQEQEAVIFVVDSCDK+RMQ+AKRELMSIIEE+ELKNAVVCVFANKQDMPEALAAAEIAEALGLSSIVDKKWTIIPTSALRGDGLKEGFEWISEAVQS
Sbjct:    1 MGNVLSRLIASLFGDKEIRILILGLDNAGKTSILYRMKEGTFHSTVPTIGFNAEQLEIGKLKAQVWDLGGQESIRPYWRSYYQEQEAVIFVVDSCDKDRMQVAKRELMSIIEEEELKNAVVCVFANKQDMPEALAAAEIAEALGLSSIVDKKWTIIPTSALRGDGLKEGFEWISEAVQS 179          
BLAST of Gvermi12785.t1 vs. uniprot
Match: R7QNI9_CHOCR (Small GTP-binding protein of Sar1/Arf family n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QNI9_CHOCR)

HSP 1 Score: 333 bits (853), Expect = 4.730e-115
Identity = 164/181 (90.61%), Postives = 177/181 (97.79%), Query Frame = 0
Query:    1 MGAALSRLIASLFGDKEIRILILGLDNAGKTSILYRMKEGTFHSTVPTIGFNAEQIEIGKLKAQVWDLGGQESIRPYWRSYYQEQEAVIFVVDSCDKNRMQIAKRELMSIIEEDELKNAVVCVFANKQDMPEALAAAEIAEALGLSSIVDKKWTIIPTSALRGDGLKEGFEWISEAVQSNA 181
            MG ALSRLI+SLFG+KE+RILILGLDNAGKTSILYR+KEGTFHSTVPTIGFNAEQIE+GKLKAQVWDLGGQESIRPYWRSYYQEQEAVIFVVDSCD NRMQIAKRELM+IIEE+ELKNAVVCVFANKQDMPEAL+AAEIAEALGLSSIVDKKWTII TSALRGDGLKEGFEWIS+++++ A
Sbjct:    1 MGNALSRLISSLFGEKEVRILILGLDNAGKTSILYRLKEGTFHSTVPTIGFNAEQIEVGKLKAQVWDLGGQESIRPYWRSYYQEQEAVIFVVDSCDANRMQIAKRELMNIIEEEELKNAVVCVFANKQDMPEALSAAEIAEALGLSSIVDKKWTIIATSALRGDGLKEGFEWISDSIKTKA 181          
BLAST of Gvermi12785.t1 vs. uniprot
Match: A0A1X6NLY8_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NLY8_PORUM)

HSP 1 Score: 280 bits (716), Expect = 3.580e-94
Identity = 133/181 (73.48%), Postives = 159/181 (87.85%), Query Frame = 0
Query:    1 MGAALSRLIASLFGDKEIRILILGLDNAGKTSILYRMKEGTFHSTVPTIGFNAEQIEIGKLKAQVWDLGGQESIRPYWRSYYQEQEAVIFVVDSCDKNRMQIAKRELMSIIEEDELKNAVVCVFANKQDMPEALAAAEIAEALGLSSIVDKKWTIIPTSALRGDGLKEGFEWISEAVQSNA 181
            MG A S L+ASLFGDKE RILILGLDNAGKTSILYR+KEGTFHSTVPTIGFNAE +E+GKLKAQVWDLGGQESIRPYWRSY+  QEAV+FVVDSCD  R+ +A+RELM++++E+EL++A+VCV ANKQD PEA+ AA IAEAL L+SI D+KWTII  SALRG+GLKEGF+WI+  + + +
Sbjct:    1 MGNAFSWLLASLFGDKEARILILGLDNAGKTSILYRLKEGTFHSTVPTIGFNAETLEVGKLKAQVWDLGGQESIRPYWRSYFSHQEAVVFVVDSCDSARLDVARRELMAVLDEEELRSALVCVLANKQDRPEAMPAAAIAEALSLTSIRDRKWTIISASALRGEGLKEGFQWIAAELDNKS 181          
BLAST of Gvermi12785.t1 vs. uniprot
Match: M2X630_GALSU (ADP-ribosylation factor isoform 2 n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X630_GALSU)

HSP 1 Score: 249 bits (635), Expect = 1.010e-81
Identity = 119/180 (66.11%), Postives = 146/180 (81.11%), Query Frame = 0
Query:    1 MGAALSRLIASLFGDKEIRILILGLDNAGKTSILYRMKEGTFHSTVPTIGFNAEQIEIGKLKAQVWDLGGQESIRPYWRSYYQEQEAVIFVVDSCDKNRMQIAKRELMSIIEEDELKNAVVCVFANKQDMPEALAAAEIAEALGLSSIVDKKWTIIPTSALRGDGLKEGFEWISEAVQSN 180
            MG   SRL   LFG+KE+R+L++GLDNAGKT++LYR+KEG+   TVPTIGFN EQIE+  LK QVWDLGGQ SIRPYWRSYYQ+QEA+IFVVDS D+ R   AK EL+SI++E+ELKN V+ VFANKQD+PEA +AAE++ ALGL SI D+ WTII TSA +GDG+ EGFEW   A+ S+
Sbjct:    1 MGNIFSRLFQRLFGNKEVRVLMVGLDNAGKTTLLYRIKEGSMIKTVPTIGFNMEQIEVNNLKMQVWDLGGQTSIRPYWRSYYQKQEALIFVVDSNDRERFSTAKTELLSILQEEELKNTVIAVFANKQDLPEAASAAEVSLALGLDSIKDRTWTIISTSAAKGDGIAEGFEWFLNALFSH 180          
BLAST of Gvermi12785.t1 vs. uniprot
Match: A0A5J4YTK3_PORPP (ADP-ribosylation factor 1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YTK3_PORPP)

HSP 1 Score: 246 bits (628), Expect = 8.690e-81
Identity = 115/179 (64.25%), Postives = 145/179 (81.01%), Query Frame = 0
Query:    1 MGAALSRLIASLFGDKEIRILILGLDNAGKTSILYRMKEGTFHSTVPTIGFNAEQIEIGKLKAQVWDLGGQESIRPYWRSYYQEQEAVIFVVDSCDKNRMQIAKRELMSIIEEDELKNAVVCVFANKQDMPEALAAAEIAEALGLSSIVDKKWTIIPTSALRGDGLKEGFEWISEAVQS 179
            MG   S L+ASLFG +E+RIL+LGLDNAGKTSILYR+K+G    TVPTIGFN E +E   +  QVWDLGGQ SIRPYWRSYYQ QEAVIFVVDS D++RM IA+ EL S++EE+EL++A+VC+FANKQD PEA+  A++AEA+G++ + D+ WTII TSAL+G GL+EG  WIS  ++S
Sbjct:    1 MGGVFSSLLASLFGSREVRILMLGLDNAGKTSILYRLKDGAHIKTVPTIGFNVETLEFNNISMQVWDLGGQASIRPYWRSYYQRQEAVIFVVDSTDRDRMSIAQSELASLLEEEELEDAIVCIFANKQDAPEAMEVADVAEAMGVNRLQDRTWTIIGTSALKGTGLEEGLSWISNNLKS 179          
BLAST of Gvermi12785.t1 vs. uniprot
Match: C1E9M6_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E9M6_MICCC)

HSP 1 Score: 224 bits (572), Expect = 4.140e-72
Identity = 103/179 (57.54%), Postives = 136/179 (75.98%), Query Frame = 0
Query:    1 MGAALSRLIASLFGDKEIRILILGLDNAGKTSILYRMKEGTFHSTVPTIGFNAEQIEIGKLKAQVWDLGGQESIRPYWRSYYQEQEAVIFVVDSCDKNRMQIAKRELMSIIEEDELKNAVVCVFANKQDMPEALAAAEIAEALGLSSIVDKKWTIIPTSALRGDGLKEGFEWISEAVQS 179
            MG  +SR++A+ FGDKE RIL+LGLDNAGKT+ILYR++ G   ST+PTIGFN E +    +K QVWDLGGQ SIRPYWR YY    A+++VVDSCDK R+  +K EL  I+EEDEL+N ++ +FANKQD+PEA    EI E LGL+ + D++W I  TSAL+G+GL EG EW+S+ +++
Sbjct:    1 MGVLMSRVMAA-FGDKEARILVLGLDNAGKTTILYRLQVGAVVSTIPTIGFNVETVTFKNVKFQVWDLGGQTSIRPYWRCYYPNTTAIVYVVDSCDKERIPTSKEELQGILEEDELRNCIIMIFANKQDLPEAATEVEITEGLGLNGVKDRQWAIFKTSALKGEGLWEGMEWLSQQLKA 178          
BLAST of Gvermi12785.t1 vs. uniprot
Match: A9TNA9_PHYPA (Arl1-family small GTPase n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A9TNA9_PHYPA)

HSP 1 Score: 223 bits (567), Expect = 1.770e-71
Identity = 103/179 (57.54%), Postives = 141/179 (78.77%), Query Frame = 0
Query:    1 MGAALSRLIASLFGDKEIRILILGLDNAGKTSILYRMKEGTFHSTVPTIGFNAEQIEIGKLKAQVWDLGGQESIRPYWRSYYQEQEAVIFVVDSCDKNRMQIAKRELMSIIEEDELKNAVVCVFANKQDMPEALAAAEIAEALGLSSIVDKKWTIIPTSALRGDGLKEGFEWISEAVQS 179
            MG  +SRL+A+LFGDKE RIL+LGLDNAGKT+ILYR++ G   ST+PTIGFN E +    +K QVWDLGGQ SIRPYWR YY   +A+I+VVDS D +RM IA+ E  +I++E+ELK++V+ ++ANKQD+P AL AA ++EAL L +I +++W+I  TSA++GDGL EG +W+S  ++S
Sbjct:    1 MGIFVSRLLATLFGDKEARILVLGLDNAGKTTILYRLQVGEVVSTIPTIGFNVETVTYNNIKFQVWDLGGQTSIRPYWRCYYPNTQAIIYVVDSSDTDRMSIAQEEFHAILQEEELKDSVILIYANKQDLPGALDAAAVSEALNLHTIKNRQWSIFKTSAIKGDGLFEGLDWLSNTLKS 179          
BLAST of Gvermi12785.t1 vs. uniprot
Match: A0A6P4ZKX1_BRABE (ADP-ribosylation factor-like protein 1 n=2 Tax=Chordata TaxID=7711 RepID=A0A6P4ZKX1_BRABE)

HSP 1 Score: 222 bits (566), Expect = 2.430e-71
Identity = 105/178 (58.99%), Postives = 137/178 (76.97%), Query Frame = 0
Query:    1 MGAALSRLIASLFGDKEIRILILGLDNAGKTSILYRMKEGTFHSTVPTIGFNAEQIEIGKLKAQVWDLGGQESIRPYWRSYYQEQEAVIFVVDSCDKNRMQIAKRELMSIIEEDELKNAVVCVFANKQDMPEALAAAEIAEALGLSSIVDKKWTIIPTSALRGDGLKEGFEWISEAVQ 178
            MG   S L +SLFG +E+RILILGLD AGKT+ILYR++ G   +T+PTIGFN E +    LK QVWDLGGQ SIRPYWR YY   +A+I+VVDSCDK+RM I+K EL++++EE+ELK A++ VFANKQDM  AL   E+A  LGL++I D+KW I  TSA++G+GL+E  EW+ EA++
Sbjct:    1 MGGWFSSLFSSLFGQREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAIIYVVDSCDKDRMGISKSELVAMLEEEELKKAILLVFANKQDMEGALTPTEVANQLGLAAIKDRKWQIFKTSAIKGEGLEEAMEWLVEALK 178          
BLAST of Gvermi12785.t1 vs. uniprot
Match: A0A0M0KB00_9EUKA (ADP-ribosylation factor 3 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0KB00_9EUKA)

HSP 1 Score: 222 bits (566), Expect = 2.510e-71
Identity = 103/178 (57.87%), Postives = 141/178 (79.21%), Query Frame = 0
Query:    1 MGAALSRLIASLFGDKEIRILILGLDNAGKTSILYRMKEGTFHSTVPTIGFNAEQIEIGKLKAQVWDLGGQESIRPYWRSYYQEQEAVIFVVDSCDKNRMQIAKRELMSIIEEDELKNAVVCVFANKQDMPEALAAAEIAEALGLSSIVDKKWTIIPTSALRGDGLKEGFEWISEAVQ 178
            MGA  S+L A+L G++E+R+LILGLDNAGKT+ILY+++ G   +TVPTIGFN E ++   L+ QVWDLGGQ SIRPYWR YYQ   AVI+VVDS D +RM I+K+ELM+++EE+ELK+A + VFANKQD+P AL+  +IA+ LGL+S+  ++W I  TSA++GDGL EG +W+  A++
Sbjct:    1 MGAVFSKLFAALIGNREVRVLILGLDNAGKTTILYKLQMGEVVTTVPTIGFNVETVQYKNLRFQVWDLGGQTSIRPYWRCYYQNTNAVIYVVDSADHDRMGISKQELMAMLEEEELKDAALIVFANKQDLPNALSCEQIADRLGLASLKSRQWAIFKTSAVKGDGLFEGLDWLCAALR 178          
BLAST of Gvermi12785.t1 vs. uniprot
Match: A0A1Y2GTM6_9FUNG (ADP-ribosylation factor family-domain-containing protein n=2 Tax=Mortierellaceae TaxID=4854 RepID=A0A1Y2GTM6_9FUNG)

HSP 1 Score: 221 bits (563), Expect = 6.510e-71
Identity = 101/178 (56.74%), Postives = 142/178 (79.78%), Query Frame = 0
Query:    1 MGAALSRLIASLFGDKEIRILILGLDNAGKTSILYRMKEGTFHSTVPTIGFNAEQIEIGKLKAQVWDLGGQESIRPYWRSYYQEQEAVIFVVDSCDKNRMQIAKRELMSIIEEDELKNAVVCVFANKQDMPEALAAAEIAEALGLSSIVDKKWTIIPTSALRGDGLKEGFEWISEAVQ 178
            MG+  SR++  L+GDKE+RILILGLD AGKT+ILYR++ G   +T+PTIGFN E ++   +K QVWDLGGQ SIRPYWR YY   +AVI+VVDS D++R+  AK ELM+++EE+ELK+A + VFANKQDM  A+ AAE+++ALGLS++++++W+I  TSA++G+GL EG +W+   +Q
Sbjct:    1 MGSIFSRILGRLWGDKEVRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVQYKNIKFQVWDLGGQTSIRPYWRCYYANTDAVIYVVDSVDRDRVSTAKEELMAMLEEEELKDAALLVFANKQDMAGAMTAAEVSDALGLSTLMNRQWSIYKTSAVKGEGLTEGLDWLINIMQ 178          
The following BLAST results are available for this feature:
BLAST of Gvermi12785.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IHI0_9FLOR1.260e-11996.65ADP-ribosylation factor 1 n=1 Tax=Gracilariopsis c... [more]
R7QNI9_CHOCR4.730e-11590.61Small GTP-binding protein of Sar1/Arf family n=1 T... [more]
A0A1X6NLY8_PORUM3.580e-9473.48Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
M2X630_GALSU1.010e-8166.11ADP-ribosylation factor isoform 2 n=2 Tax=Galdieri... [more]
A0A5J4YTK3_PORPP8.690e-8164.25ADP-ribosylation factor 1 n=1 Tax=Porphyridium pur... [more]
C1E9M6_MICCC4.140e-7257.54Uncharacterized protein n=1 Tax=Micromonas commoda... [more]
A9TNA9_PHYPA1.770e-7157.54Arl1-family small GTPase n=3 Tax=Physcomitrium pat... [more]
A0A6P4ZKX1_BRABE2.430e-7158.99ADP-ribosylation factor-like protein 1 n=2 Tax=Cho... [more]
A0A0M0KB00_9EUKA2.510e-7157.87ADP-ribosylation factor 3 n=1 Tax=Chrysochromulina... [more]
A0A1Y2GTM6_9FUNG6.510e-7156.74ADP-ribosylation factor family-domain-containing p... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006689Small GTPase superfamily, ARF/SAR typePRINTSPR00328SAR1GTPBPcoord: 47..71
score: 40.47
coord: 74..99
score: 39.14
coord: 19..42
score: 52.21
coord: 119..140
score: 27.27
IPR006689Small GTPase superfamily, ARF/SAR typeSMARTSM00178sar_sub_1coord: 3..177
e-value: 1.4E-28
score: 110.9
IPR006689Small GTPase superfamily, ARF/SAR typePFAMPF00025Arfcoord: 6..176
e-value: 2.3E-68
score: 229.1
NoneNo IPR availableSMARTSM00177arf_sub_2coord: 1..181
e-value: 8.8E-77
score: 271.1
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 18..180
e-value: 4.1E-6
score: -33.4
NoneNo IPR availablePANTHERPTHR11711:SF372ADP-RIBOSYLATION FACTOR 3coord: 1..180
NoneNo IPR availablePROSITEPS51419RABcoord: 13..181
score: 10.649918
NoneNo IPR availablePROSITEPS51417ARFcoord: 11..177
score: 21.69795
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 16..172
e-value: 5.0E-22
score: 76.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 5..181
e-value: 1.7E-67
score: 228.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 14..178
IPR024156Small GTPase superfamily, ARF typePANTHERPTHR11711ADP RIBOSYLATION FACTOR-RELATEDcoord: 1..180

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1512788..1513670 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12785.t1Gvermi12785.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1512788..1513670 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12785.t1 ID=Gvermi12785.t1|Name=Gvermi12785.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=182bp
MGAALSRLIASLFGDKEIRILILGLDNAGKTSILYRMKEGTFHSTVPTIG
FNAEQIEIGKLKAQVWDLGGQESIRPYWRSYYQEQEAVIFVVDSCDKNRM
QIAKRELMSIIEEDELKNAVVCVFANKQDMPEALAAAEIAEALGLSSIVD
KKWTIIPTSALRGDGLKEGFEWISEAVQSNA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006689Small_GTPase_ARF/SAR
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase
IPR024156Small_GTPase_ARF