Gvermi12777.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12777.t1
Unique NameGvermi12777.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length516
Homology
BLAST of Gvermi12777.t1 vs. uniprot
Match: A0A2V3IEX7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEX7_9FLOR)

HSP 1 Score: 492 bits (1266), Expect = 3.130e-167
Identity = 286/529 (54.06%), Postives = 362/529 (68.43%), Query Frame = 0
Query:    1 MANPIVSDLPFTERIEMREKALAWISRDTGLQEFLIPDELTSDWSAEQKKLWTTTVIDRFMSAK-HQAGREARARVLARENASWLRRACVRLQQDLSDHRDLTRMAVLMETLWNEVSASFSDSKWAECSIMFDSALIALRVAYVWLYDKLENDDADLHSRKEVFETVVKSFFNAHAPTDDKNDKHSSNFRDLQRVWRVEFENYGKSDDFDSKLKRLEKSQNLLKVGIAVRKFLDTVNVDASWMWDMQKLEEDLKAGNVKRRKTPKNIEKPAPEPPEPESSGSYEPRAADSDFDIDTAEKVAGA-QNDDDEEEGSESDELMHGSMSQSKENGTAVRRSMRVAKGKVGRYTLGPGAKRGQKRRAAARRAALHFSESPTPSLSDDTPIIQRARAMKKAHARKHGNRDKHWNDDVAKIGHVMKRGTGPVSRP------GAPRTGISRGRVLKDVQRRTTRSKHNVTKPIEDEERPNDEFRYPGNDFDIGTDDIHGD-----LGDATTGGSI----PGAPVTFPDRKSRQIALL 512
            MANPIV+DLPF+ERIE+REK LAWISRD G+QEFLIPDELT++WS  +K LWTTTVIDRF+ AK +  G+ AR+RVLARENA W+RR CV +QQDL+DHR LTR AVL+E LWNEVSAS SD +WAECSIMFDSALI+LRVAYVWLYDK+EN+DADL SRK+ F TVV SFF   APTDD+ DKHSSNFRDLQRVWR EF+ Y  SDDF +KL+RL+++ NL+KV  AV +F+  +NVD SWMW+M++L++D+KAG VKR++  +                S+EP AADSDFDI+ AEKVA +  ND DE+  + SD+LM GSMSQ + NGT VRRSMRVA+ K  R+       RG+ +RAAA+RAAL FS SP+PS SD+ P+  R RAMK      H  +  + +D+    G        P   P      G  RTGISR RV K+ +R   + +   ++ +    + ND  R+     D   DD+  D      G A  G ++    P AP++FP+R+SR  A+L
Sbjct:    1 MANPIVTDLPFSERIELREKVLAWISRDVGIQEFLIPDELTTEWSEAEKSLWTTTVIDRFIRAKTNPFGKAARSRVLARENAGWVRRGCVAMQQDLADHRLLTRTAVLLEALWNEVSASLSDLQWAECSIMFDSALISLRVAYVWLYDKIENEDADLESRKQTFTTVVDSFFGGIAPTDDRTDKHSSNFRDLQRVWRTEFDKYTTSDDFGAKLERLQETHNLIKVAAAVGRFMSAINVDPSWMWEMKQLDDDVKAGYVKRKRKQRXXXXXXXXXXXXXXXESFEPHAADSDFDIEIAEKVAASPDNDIDEDMSASSDDLMRGSMSQRRNNGTEVRRSMRVAQAKAHRFRPSREDFRGRHKRAAAKRAALRFSHSPSPSGSDE-PL--RVRAMK------HNPKGSYEDDEEKPTGKTSADRRTPRYEPRTARRRGMGRTGISRSRVTKE-KRTGPKGRRRTSRLLA---KANDRERFEDEAADDYADDVAVDPDEMVQGLAAHGSNVTKVAPEAPISFPNRRSRLAAML 516          
BLAST of Gvermi12777.t1 vs. uniprot
Match: R7QPN4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPN4_CHOCR)

HSP 1 Score: 210 bits (535), Expect = 8.540e-59
Identity = 103/265 (38.87%), Postives = 170/265 (64.15%), Query Frame = 0
Query:    1 MANPIVSDLPFTERIEMREKALAWISRDTGLQEFLIPDELTSDWSAEQKKLWTTTVIDRFMSAKHQAGR-EARARVLARENASWLRRACVRLQQDLSDHRDLTRMAVLMETLWNEVSASFSDSK-WAECSIMFDSALIALRVAYVWLYDKLEND--DADLHSRKEVFETVVKSFFNAHAPTDDKNDKHSSNFRDLQRVWRVEFENYGKSDD--FDSKLKRLEKSQNLLKVGIAVRKFLDTVNVDASWMWDMQKLEEDLKAGNVKR 259
            M + + S+LPF E + +RE  LAWISRD GL+EFLIPD+L+S W+ EQK+ WT  V++++M      G    R R++A E AS LRR CV L++  + HRD+ + A ++ETLW+ +S +  D   W +CS+ FD+ALI++R+AY+W+Y   E +       +RK VF+  V+SFF    P D   DKHS NF++L   WR E ++Y ++++  F+ ++K++E+  +       + KF+   +++ SWM  +Q+++++++AG  K+
Sbjct:    1 MPSSVPSELPFGELMTLRENVLAWISRDAGLEEFLIPDKLSSKWTKEQKETWTAAVVEKYMHLDDSEGSVNMRKRIVASETASALRRCCVLLREGTASHRDVIKTAAVLETLWDSISPTMGDDAVWVKCSLTFDTALISIRLAYLWIYLNAEANGKSTSFETRKAVFKECVESFFVIGGPADSGKDKHSVNFKELVETWREELKSYAENEEEEFELRVKQVEEGYSREATVTRIEKFMGLADMNGSWMLHVQQMDKEIEAGMWKK 265          
The following BLAST results are available for this feature:
BLAST of Gvermi12777.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IEX7_9FLOR3.130e-16754.06Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QPN4_CHOCR8.540e-5938.87Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 254..271
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 317..331
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 287..302
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 254..515
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 437..482
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 400..414

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1497522..1499069 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12777.t1Gvermi12777.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1497522..1499069 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12777.t1 ID=Gvermi12777.t1|Name=Gvermi12777.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=516bp
MANPIVSDLPFTERIEMREKALAWISRDTGLQEFLIPDELTSDWSAEQKK
LWTTTVIDRFMSAKHQAGREARARVLARENASWLRRACVRLQQDLSDHRD
LTRMAVLMETLWNEVSASFSDSKWAECSIMFDSALIALRVAYVWLYDKLE
NDDADLHSRKEVFETVVKSFFNAHAPTDDKNDKHSSNFRDLQRVWRVEFE
NYGKSDDFDSKLKRLEKSQNLLKVGIAVRKFLDTVNVDASWMWDMQKLEE
DLKAGNVKRRKTPKNIEKPAPEPPEPESSGSYEPRAADSDFDIDTAEKVA
GAQNDDDEEEGSESDELMHGSMSQSKENGTAVRRSMRVAKGKVGRYTLGP
GAKRGQKRRAAARRAALHFSESPTPSLSDDTPIIQRARAMKKAHARKHGN
RDKHWNDDVAKIGHVMKRGTGPVSRPGAPRTGISRGRVLKDVQRRTTRSK
HNVTKPIEDEERPNDEFRYPGNDFDIGTDDIHGDLGDATTGGSIPGAPVT
FPDRKSRQIALLDSQ*
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