Gvermi12772.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12772.t1
Unique NameGvermi12772.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length916
Homology
BLAST of Gvermi12772.t1 vs. uniprot
Match: A0A2V3IEW5_9FLOR (DNA primase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEW5_9FLOR)

HSP 1 Score: 1209 bits (3128), Expect = 0.000e+0
Identity = 598/908 (65.86%), Postives = 732/908 (80.62%), Query Frame = 0
Query:    2 ISNRHGSTRLPLFIPLALPRSSPPARRKFLVCQRTSPKQLWGRVRKAIPLSQAFADRYGDSALISTGPERFKLVCPFHNDKNPSLHISDDLGTFHCFGCGASGSIIDLEQLASGHHSIAHALKSXXXXXXXXXXILQTASFKTPSGSPEILDEPKPSQRSVPQQ-VPRRIVVTHKAIAYDVLRDATHVYQLALWDPSTSQGLKYFTEERKLSAATLRAFACGFAPTSPQADFLLRKLREMGYPPEHLAIAGVARSPRDGLIHDLFRDRVIAPIRDIQGKPISLAGRALPYAPKSAAKYINGPETYLFKKKTVLFGADIAKSAPSAKAKFGYVIVVEGYMDVMTMFERTQGRIACVATMGTGVTLEQLHAAYKLLDDCVDGKVILNFDNDEAGIKSLNRICETVVLEARCAHAIYIALPPSPVKDADEFMTEAGTPNEYMTYLLDAAKPWYEWYGDRIVKREIERVLDPNTDVNVEVDLGITKADMKGIGASQASHEIDLMLSKFLRRQRDDLLASVGGQPQAPEF-SVDPPKRAPCSKEVLDELATVVNSAARTLPGLNVSALVHSWTDLLSLGEPTKLLPMFAYVIKKYRELSKPWRHLSIPVQVQWLPPPPWIEKQLEKMKKKPRSLGTITDPNSQPQKLEFTPKELKRIRERIRFQEEYILPELRARRCDRSKMTKAAPRRAAEELILRALIFAEEIDRIDALEILIDAIIRCAEKKLPFWTSKAREGFFEYLSQLEGAASPEEMAAYLEESDWWCKEIEDLFIPIEEEVDPEWAGLRRLEINHPIDMVRTCALSIERMAGMVGSRQAIEKSGDVMQR-VAEAASLASNAGGSQQDIMKKTQELLAKEMPSREELDRGNFLNPVEAAERDKEMEKVNAKLLDAARKAKIFKDLKSGQISPPAWAD 906
            +++R+ S R+  F+   LP      +RK +VC++ S KQLWGRV+KA+PLS+AFADRYGDSALISTGP+R+KLVCPFHNDKNPSLHI+DD+GTFHCFGCGASGSIIDLEQLA+GH SIAHALKS           L TASFKTP GSPE ++E       V QQ +PRR+++THKAIAYDVLRDAT VYQ  LWDP+   GL+YF  ERKLSA TLRAFACG+AP S QADFLL  LR+MGYP EHLAIAGVARSPR+ L  D+FRDRVI PIRDI+G+ I+LAGRALP A K+A KYIN PET+LFKKK  LFGADIAK+APSA +K GY++VVEGYMDVMT+F+RTQGRIACVATMGT VTLEQLH+AY+LL DC DG+VI+NFDNDEAGIK++ RICE+V+L A CAHAIY+ALPPSPVKDADEFM E GTPNEY+TYLLD A+PWYEWYG+ IV++E+ER+LDP+TD NV  DLGIT  DM  +G +Q+  + D +L+ F+RRQRDD+LAS G  P+  E   V   KRAPCS++VLDELA+VVNSA RTLPGLNVSALVHSW+D LSLGEP KL+ M+ Y++K+Y+ELS+PWRHLS+PVQVQWLP PPWI K+L+K KK  +   +++    + + ++ +PKELKRIRERI+FQE YILP L+ RRC++SK+TK+APRRAAEE ILR LIFAEEIDRIDA+EILI AIIRCAEKKLPFWTSK RE  FEY+S+LEGA + EEM AYLEE DWWC+E+E++F PI+ E DPEWA +R+LEI+HPID+V+ CA S+ERMAGMV SR AIE+SGD+MQR V E A+ AS    S++D +  +++L+ +     + +DR  +LNP EAAER++ M++VN +L  A  K K+ +D++SG  SPP   D
Sbjct:    3 LNDRNRSRRMGCFMTPVLPFPRVQVKRKPIVCKQGSAKQLWGRVKKAVPLSRAFADRYGDSALISTGPQRYKLVCPFHNDKNPSLHINDDMGTFHCFGCGASGSIIDLEQLAAGHRSIAHALKSLASRYQPIANALLTASFKTPQGSPEEIEEASAENEPVQQQKIPRRVIITHKAIAYDVLRDATLVYQRVLWDPAAPAGLQYFMRERKLSAPTLRAFACGYAPPSTQADFLLCTLRDMGYPAEHLAIAGVARSPRENLCFDIFRDRVITPIRDIKGQTIALAGRALPNASKNAPKYINSPETFLFKKKQTLFGADIAKTAPSANSKNGYIVVVEGYMDVMTIFDRTQGRIACVATMGTAVTLEQLHSAYQLLTDCADGRVIVNFDNDEAGIKAVQRICESVILGAACAHAIYVALPPSPVKDADEFMREVGTPNEYVTYLLDTARPWYEWYGNTIVQKEVERLLDPSTDTNVADDLGITPEDMGSVGIAQSGQQFDFILADFMRRQRDDMLASFGAPPEVDEICGVKKLKRAPCSRKVLDELASVVNSANRTLPGLNVSALVHSWSDSLSLGEPAKLMRMYTYILKRYKELSRPWRHLSVPVQVQWLPTPPWILKELKKSKKIAQKKASLSSMGEKEEDIKVSPKELKRIRERIQFQERYILPGLKERRCEQSKLTKSAPRRAAEEFILRTLIFAEEIDRIDAMEILIGAIIRCAEKKLPFWTSKERESLFEYISELEGAPTVEEMVAYLEEMDWWCQEVENMFTPIDVETDPEWAAIRQLEIDHPIDVVKACAYSVERMAGMVASRNAIEESGDIMQRLVQEQAAAASTDDASREDFVMHSRQLIDRSNELSKSIDRTAYLNPEEAAEREEAMKEVNTRLRKAELKEKLLEDIESGDFSPPERRD 910          
BLAST of Gvermi12772.t1 vs. uniprot
Match: R7QPD4_CHOCR (Toprim domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPD4_CHOCR)

HSP 1 Score: 606 bits (1563), Expect = 4.600e-200
Identity = 334/852 (39.20%), Postives = 507/852 (59.51%), Query Frame = 0
Query:   31 LVCQRTSPKQLWGRVRKAIPLSQAFADRYGDSALISTGPERFKLVCPFHNDKNPSLHISDDLGTFHCFGCGASGSIIDLEQLASGHHSIAHALKSXXXXXXXXXXILQTASFKTPSGSPEILDEPKPSQRSVPQQVPRRIVVTHKAIAYDVLRDATHVYQLALWDPSTSQGLKYFTEERKLSAATLRAFACGFAPTSPQADFLLRKLREMGYPPEHLAIAGVARSPRD--GLIHDLFRDRVIAPIRDIQGKPISLAGRALPYAPKSA--AKYINGPETYLFKKKTVLFGADIAKSAPSAKA----------KFGYVIVVEGYMDVMTMFERTQGRIACVATMGTGVTLEQLHAAYKLLDDCVDGKVILNFDNDEAGIKSLNRICETVVLEARCAHAIYIALPPSPVKDADEFMTEAGTPNEYMTYLLDAAKPWYEWYGDRIVKREIERVLDPNTDVNVEVDLGITKA-DMKGIGASQASHEIDLMLSKFLRRQRDDLLASVGGQPQAPEFSVDPPKRAPCSKEVLDELATVVNSAARTLPGLNVSALVHSWTDLLSLGEPTKLLPMFAYVIKKYRELSKPWRHLSIPVQVQWLPPPPWIEKQLEKMKKKP--RSLGTITDPNSQPQKLEFTPKE-LKRIRERIRFQEEYILPELRARRCDRSKMTKAAPRRAAEELILRALIFAEEIDRIDALEILIDAIIRCAEKKLPFWTSKAREGFFEYLSQLEGAASPEEMAAYLEESDWWCKEIEDLFIPIEEEVDPEWAGLRRLEINHPIDMVRTCALSIERMAGMVGSRQAIEKSGDVMQRVAEAASLASNAGGSQQDIMKKTQELLAKEMPSREELDRGNFLNP 864
            L C   S   ++ +++  IPLS+AF+D  G SAL+ +GP  FK  CPFH D++PSLHI      FHCFGCGA GSIID E L +G  S+++AL+S          ++ T    TP  +P    E    Q   P +   R +V   +IA +V R    +Y+ ALW     +  +Y TE R LS  TL+ + CG+AP   + D+++R L ++G+P EH  I GVAR  ++   +I+D+FRDRV+ PIR+IQG+ I+ AGR +  A ++A   KY+NGPET +FKK+  LFG DIAK APS K           K G+V++VEGYMDVMT++E T G  ACVATMGT ++ +QL AAY LL+D +DGKVI+NFD D+AGI +  R+C++V+ E+ CAH +YIA  P  +KD DEF++  G+  +Y+ Y+ + A PWY+W   RI+  E +   D +     + D  + K+ + + +    +    D  L + ++++ D+LL + GG P+  +   +       SK+V++ LA ++ SA R++PGLN  A+VH+W+D L       L P++  ++ +  +LS  W  +S   QV+W+ PPPWI + +   +++   ++ G   D      +   T K  +++   R++ QE + LP +   + D  KM + APRRAAEE +LR LIFA E+DR+DALE L++ +I C ++ LPFWTSKARE  F+YL +++G  +  EMAAY+E+ +WW  +IE LF P E + D     LR LE  +P+ +V   A  +  MAG V S  A++++GD+      A  +   A   +QD M    ELLA+++  ++ + +  +LNP
Sbjct:   60 LPCASASNPSVFDQIKHQIPLSRAFSDLLGPSALVRSGPTDFKACCPFHADRSPSLHIYSAQNRFHCFGCGAGGSIIDFETLRTGDSSVSNALRSLAARYPQVARLITT----TPQNAPTATAEQP--QEGTPVRKQWRAIVARTSIAREVQRTCAQLYEKALWQEHAVEARRYMTEVRGLSEETLKLYGCGYAPG--RGDWMVRSLEDLGHPKEHAVIGGVARRGKEKSDVIYDIFRDRVVTPIRNIQGETIAQAGRIVGDAQRAAWVPKYVNGPETEIFKKRDALFGIDIAKMAPSVKVEWEDKERGVGKLGFVLMVEGYMDVMTVYEHTNGYAACVATMGTSMSAKQLEAAYDLLEDPMDGKVIINFDTDDAGIAAAERLCDSVIPESECAHVVYIATLPPDIKDPDEFLSAHGSGEDYIDYVQEVALPWYDWRARRIIIEE-QLSSDESAAEEGDSDSDVGKSPEREMVDLDSSDQSFDFQLGEIMKKRADELLVAFGGPPELMDKKENEDAMPSISKDVVESLAQILESAQRSIPGLNSGAVVHAWSDSLCRSRVLALSPLYRKILTRAEQLSSSWVKMSPAAQVKWMSPPPWIVEDITGTRRRNIRKNAGQTADGLEMDWETFSTDKRRVEKSISRLKAQEAHFLPYIEKEQSDDVKMLRVAPRRAAEEAVLRCLIFASEMDRLDALEKLLEVMIWCEQRDLPFWTSKARESLFDYLGEVDGPVTRAEMAAYVEDEEWWGTDIEALFFPSEGK-DIALDALRALERANPVAVVEATARGVAEMAGKVASGLALKETGDI------AKKMLDKADRGEQDEM---DELLARQISLKKAVSKMKYLNP 892          
BLAST of Gvermi12772.t1 vs. uniprot
Match: A0A2T2RXG0_9CYAN (DNA primase n=1 Tax=Cyanobacteria bacterium QS_8_64_29 TaxID=1919134 RepID=A0A2T2RXG0_9CYAN)

HSP 1 Score: 170 bits (431), Expect = 1.160e-40
Identity = 130/396 (32.83%), Postives = 197/396 (49.75%), Query Frame = 0
Query:   75 VCPFHNDKNPSLHISDDLGTFHCFGCGASGS----IIDLEQLASGHHSIAHALKSXXXXXXXXXXILQTASFKTPSGSPEILDEPKPSQRSVPQQVPRRIVVTHKAIAYDVLRDATHVYQLALWDPSTSQGLKYFTEERKLSAATLRAFACGFAPTSPQADFLLRKL-REMGYPPEHLAIAGVARSPRDGL-IHDLFRDRVIAPIRDIQGKPISLAGRALPYAPKSAAKYINGPETYLFKKKTVLFGADIAKSAPSAKAKFGYVIVVEGYMDVMTMFERTQGRIACVATMGTGVTLEQLHAAYKLLDDCVDGKVILNFDNDEAGIKSLNRIC---ETVVLEARCAHAIYIALPPSPVKDADEFMTEAGTPNEYMTYLLDAAKPWYEWYGDRIVKRE 461
            +CPFH +K PS  +S     ++CFGCGA G     +++ EQ + G   +A A +                 ++ P  S E      P Q+   QQ+ R++  +H+   Y+V+  A   YQ AL  P     L Y   +R+LS AT+ AF  G+AP   +   L R L ++ GYP   +  AG+ +  + G   +D FRDR+I PIRD+QG+PI+L  R L    +   KY+N P+T LF K+  LF  D A+      AK    IVVEGY D + +     G    VA++GT ++ +QL    +LL      ++ LNFD D AG  +  R     E++V   +    + + LP    KDAD+F+      +E    L+  A  W +W  +R+++RE
Sbjct:   40 LCPFHEEKTPSFTVSPSKQLYYCFGCGAGGGALKFLMEWEQQSFGEAVLALAQR-----------------YQVPVKSLE------PEQQ---QQLQRQL--SHRERLYEVVALAASFYQHALHQPQGEAALAYLRSQRQLSDATIEAFQLGYAPAGWET--LYRYLVQQKGYPLALVEEAGLIQQRKSGSGYYDRFRDRLIIPIRDVQGRPIALGSRTLG---EGEPKYLNSPDTPLFDKRKTLFALDRARGEI---AKRDGAIVVEGYFDAIALHAAGIGN--AVASLGTALSQDQLR---QLLRYTESKQIALNFDADAAGASATERAIGAIESLVYSGQVQLRV-LNLPDG--KDADDFLQSHPQASERFRELVAQAPLWIDWQIERLLQRE 391          
BLAST of Gvermi12772.t1 vs. uniprot
Match: A0A0M1JKV3_9CYAN (DNA primase n=1 Tax=Planktothricoides sp. SR001 TaxID=1705388 RepID=A0A0M1JKV3_9CYAN)

HSP 1 Score: 171 bits (432), Expect = 1.660e-40
Identity = 130/414 (31.40%), Postives = 198/414 (47.83%), Query Frame = 0
Query:   75 VCPFHNDKNPSLHISDDLGTFHCFGCGASGSIIDLEQLASGHHSIAHALKSXXXXXXXXXXILQTAS-FKTPSGSPEILDEPKPSQRSVPQQVPRRIVVTHKAIAYDVLRDATHVYQLALWDPSTSQGLKYFTEERKLSAATLRAFACGFAPTSPQA--DFLLRKLREMGYPPEHLAIAGVARSPRDGL-IHDLFRDRVIAPIRDIQGKPISLAGRALPYAPKSAAKYINGPETYLFKKKTVLFGADIAKSAPSAKAKFGYVIVVEGYMDVMTMFERTQGRIACVATMGTGVTLEQLHAAYKLLDDCVDGKVILNFDNDEAGIKSLNRICETVVLEARCAHAIYIALPPSPVKDADEFMTEAGTPNEYMTYLLDAAKPWYEWYGDRIVKREIERVLDPNTDVNVEVDLGITKAD 484
            +CPFH +K PS  +S     ++CFGCGA G+ I    +  G HS A               +L  A  ++ P  + E      P +R   Q+  R++ +  +   Y++L  A   YQ  L  P  SQ L Y   +R+L   T++ F  G+AP + +    +L+++ R   YP E +  AG+ +  + G   +D FRDR++ PI D+QG+ I   GR L        KY+N PET +F K   LF  D AK+A     +    +VVEGY D + +     G    VA++GT ++L Q+    +LL      +++LNFD D AGIK+  R    +   A         L     KDADEF+  +G+P  Y   LLDA   W  W  ++I+K +  +  D       E+   +T+ D
Sbjct:   40 LCPFHEEKTPSFTVSPSKQMYYCFGCGAGGNAIKF-LMEIGKHSFAEV-------------VLDLAKRYQVPIKTLE------PEER---QEFQRQLSMREQL--YEILAIAASFYQHTLRQPQGSQALDYLKSKRQLGENTIQQFQLGYAPPTWETLYSYLVQQKR---YPTELVEQAGLIKPRKSGGGYYDQFRDRLMIPIHDVQGRVIGFGGRTLG---DDQPKYLNSPETRVFDKGKTLFALDKAKTAIGQADQ---AVVVEGYFDAIAL--HAAGITNVVASLGTALSLHQVR---QLLRYTESKQIVLNFDADVAGIKAAERAIGEIANLAYSGEIQLRILTIPDGKDADEFLKTSGSPEPYKQLLLDAPL-WLNWQIEQILKGKNLQAADEYQQAYREILQLLTQLD 413          
BLAST of Gvermi12772.t1 vs. uniprot
Match: N1UWT2_9MICC (DNA primase (Fragment) n=1 Tax=Arthrobacter crystallopoietes BAB-32 TaxID=1246476 RepID=N1UWT2_9MICC)

HSP 1 Score: 164 bits (416), Expect = 4.590e-40
Identity = 130/402 (32.34%), Postives = 184/402 (45.77%), Query Frame = 0
Query:   60 GDSALISTGPERFKLVCPFHNDKNPSLHISDDLGTFHCFGCGASGSIIDLEQLASGHHSIAHALKSXXXXXXXXXXILQTASFKTPSGSPEILDEPKPSQRSVPQQVPRRIVVTHKAIAYDVLRDATHVYQLALWDPSTSQGLKYFTEERKLSAATLRAFACGFAPTSPQADFLLRKLREMGYPPEHLAIAGVARSPRDGLIHDLFRDRVIAPIRDIQGKPISLAGRALPYAPKSAAKYINGPETYLFKKKTVLFGADIAKSAPSAKAKFGYVIVVEGYMDVMTMFERTQGRIACVATMGTGVTLEQLHAAYKLL-DDCVDGKVILNFDNDEAGIKSLNRICETVVLEARCAHAIYIALPPSPVKDADEFMTEAGTPNEYMTYLLDAAKPWYEWYGDRIVKR 460
            G   L S G   FK +CPFH++++PS H+   +GT+HCFGCG  G +I   Q    H + A  ++           I  T  ++     P   D  K           +R++  HK         A   ++  L  P  +   + F E R   AA    F  G+AP     D LL+ L   G+  E L + G+      G I+D FR R+I PIRDI G+ I    R L Y      KY+N PET L+KK  VL+G D+AK   +   +   ++VVEGY DVM       G    VAT GT    + +  A +LL DD   G+VI  FD DEAG K+  R  E    + R     ++A+ P+     D  MT  G P   +  L+ + +P +E+     +KR
Sbjct:   25 GYVTLKSAGIGSFKGLCPFHDERSPSFHVRPQVGTYHCFGCGEGGDVISFVQKMD-HTTFAETVEKLAHR------INYTLRYEDGGTGPRREDVGKR----------QRLLDAHKV--------AAEFFRAQLATPGAAAA-RQFLEGRGFDAAAAEHFGVGYAPQG--WDSLLKHLAGRGFQQEELKLTGMFSEGNRG-IYDRFRGRLIWPIRDIAGETIGFGARKL-YDDDQGPKYLNTPETALYKKSQVLYGIDLAKRDIARNRQ---LVVVEGYTDVMAC--HLAGITTAVATCGTAFGADHIKIARRLLSDDGTGGEVIFTFDGDEAGQKAALRAFEE---DQRFIAQTFVAVEPTGADPCDLRMTR-GEPA--VRELISSRRPLFEFAIKATLKR 385          
BLAST of Gvermi12772.t1 vs. uniprot
Match: A0A4P7ZU95_9SYNE (DNA primase n=4 Tax=Synechococcaceae TaxID=1890426 RepID=A0A4P7ZU95_9SYNE)

HSP 1 Score: 167 bits (423), Expect = 2.010e-39
Identity = 151/442 (34.16%), Postives = 215/442 (48.64%), Query Frame = 0
Query:   37 SPKQLWGRVRKAIPLSQAFADRYGDSALISTGPERFKLVCPFHNDKNPSLHISDDLGTFHCFGCGASGSIID-LEQLASGHHSIAHALKSXXXXXXXXXXILQTA-SFKTPSGSPEILDEPKPSQRSVPQQVPRRIVVTHKAIAYDVLRDATHVYQLALWDPSTSQGLKYFTEERKLSAATLRAFACGFAPTSPQADFLLRKLREM-GYPPEHLAIAG--VARSPRDGLIHDLFRDRVIAPIRDIQGKPISLAGRALPYAPKSAAKYINGPETYLFKKKTVLFGADIAKSAPSAKAKFGYVIVVEGYMDVMTMFERTQGRIACVATMGTGVTLEQLHAAYKLLDDCVDGK-VILNFDNDEAGIKSLNRICETVV-------LEARCAHAIYIALPPSPVKDADEFMTEAGTPNEYMTYLLDAAKPWYEWYGDRIVK-REIER 464
            S  +L  R  +A+       D  G+  ++      F  VCPFH+DK+PS+ +S     ++CF CGA G+ I  L +L     S                 +L+ A  ++ P    E L+ P+  Q  + QQ+ RR  + HK     VL  A   ++  L  P  +  L Y  E+R LS  TL +F  G+AP   + D LL  L+++ G+ PE L  AG  V R   DG  +D FR RV+ PI D QG+ I   GR+L        KY+N PET +F+K   LFG D    A +A  K    +VVEGY DV+ +     G    VA +GT ++ +Q+    +    C DGK +ILNFD D AG+++  R    V        LE R  H     LP    KD DEF+ E G   EY + LLD A  W +W  D++++ R++ R
Sbjct:    2 SAPRLHPRTIEAVKERADIVDVVGEHVVLKKKGREFVGVCPFHDDKSPSMTVSPAKQFYYCFSCGAGGNAIKFLMELQRQSFS---------------DVVLELARKYQLPV---ETLEGPQ--QERLRQQLSRRDQL-HK-----VLSLAAGWFRSQLRSPDGASALAYLREQRGLSETTLESFGLGYAPE--RWDGLLSHLQQVEGFAPELLEAAGLVVPRRGGDGF-YDRFRHRVMVPICDRQGRIIGFGGRSLD---GGEPKYLNSPETEVFEKGKHLFGLD---KAVNAIRKDDRAVVVEGYFDVIAL--HAAGITNAVAALGTALSSQQITQLCR----CCDGKRLILNFDTDRAGVRAAQRAIGEVEQLALQGQLELRVLH-----LPAG--KDPDEFLKEHGA-GEYRS-LLDQAPLWLDWQIDQVLEGRDLAR 393          
BLAST of Gvermi12772.t1 vs. uniprot
Match: UPI000CD0FDA2 (DNA primase n=1 Tax=Tabrizicola aquatica TaxID=909926 RepID=UPI000CD0FDA2)

HSP 1 Score: 166 bits (419), Expect = 3.530e-39
Identity = 126/439 (28.70%), Postives = 210/439 (47.84%), Query Frame = 0
Query:   72 FKLVCPFHNDKNPSLHISDDLGTFHCFGCGASGSIIDLEQLASGHHSIAHALKSXXXXXXXXXXILQTASFKTPSGSPEILDEPKPSQRSVPQQVPRRIVVTHKAIAYDVLRDATHVYQLALWDPSTSQGLKYFTEERKLSAATLRAFACGFAPTSPQADFLLRKLREMGYPPEHLAIAGVARSPRDGLIHDLFRDRVIAPIRDIQGKPISLAGRALPYAPKSAAKYINGPETYLFKKKTVLFGADIAKSAPSAKAKFGYVIVVEGYMDVMTMFERTQGRIACVATMGTGVTLEQLHAAYKLLDDCVDGKVILNFDNDEAGIKSLNRICETVVLEARCAHAIYIALPPSPVKDADEFMTEAGTPNEYMTYLLDAAKPWYE--WYG----------------DRIVKREIERVLDPNTDVNVEVDLGITKADMKGIGASQ 492
            F   CPFH +K+ S H+ D  G ++CFGC A G  +   +  S +     A++           + + A  + P+  P+  +  +  +R+  QQV               + +A   ++L L   + ++   Y +++R+LS A    +  G+AP+S  A  L   L   G  P+ +  +G+     DG ++D FR R+I PIRD +G+PISL GR+L   P + AKY+NGPET LF K   LF    A+ A + K K   +IV EGYMDV+ + E   G  A +A +GT VT EQL   +++ D+      I+  D D AG+K+  R+ +  +       A+  A+ P  + D D+ +   G P   M  +LD A+P  +  W                  D+ ++  + R+ DP+   +   ++   + ++ G G ++
Sbjct:   39 FWAPCPFHQEKSASFHVDDRKGFYYCFGCHAKGDAVTFVK-ESENLGFMEAVE----------ILAREAGMQMPARDPKAAE--RADRRTQLQQV---------------MDEAVKFFRLQLKTSAGAEARAYLSQKRRLSEAAWDRWDIGWAPSSRHA--LKDALAAKGVAPDLMVASGLIAKGDDGSLYDRFRARIIFPIRDPRGRPISLGGRSLD--PNAQAKYLNGPETELFDKGRSLFNHSPAREA-AGKGK--PLIVAEGYMDVIALSEA--GFTAAIAPLGTAVTDEQLRMIWRIADE-----PIIALDGDNAGLKAAQRVIDLALPLLEAGKALRFAILPGGM-DPDDLIKAQGAPA--MQAVLDQARPMVQLLWQRETEGRVFDSPERRAALDKTLRGHLARIADPSIRSHYAEEMKRLRLELFGTGQAR 432          
BLAST of Gvermi12772.t1 vs. uniprot
Match: A0A4P5VHN1_9CYAN (DNA primase n=1 Tax=Cyanobium sp. TaxID=2164130 RepID=A0A4P5VHN1_9CYAN)

HSP 1 Score: 166 bits (420), Expect = 4.400e-39
Identity = 154/490 (31.43%), Postives = 227/490 (46.33%), Query Frame = 0
Query:   40 QLWGRVRKAIPLSQAFADRYGDSALISTGPERFKLVCPFHNDKNPSLHISDDLGTFHCFGCGASGSII----DLEQLASGHHSIAHALKSXXXXXXXXXXILQTASFKTPSGSPEILDEPKPSQRSVPQQVPRRIVVTHKAIAYDVLRDATHVYQLALWDPSTSQGLKYFTEERKLSAATLRAFACGFAPTSPQADFLLRKLREMGYP-PEHLAIAG--VARSPRDGLIHDLFRDRVIAPIRDIQGKPISLAGRALPYAPKSAAKYINGPETYLFKKKTVLFGADIAKSAPSAKAKFGYVIVVEGYMDVMTMFERTQGRIACVATMGTGVTLEQLHAAYKLLDDCVDGKVILNFDNDEAGIKSLNRICETVVLEARCAHAIYIALPPSPVKDADEFMTEAGTPNEYMTYLLDAAKPWYEWYGDRIVK-REIERVLDPNTDVNVEVDL--GITKADMKGIGASQASHEIDLMLSKFLRRQRDDLLASVGGQ 519
            +L  R  +A+       D  G+  L+      F  +CPFH D++PS+ +S D   ++CF CGA G+ I    +L++ + G   +  A K                 ++ P    E L+ P+  Q  + QQ+ RR  + H+ +A      A   +Q  L  P  +  L Y  E R LS A+L AF  G+AP   + D LL  L+ +    PE L  AG  VAR    G  +D FR RV+ PIRD QG+ I   GR+L        KY+N PET +F+K   LFG D A  A     +    +VVEGY DV+ +     G   CVA +GT ++  Q+    +L   C   ++ILNFD D AGI++  R    V  +A         L     KD DEF+   G P EY   LLD A  W +W  ++++  R++ R  +    V   V+L   + +A  +     Q +  +    +  +R   +DL   V GQ
Sbjct:    3 RLHPRTIEAVKERADIVDVVGEHVLLKKKGREFVGLCPFHEDRSPSMTVSPDKQFYYCFSCGAGGNAIKFLMELQRTSFGEVVLELARK-----------------YQLPV---ETLEGPQ--QERLRQQLSRRDRL-HRVLAL-----AAGWFQAQLRLPEGAGALAYLVESRGLSPASLEAFQLGYAPD--RWDGLLVHLQAVEQQAPELLLDAGLVVARKGGGGF-YDRFRHRVMVPIRDRQGRVIGFGGRSLD---GGEPKYLNSPETEVFEKGRHLFGLDRAAEAIRRDDR---AVVVEGYFDVIAL--HAAGIANCVAALGTALSSHQITQLGRL---CDSKRLILNFDADGAGIRAAQRAIGEVEQQALQGLLELRVLQLPAGKDPDEFLRSHG-PGEYRA-LLDGAPLWLDWQIEQVLAPRDLSRADEFQQAVAALVELLGKLPQATHRTRYIQQVAERLSQGRAHLVRSLEEDLRQQVKGQ 448          
BLAST of Gvermi12772.t1 vs. uniprot
Match: A0A3M1RB75_9BACT (DNA primase n=1 Tax=Nitrospinae bacterium TaxID=2026769 RepID=A0A3M1RB75_9BACT)

HSP 1 Score: 164 bits (416), Expect = 5.370e-39
Identity = 132/416 (31.73%), Postives = 197/416 (47.36%), Query Frame = 0
Query:   38 PKQLWGRVRKAIPLSQAFADRYGDSALISTGPERFKLVCPFHNDKNPSLHISDDLGTFHCFGCGASGSIIDLEQLASGHHSIAHALKSXXXXXXXXXXILQTASFKTPSGSPEILDEPKPSQRSVPQQVPRRIVVTHKAIAYDVLRDATHVYQLALWDPSTSQGLKYFTEERKLSAATLRAFACGFAPTSPQADFLLRK-LREMGYPPEHLAIAGVARS-PRDGLIHDLFRDRVIAPIRDIQGKPISLAGRALPYAPKSAAKYINGPETYLFKKKTVLFGADIAKSAPSAKAKFGYVIVVEGYMDVMTMFERTQGRIACVATMGTGVTLEQLHAAYKLLDDCVDGKVILNFDNDEAGIKSLNRICETVVLEARCAHAIYIALPPSPVKDADEFMTEAGTPNEYMTYLLDAAKPWYE 451
            P+Q+   VR  + +     D   D   +    E FK +CPFH ++ PS  +S     FHCFGCGA G++     +   H S   A+            + Q A    P          +PS R  P Q  +R     K I Y +    T  YQ  L  P+  +  + +  +R ++A  +  F  G+AP  P+ D L++  + E G  P  L   G+ +  P+    +DLFRDR+I PI D+QG+PI+  GRAL        KY+N PET L+KK  +L+G   A+ A     + GYV+VVEGY D++T+++   G    VAT+GT +T  Q H       +     ++L FD D+AG  +  R   T+++EA   +   + LP     D D  +   G   E   +LLD A P+ E
Sbjct:    5 PQQVIDEVRSRVDI----VDLIADYVSLQPSGENFKGLCPFHQEQTPSFVVSPRKQLFHCFGCGAGGNVFHF-LMRYEHLSFPEAVS----------LLAQRAGIPLP----------RPSHR--PSQEEQR-----KEIFYQLNTSVTEYYQHLLQHPTLGRRGQEYLRQRGITAQVISTFRLGYAP--PRWDTLVKYFVEEQGRSPSLLQTGGLIKPRPQGKGFYDLFRDRIIFPILDLQGRPIAFGGRALE--SDQLPKYLNSPETPLYKKGEMLYGLYHARQAIR---RLGYVLVVEGYFDLLTLWQA--GIENVVATLGTSMTRRQAHLLRNYTRE-----IVLVFDGDQAGKAAAFR-GNTLLMEAGI-NVRLLVLPAGT--DPDTLIRTQG--KEAFLHLLDQALPFIE 368          
BLAST of Gvermi12772.t1 vs. uniprot
Match: A0A367S1P0_9NOSO (DNA primase n=2 Tax=Nostocaceae TaxID=1162 RepID=A0A367S1P0_9NOSO)

HSP 1 Score: 165 bits (418), Expect = 5.820e-39
Identity = 138/466 (29.61%), Postives = 219/466 (47.00%), Query Frame = 0
Query:   57 DRYGDSALISTGPERFKLVCPFHNDKNPSLHISDDLGTFHCFGCGASGSIIDLEQLASGHHSIAHALKSXXXXXXXXXXILQTASFKTPSGSPEILDEPKPSQRSVPQQVPRRIVVTHKAIAYDVLRDATHVYQLALWDPSTSQGLKYFTEERKLSAATLRAFACGFAPTSPQADFLLRKLRE-MGYPPEHLAIAGVARSPRDGL-IHDLFRDRVIAPIRDIQGKPISLAGRALPYAPKSAAKYINGPETYLFKKKTVLFGADIAKSAPSAKAKFGYVIVVEGYMDVMTMFERTQGRIACVATMGTGVTLEQLHAAYKLLDDCVDGKVILNFDNDEAGIKSLNR-ICETVVLEARCAHAIYIALPPSPVKDADEFMTEAGTPNEYMTYLLDAAKPWYEWYGDRIVK-REIERVLDPN--TDVNVEVDLGITKADMKGIGASQASHEIDLMLSKFLRRQRDDLLASV 516
            D   +  L+    + F  +CPFH++K+PS  +S     ++CFGC A G+ I    +  G  S A  +             L+                  P QR   Q++ R++ +  +   Y+VL      YQ AL      +   Y    R+L   T++ F  G+APT  +   L R L E   YP + +  AG+ +S ++G   +D+FRDR++ PIRD+QG+ I   GR L        KY+N PET LF K   LF  D+AK+  S   +    IVVEGY D + +     G    VA++GT ++LEQ+    +  +     ++ILNFD D+AG  +  R I E   L  +    + I   P+  KDADE++    TP +Y   L +A   W +W   +I+K R++ +  D    T   V++   IT +D +    S  +  + L  S+ +  + ++LL  +
Sbjct:   22 DVVSEHVLLRKRGKDFVGLCPFHDEKSPSFTVSQTKQMYYCFGCQAGGNAIKF-LMDLGKRSFAEVVLDLARRYQVSVQTLE------------------PEQR---QELQRQLSLREQL--YEVLASTAQFYQHALRQSQGQKASHYLRSNRRLKEETIQQFGLGYAPTGWET--LYRYLVEDRHYPVQLVEKAGLIKSRKEGGGYYDVFRDRLMIPIRDVQGRVIGFGGRTLT---DEQPKYLNSPETELFSKGKTLFALDLAKTGIS---QLDRAIVVEGYFDAIAL--HAAGITNAVASLGTALSLEQVRLVLRYTES---KQLILNFDADKAGTNAAERAIGEIADLAYKGEVQLKILNLPNG-KDADEYL-HTHTPEDYGELLANAPL-WLDWQIQQIIKDRDLRQATDFQQVTQQLVKLLKNITNSDTRNYYVSYCAEILSLGDSRLIPLRVENLLTQI 447          
The following BLAST results are available for this feature:
BLAST of Gvermi12772.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IEW5_9FLOR0.000e+065.86DNA primase n=1 Tax=Gracilariopsis chorda TaxID=44... [more]
R7QPD4_CHOCR4.600e-20039.20Toprim domain-containing protein n=1 Tax=Chondrus ... [more]
A0A2T2RXG0_9CYAN1.160e-4032.83DNA primase n=1 Tax=Cyanobacteria bacterium QS_8_6... [more]
A0A0M1JKV3_9CYAN1.660e-4031.40DNA primase n=1 Tax=Planktothricoides sp. SR001 Ta... [more]
N1UWT2_9MICC4.590e-4032.34DNA primase (Fragment) n=1 Tax=Arthrobacter crysta... [more]
A0A4P7ZU95_9SYNE2.010e-3934.16DNA primase n=4 Tax=Synechococcaceae TaxID=1890426... [more]
UPI000CD0FDA23.530e-3928.70DNA primase n=1 Tax=Tabrizicola aquatica TaxID=909... [more]
A0A4P5VHN1_9CYAN4.400e-3931.43DNA primase n=1 Tax=Cyanobium sp. TaxID=2164130 Re... [more]
A0A3M1RB75_9BACT5.370e-3931.73DNA primase n=1 Tax=Nitrospinae bacterium TaxID=20... [more]
A0A367S1P0_9NOSO5.820e-3929.61DNA primase n=2 Tax=Nostocaceae TaxID=1162 RepID=A... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002694Zinc finger, CHC2-typeSMARTSM00400primzinc3coord: 72..127
e-value: 2.1E-11
score: 53.9
IPR002694Zinc finger, CHC2-typePFAMPF01807zf-CHC2coord: 71..132
e-value: 1.5E-13
score: 50.4
IPR006171TOPRIM domainSMARTSM00493toprim5coord: 330..408
e-value: 0.0039
score: 25.3
IPR006171TOPRIM domainPROSITEPS50880TOPRIMcoord: 330..419
score: 12.855785
IPR036977DNA Primase, CHC2-type zinc fingerGENE3D3.90.580.10coord: 42..135
e-value: 2.5E-17
score: 64.5
NoneNo IPR availableGENE3D3.40.1360.10coord: 309..443
e-value: 3.3E-20
score: 74.4
NoneNo IPR availablePFAMPF13155Toprim_2coord: 333..428
e-value: 2.3E-11
score: 43.9
NoneNo IPR availablePANTHERPTHR30313DNA PRIMASEcoord: 68..460
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..915
NoneNo IPR availableSUPERFAMILY57783Zinc beta-ribboncoord: 39..131
NoneNo IPR availableSUPERFAMILY56731DNA primase corecoord: 179..459
IPR013264DNA primase, catalytic core, N-terminalPFAMPF08275Toprim_Ncoord: 189..319
e-value: 3.8E-26
score: 91.7
IPR037068DNA primase, catalytic core, N-terminal domain superfamilyGENE3D3.90.980.10coord: 172..308
e-value: 5.3E-27
score: 96.4
IPR034151Bacterial DnaG primase, TOPRIM domainCDDcd03364TOPRIM_DnaG_primasescoord: 332..401
e-value: 7.84197E-15
score: 68.3095

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1471270..1474017 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12772.t1Gvermi12772.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1471270..1474017 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12772.t1 ID=Gvermi12772.t1|Name=Gvermi12772.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=916bp
MISNRHGSTRLPLFIPLALPRSSPPARRKFLVCQRTSPKQLWGRVRKAIP
LSQAFADRYGDSALISTGPERFKLVCPFHNDKNPSLHISDDLGTFHCFGC
GASGSIIDLEQLASGHHSIAHALKSLANKYHSIAKILQTASFKTPSGSPE
ILDEPKPSQRSVPQQVPRRIVVTHKAIAYDVLRDATHVYQLALWDPSTSQ
GLKYFTEERKLSAATLRAFACGFAPTSPQADFLLRKLREMGYPPEHLAIA
GVARSPRDGLIHDLFRDRVIAPIRDIQGKPISLAGRALPYAPKSAAKYIN
GPETYLFKKKTVLFGADIAKSAPSAKAKFGYVIVVEGYMDVMTMFERTQG
RIACVATMGTGVTLEQLHAAYKLLDDCVDGKVILNFDNDEAGIKSLNRIC
ETVVLEARCAHAIYIALPPSPVKDADEFMTEAGTPNEYMTYLLDAAKPWY
EWYGDRIVKREIERVLDPNTDVNVEVDLGITKADMKGIGASQASHEIDLM
LSKFLRRQRDDLLASVGGQPQAPEFSVDPPKRAPCSKEVLDELATVVNSA
ARTLPGLNVSALVHSWTDLLSLGEPTKLLPMFAYVIKKYRELSKPWRHLS
IPVQVQWLPPPPWIEKQLEKMKKKPRSLGTITDPNSQPQKLEFTPKELKR
IRERIRFQEEYILPELRARRCDRSKMTKAAPRRAAEELILRALIFAEEID
RIDALEILIDAIIRCAEKKLPFWTSKAREGFFEYLSQLEGAASPEEMAAY
LEESDWWCKEIEDLFIPIEEEVDPEWAGLRRLEINHPIDMVRTCALSIER
MAGMVGSRQAIEKSGDVMQRVAEAASLASNAGGSQQDIMKKTQELLAKEM
PSREELDRGNFLNPVEAAERDKEMEKVNAKLLDAARKAKIFKDLKSGQIS
PPAWADSLKEDRSGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002694Znf_CHC2
IPR006171TOPRIM_domain
IPR036977DNA_primase_Znf_CHC2
IPR013264DNA_primase_core_N
IPR037068DNA_primase_core_N_sf
IPR034151TOPRIM_DnaG_bac