Gvermi12766.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12766.t1
Unique NameGvermi12766.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length207
Homology
BLAST of Gvermi12766.t1 vs. uniprot
Match: A0A2V3IJX8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJX8_9FLOR)

HSP 1 Score: 254 bits (649), Expect = 3.740e-83
Identity = 129/199 (64.82%), Postives = 161/199 (80.90%), Query Frame = 0
Query:    3 SASTVREMLVSNDSLQRIRGINRASELSSTSEIVSALVPIASEDANQQVRYVAISRLSSLDPSSLSEEDKQTLLTAARYILVNDGESSCQAGAADMIAGLRLLAGFDDLISTFNTTSDWMLKFSIAAGMGEMGDPKAFDFLVSVLDTESEESFLLVSAAIGSLXXXXXXXALPIIERYLNSEEKSIKERAVIAHEMLMK 201
            +A +V++ML S+D L+RIRGINR +EL STSE V  L+ I++ D NQQVRY A+SRLS++D +SLSEEDK+ LLTAAR++LVND ESSCQ+ AAD+IA LRL  GFDDL+ TFN+TSDWMLKFSIAAG+GEMGD KAFDFLVS+LD ES    LL++AAIGS+        LPI+ERYL +E+KS++ERA IA  ML+K
Sbjct:    2 NADSVKDMLASDDLLERIRGINRINELPSTSERVETLIKISTGDVNQQVRYAAVSRLSNMDRASLSEEDKEKLLTAARFVLVNDSESSCQSAAADLIAALRLYEGFDDLVDTFNSTSDWMLKFSIAAGLGEMGDAKAFDFLVSILDGESSNESLLITAAIGSIGELGDERGLPIVERYLENEDKSVRERAKIARAMLLK 200          
BLAST of Gvermi12766.t1 vs. uniprot
Match: UPI001E1D6BCB (uncharacterized protein LOC123544650 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D6BCB)

HSP 1 Score: 176 bits (447), Expect = 1.410e-52
Identity = 96/197 (48.73%), Postives = 138/197 (70.05%), Query Frame = 0
Query:    4 ASTVREMLVSNDSLQRIRGINRASELSSTSEIVSALVPIASEDANQQVRYVAISRLSSLDPSSLSEEDKQTLLTAARYILVNDGESSCQAGAADMIAGLRLLAGFDDLISTFNTTSDWMLKFSIAAGMGEMGDPKAFDFLVSVLD-TESEESFLLVSAAIGSLXXXXXXXALPIIERYLNSEEKSIKERAVIAHEML 199
            A  V + L S D L R+R IN   +  + +++++ALVP+AS D N Q+RY AIS+L+ LD + L++E+K TLL  +  ++ ND +SSCQ+GAAD+IAGL L  GF+ L+STFN T+DWMLK +IAAGMGE+GDP+A DFL   ++  E E + LL++A IG+L        LP+IER+L   + SI++RA IA E++
Sbjct:    5 AEPVEDPLASPDFLTRVRAINDHRQR-APAQVIAALVPLASADKNPQIRYSAISQLAGLDRNELTDEEKATLLQTSIEMIKNDTDSSCQSGAADVIAGLGLTDGFETLVSTFNETTDWMLKLTIAAGMGEIGDPRASDFLKGEVEGAEGEGNELLLTAIIGALGDIRDPDGLPVIERFLEHPDVSIRQRAAIAVELI 200          
BLAST of Gvermi12766.t1 vs. uniprot
Match: A0A5J4ZAR7_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4ZAR7_PORPP)

HSP 1 Score: 117 bits (292), Expect = 8.830e-29
Identity = 74/197 (37.56%), Postives = 117/197 (59.39%), Query Frame = 0
Query:    3 SASTVREMLVSNDSLQRIRGINRASELSSTSEIVSALVPIASEDANQQVRYVAISRLSSLDPSSLSEEDKQTLLTAARYILVNDGESSCQAGAADMIAGLRLLAGFDDLISTFNTTSDWMLKFSIAAGMGEMGDPKAFDFLVSVLDTESEESFLLVSAAIGSLXXXXXXXALPIIERYLNSEEKSIKERAVIAHEML 199
            S  +V EM+ S +   R R +N+A  L    E +  L  + +ED N Q+RY A+++L++   +     D +      + I++ D E + QA AAD++ GL L   F+ L   ++ T DWMLKFSI +G+GEMGDP+ ++ L+ VL+T S++  LL   A    XXXXX  ALP++E+Y++  + +I ERA +A + L
Sbjct:   53 SKESVMEMIRSENGGLRARAVNQARFL-DPQECLDVLF-VGAEDKNPQIRYAAVAQLATACTA-----DPERTFELVKRIVLTDKEPTVQAAAADVLTGLSLPGSFELLEEIYSQTGDWMLKFSIISGLGEMGDPRGYELLLRVLETASDDEPLLKVGAXXXXXXXXXRRALPMVEKYIDHPDSAISERAKVARDNL 242          
BLAST of Gvermi12766.t1 vs. uniprot
Match: B8HNS4_CYAP4 (PBS lyase HEAT domain protein repeat-containing protein n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) TaxID=395961 RepID=B8HNS4_CYAP4)

HSP 1 Score: 114 bits (286), Expect = 3.580e-28
Identity = 67/190 (35.26%), Postives = 109/190 (57.37%), Query Frame = 0
Query:    2 SSASTVREMLVSNDSLQRIRGINRASELSSTSEIVSALVPIASEDANQQVRYVAISRLSSLDPSSLSEEDKQTLLTAARYILVNDGESSCQAGAADMIAGLRLLAGFDDLISTFNTTSDWMLKFSIAAGMGEMGDPKAFDFLVSVLDTESEESFLLVSAAIGSLXXXXXXXALPIIERYLNSEEKSIKER 191
            ++A  VR  L SND  +R+R +N+   L     I   LV IA +D+N +VRY A+S ++ L      +++ Q  L   R  L+ND E   +A AAD + GL+L   FDD++  + +TS+W+++FSI A +GE+GDP+ F+ L+  L ++     LL  AAIG+L       A+P +  Y++  +  ++ R
Sbjct:    3 TAAEEVRTALSSNDFGERLRAVNQFRSLDRG--IAFDLVQIAVKDSNARVRYAAVSHMAHL-----GDQNPQLSLEILRDCLLNDDEMDVRAAAADALGGLKLTDAFDDIVQLYESTSEWLVQFSILAALGELGDPRGFEVLIRALSSDQN---LLRLAAIGALGDLGNADAVPYLAPYVDDPDWHVRYR 182          
BLAST of Gvermi12766.t1 vs. uniprot
Match: A0A6G3Z3U8_9CYAN (HEAT repeat domain-containing protein n=1 Tax=Leptolyngbya sp. SIO1D8 TaxID=2607807 RepID=A0A6G3Z3U8_9CYAN)

HSP 1 Score: 109 bits (272), Expect = 4.300e-26
Identity = 59/146 (40.41%), Postives = 89/146 (60.96%), Query Frame = 0
Query:    5 STVREMLVSNDSLQRIRGINRASELSSTSEIVSALVPIASEDANQQVRYVAISRLSSLDPSSLSEEDKQTLLTAARYILVNDGESSCQAGAADMIAGLRLLAGFDDLISTFNTTSDWMLKFSIAAGMGEMGDPKAFDFLVSVLDTE 150
            ++V+++L S+D   R+R +N+  EL     I   LV  A  D++ +VRY AIS++ +L      ++D Q  L   R  L  D E   Q+ AAD + GL++L  FDDL S +  T +W++KFSI A +GE GDP+AF+ LVS LD++
Sbjct:    6 ASVKQLLASSDVGDRLRAVNQMRELDPA--IAFELVQPACTDSSSRVRYAAISQMDTL-----GQQDLQKALDILRQALKTDPEPDVQSAAADALGGLKILEAFDDLRSVYEDTGEWLVKFSIVAALGEFGDPRAFELLVSALDSD 144          
BLAST of Gvermi12766.t1 vs. uniprot
Match: A0A6I5P832_9CYAN (HEAT repeat domain-containing protein n=1 Tax=Leptolyngbya sp. SIOISBB TaxID=2607771 RepID=A0A6I5P832_9CYAN)

HSP 1 Score: 109 bits (272), Expect = 4.300e-26
Identity = 57/148 (38.51%), Postives = 93/148 (62.84%), Query Frame = 0
Query:    3 SASTVREMLVSNDSLQRIRGINRASELSSTSEIVSALVPIASEDANQQVRYVAISRLSSLDPSSLSEEDKQTLLTAARYILVNDGESSCQAGAADMIAGLRLLAGFDDLISTFNTTSDWMLKFSIAAGMGEMGDPKAFDFLVSVLDTE 150
            ++ +V++++ S++  +R+RG+N+A EL   S     L+  A +D N +VRY A+S+L +L       +D+   +   R IL ND E   Q+ AAD + GL++   F DL S ++TT +W+LKFSI A +GE+GDP+ FD LV  L+++
Sbjct:    4 TSESVQQLIESSNLGERLRGVNQARELDPASSY--PLIVQACKDDNSRVRYAAVSQLDTL-----GNQDRPQTVGLLRDILFNDPEPDVQSAAADALGGLKVTEAFTDLQSAYDTTDEWLLKFSIVAALGELGDPRGFDLLVKALESD 144          
BLAST of Gvermi12766.t1 vs. uniprot
Match: UPI001686FA59 (HEAT repeat domain-containing protein n=1 Tax=unclassified Leptolyngbya TaxID=2650499 RepID=UPI001686FA59)

HSP 1 Score: 108 bits (271), Expect = 6.050e-26
Identity = 63/158 (39.87%), Postives = 100/158 (63.29%), Query Frame = 0
Query:    6 TVREMLVSNDSLQRIRGINRASELSSTSEIVSALVPIASEDANQQVRYVAISRLSSLDPSSLSEEDKQTLLTAARYILVNDGESSCQAGAADMIAGLRLLAGFDDLISTFNTTSDWMLKFSIAAGMGEMGDPKAFDFLVSVLDTESEESFLLVSAAIG 163
            +V+ +L + D  QR+RG+N+  EL   +     + P+ + D+N +VRY A+S+LSSL       +D+   L   R  L ND E+  +A AAD +A L+L   FDD+ + FN+T +W+L+FSIAA +GE+GDP+ F+ L + + +E+E   L+ +AAIG
Sbjct:    7 SVKALLEAEDFGQRLRGVNQLRELEPATAF-DLIQPVIT-DSNVRVRYAAVSQLSSL-----GGQDRDVSLQVLRDRLNNDPETDVKAAAADSLAALKLTEAFDDMQTVFNSTQEWLLQFSIAAALGELGDPRGFELLQNAIQSENE---LVRTAAIG 154          
BLAST of Gvermi12766.t1 vs. uniprot
Match: A0A6H2NH62_9CYAN (HEAT repeat domain-containing protein n=2 Tax=Pseudanabaenales TaxID=2881377 RepID=A0A6H2NH62_9CYAN)

HSP 1 Score: 108 bits (271), Expect = 6.200e-26
Identity = 69/190 (36.32%), Postives = 110/190 (57.89%), Query Frame = 0
Query:    6 TVREMLVSNDSLQRIRGINRASELSSTSEIVSALVPIASEDANQQVRYVAISRLSSLDPSSLSEEDKQTLLTAARYILVNDGESSCQAGAADMIAGLRLLAGFDDLISTFNTTSDWMLKFSIAAGMGEMGDPKAFDFLVSVLDTESEESFLLVSAAIGSLXXXXXXXALPIIERYLNSEEKSIKERAVIA 195
            +VRE+L S D   R+R +N+  EL   +     LV +A+ D N +VRY A+S+L+SL      ++D  T     R  L ND E   QA AAD I GL+L + + +L+S +++T +W++KFSI A +GE+G+P+AF  L   + +++E   L+ +AA    XXX    ALP++  +    +  ++ R V A
Sbjct:    7 SVRELLHSEDYGDRLRAVNQMRELDPAAAF--ELVQLAANDGNARVRYAAVSQLASL-----GQQDLVTAEALLRRALTNDPEPDVQAAAADTIGGLQLRSIYGELMSLYHSTDEWLVKFSIVAALGELGEPEAFTLLQEAVTSDNE---LIATAAXXXXXXXQDNRALPVLLPFTTHPDWQVRHRLVQA 186          
BLAST of Gvermi12766.t1 vs. uniprot
Match: A0A0C1Y1T1_9CYAN (Phycocyanin alpha phycocyanobilin lyase n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A0C1Y1T1_9CYAN)

HSP 1 Score: 108 bits (270), Expect = 8.510e-26
Identity = 54/145 (37.24%), Postives = 92/145 (63.45%), Query Frame = 0
Query:    6 TVREMLVSNDSLQRIRGINRASELSSTSEIVSALVPIASEDANQQVRYVAISRLSSLDPSSLSEEDKQTLLTAARYILVNDGESSCQAGAADMIAGLRLLAGFDDLISTFNTTSDWMLKFSIAAGMGEMGDPKAFDFLVSVLDTE 150
            ++++++ S+D   R+RG+N+A EL         L+  AS D N +VRY A+S+L +L      ++++Q      R++L+ND E+  Q+ AAD + GL+L   F++L S ++ T +W+LKFSI A +GE+GDP++FD L   L ++
Sbjct:    7 SIKQLIESSDLGDRLRGVNQARELDPADGY--RLIMQASHDENARVRYAAVSQLDTL-----GDQNRQETAKLLRHLLLNDPETDVQSAAADALGGLKLTEAFEELQSVYHATDEWLLKFSIVAALGELGDPRSFDLLAEALASD 144          
BLAST of Gvermi12766.t1 vs. uniprot
Match: A0A5Q4E4C2_9CYAN (HEAT repeat domain-containing protein n=1 Tax=Leptolyngbya sp. DLM2.Bin27 TaxID=2480213 RepID=A0A5Q4E4C2_9CYAN)

HSP 1 Score: 107 bits (268), Expect = 1.680e-25
Identity = 58/147 (39.46%), Postives = 93/147 (63.27%), Query Frame = 0
Query:    6 TVREMLVSNDSLQRIRGINRASELSSTSEIVSALVPIASEDANQQVRYVAISRLSSLDPSSLSEEDKQTLLTAARYILVNDGESSCQAGAADMIAGLRLLAGFDDLISTFNTTSDWMLKFSIAAGMGEMGDPKAFDFLVSVLDTESE 152
            +VRE+L S+D   R+R +N+  EL     I   LV +A+ D N +VRY AIS+++SL      ++D  T+    R  L +D E+  QA AAD I GL+L + + +L + +++T +W++KFSI A +GE+G+P+AFD L   L +++E
Sbjct:    7 SVRELLHSDDYGDRLRAVNQLRELDPA--IAFDLVQLAANDGNARVRYAAISQIASL-----GQQDVATVEPLLRRALTDDPEADVQAAAADTIGGLKLTSAYPELATLYHSTEEWLVKFSIVAALGELGEPQAFDLLQEALGSDNE 146          
The following BLAST results are available for this feature:
BLAST of Gvermi12766.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IJX8_9FLOR3.740e-8364.82Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
UPI001E1D6BCB1.410e-5248.73uncharacterized protein LOC123544650 n=1 Tax=Merce... [more]
A0A5J4ZAR7_PORPP8.830e-2937.56Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
B8HNS4_CYAP43.580e-2835.26PBS lyase HEAT domain protein repeat-containing pr... [more]
A0A6G3Z3U8_9CYAN4.300e-2640.41HEAT repeat domain-containing protein n=1 Tax=Lept... [more]
A0A6I5P832_9CYAN4.300e-2638.51HEAT repeat domain-containing protein n=1 Tax=Lept... [more]
UPI001686FA596.050e-2639.87HEAT repeat domain-containing protein n=1 Tax=uncl... [more]
A0A6H2NH62_9CYAN6.200e-2636.32HEAT repeat domain-containing protein n=2 Tax=Pseu... [more]
A0A0C1Y1T1_9CYAN8.510e-2637.24Phycocyanin alpha phycocyanobilin lyase n=3 Tax=Cy... [more]
A0A5Q4E4C2_9CYAN1.680e-2539.46HEAT repeat domain-containing protein n=1 Tax=Lept... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004155PBS lyase HEAT-like repeatSMARTSM00567EZ_HEATcoord: 155..184
e-value: 0.37
score: 19.9
coord: 121..150
e-value: 3.5
score: 16.6
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 2..203
e-value: 1.3E-16
score: 62.8
NoneNo IPR availablePFAMPF13646HEAT_2coord: 111..195
e-value: 4.1E-9
score: 36.7
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 33..198

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1451585..1452205 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12766.t1Gvermi12766.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1451585..1452205 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12766.t1 ID=Gvermi12766.t1|Name=Gvermi12766.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=207bp
MSSASTVREMLVSNDSLQRIRGINRASELSSTSEIVSALVPIASEDANQQ
VRYVAISRLSSLDPSSLSEEDKQTLLTAARYILVNDGESSCQAGAADMIA
GLRLLAGFDDLISTFNTTSDWMLKFSIAAGMGEMGDPKAFDFLVSVLDTE
SEESFLLVSAAIGSLGELGDERALPIIERYLNSEEKSIKERAVIAHEMLM
KSRNSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004155PBS_lyase_HEAT
IPR011989ARM-like
IPR016024ARM-type_fold