Gvermi12764.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12764.t1
Unique NameGvermi12764.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length506
Homology
BLAST of Gvermi12764.t1 vs. uniprot
Match: A0A2V3ILG6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILG6_9FLOR)

HSP 1 Score: 474 bits (1219), Expect = 3.550e-160
Identity = 262/470 (55.74%), Postives = 328/470 (69.79%), Query Frame = 0
Query:    1 MSAFHTRARRAWRFLVPVPACCLLQAIFGLLYASGVFVALIDRSDYTLSVGVAGLFTSVGITMGGIAMNKLVPRAS--AQLAPVYVALVGAVGMAAQLLCAVALAVHNRPLLFCAAALYGMGCGCIYVASVDVLQAWVPEARGTITGVGMLCGVTGSLLGIEAFRALAASFDSPLHAIALVAFLSAALTFAAAPMLQRPPPGWHPTMAVPRADLAAHPAAPDESVPLI---------SSTTPCPSYSTLSVSDILTDPSFYMLVIALAGTVGPGFGVVLAFQKMAANLFAVDIHHANSLFFWVTFSGIAGRLLSGVGVDALDDTRERHAGMLGAKRTNKILLAAQFVAVLLVPSAVSAGSTAAFMLAAAVIYITFSGGPVVIACLVGGVFDQNNASLAFSLIAVSIGLGDVFFSWVVARCSELSSLSGASD---PRSHVNDYNLFIVCSALWSVAGFLATHYISRCKKLR 456
            M +  +   R +R++VPVPAC LLQA+FGLLYA GVFVAL+    YTL++G+A  F SVGIT+ G++M+KL   +   AQ APVY AL G+VG++ Q + A+ALA+ N  LL+ A+ LYG GCGCIYVASVDVLQAWVPE+RG ITGVGMLCG  GSL GI  +RAL A+  +P+ A+A V  +SAAL+FAAAPML++PP GWHP       DL A     +E+ PL+          S    P  + +SV DIL D SFYMLV+A A TVGPGFG+VLA+Q M  ++F   I  AN+LFFW+TFSG+AGRLL+G+GVDAL+        + G KRTN +LL  Q  A   +P  + A    AF  A A+IYITFSGGPVV ACLVG VFDQ NASLAFSL+A+SIG GD+FFSWVVA CSE ++         PR H +DYNLF+ C+ +WS+AG +ATH+ISRC KLR
Sbjct:    1 MISLSSLLLRDYRYVVPVPACFLLQALFGLLYAQGVFVALVHTPQYTLAIGLASFFVSVGITLSGVSMSKLASSSPSHAQSAPVYAALAGSVGLSGQTVLALALALDNVHLLYAASVLYGTGCGCIYVASVDVLQAWVPESRGFITGVGMLCGAAGSLFGIYIYRALVAALGAPIPAMAFVGAVSAALSFAAAPMLKKPPAGWHPAR-----DLRA--GGDEENAPLLITHAAQRALHSPPSAPHPAVISVRDILRDRSFYMLVVAFAATVGPGFGLVLAYQTMLIDMFGAAISEANNLFFWITFSGLAGRLLAGIGVDALESDVGSAPRLTGGKRTNMLLLLVQIAATASLPFFIRANMLYAFTAACALIYITFSGGPVVAACLVGAVFDQVNASLAFSLVAISIGAGDMFFSWVVAMCSESTAYPRVLHDRLPRFHASDYNLFLWCTVIWSLAGLVATHFISRCDKLR 463          
BLAST of Gvermi12764.t1 vs. uniprot
Match: R7QEU2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEU2_CHOCR)

HSP 1 Score: 374 bits (960), Expect = 2.700e-121
Identity = 225/478 (47.07%), Postives = 299/478 (62.55%), Query Frame = 0
Query:   13 RFLVPVPACCLLQAIFGLLYASGVFVALIDRSDYTLSVGVAGLFTSVGITMGGIAMNKLVPRASAQLAPVYVALVGAVGMAAQLLCAVALAVHNRPLLFCAAALYGMGCGCIYVASVDVLQAWVPEARGTITGVGMLCGVTGSLLGIEAFRALAASFDSPLHAIALVAFLSAALTFAAAPMLQRPPPGWHPTMAV-----PRAD-----LAAHPAAPDESVPLISSTT-----PCPSYSTLSVSDILTDPSFYMLVIALAGTVGPGFGVVLAFQKMAANLFAVDIHHANSLFFWVTFSGIAGRLLSGVGVDALDDTRERHAGML-GAKRTNKILLAAQFVAVLLVPSAVSAGSTAAFMLAAAVIYITFSGGPVVIACLVGGVFDQNNASLAFSLIAVSIGLGDVFFSWVVARCSELS----SLSGASDP----RSHVNDYNLFIVCSALWSVAGFLATHYISRCKKLRDNGENEQRRG 466
            R+ V VPACCLLQ  FGL YASGVF+A ID   +T S+GVAG   +VGIT  G+ MN+L+P + + LAPVY+A++GA+ + AQ+L   A+A  N  LL  +A   G+G G IY+ASVDVLQ+WVPEA G I G+GMLCG  GSL+GI     L      PL A+ +   ++  +  A+A +++RPPP W PT +V     P  D     ++ H  +  E   L+  +T      CP    L+V DILTD SFY+L++A A TVGPGFG VLAFQKMA  LF V +  AN L+F VTF+G+AGRL++G  VD L     R    L GA++TN ILL  Q +A+L +P ++  G   AF +A+A +Y+TFSGG VV AC+V G++   NASL FSL+AVSIG GDVFFSW+VA C +LS    S + A  P     +H  DYN+F++   LWS+ G  A+  I     L  +G+ E   G
Sbjct:   35 RWYVQVPACCLLQITFGLFYASGVFIAEIDSPLFTFSIGVAGFSIAVGITFFGVLMNRLIPTSHSVLAPVYIAVIGALALFAQVLMPHAVASDNSVLLLASAVAVGLGSGAIYLASVDVLQSWVPEAPGVIMGIGMLCGGVGSLIGIRVDIVLTQLLGGPLPALGVSGAIAGVVALASAVLVRRPPPDWTPTSSVTASGAPVMDEECGTVSLH--SDSELAALLPLSTLELMRNCPQ---LTVKDILTDRSFYLLLVAFAATVGPGFGFVLAFQKMAYTLFGVSMAEANRLYFSVTFAGVAGRLVTGWTVDKLQSLDSRDEDSLYGARKTNMILLVGQTIALLAIPVSIHNGHVGAFTVASAAVYVTFSGGVVVAACMVRGIYMPRNASLGFSLVAVSIGFGDVFFSWIVAWCGDLSDVEKSYASAISPGVTSEAHQGDYNIFLLFGLLWSLCGLAASLCIEVSPTLMAHGDGETASG 507          
The following BLAST results are available for this feature:
BLAST of Gvermi12764.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3ILG6_9FLOR3.550e-16055.74Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QEU2_CHOCR2.700e-12147.07Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011701Major facilitator superfamilyPFAMPF07690MFS_1coord: 32..400
e-value: 4.5E-10
score: 39.0
IPR036259MFS transporter superfamilyGENE3D1.20.1250.20MFS general substrate transporter like domainscoord: 6..200
e-value: 1.2E-8
score: 36.6
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 7..458
NoneNo IPR availablePANTHERPTHR11360:SF3OXALATE/FORMATE ANTIPORTERcoord: 18..435
NoneNo IPR availablePANTHERPTHR11360MONOCARBOXYLATE TRANSPORTERcoord: 18..435
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 139..159
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 386..407
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 171..191
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 380..385
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 329..347
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 348..352
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 249..268
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 69..79
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 192..248
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 41..45
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 46..68
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 160..170
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 128..138
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 353..379
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 408..426
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 80..102
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 288..309
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 310..328
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 427..449
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..40
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 108..127
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 103..107
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 450..505
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 269..287
NoneNo IPR availableTMHMMTMhelixcoord: 330..352
NoneNo IPR availableTMHMMTMhelixcoord: 386..408
NoneNo IPR availableTMHMMTMhelixcoord: 357..379
NoneNo IPR availableTMHMMTMhelixcoord: 428..450
NoneNo IPR availableTMHMMTMhelixcoord: 109..128
NoneNo IPR availableTMHMMTMhelixcoord: 143..165
NoneNo IPR availableTMHMMTMhelixcoord: 172..194
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
NoneNo IPR availableTMHMMTMhelixcoord: 50..67
NoneNo IPR availableTMHMMTMhelixcoord: 82..104
NoneNo IPR availableTMHMMTMhelixcoord: 248..270

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1420436..1421953 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12764.t1Gvermi12764.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1420436..1421953 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12764.t1 ID=Gvermi12764.t1|Name=Gvermi12764.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=506bp
MSAFHTRARRAWRFLVPVPACCLLQAIFGLLYASGVFVALIDRSDYTLSV
GVAGLFTSVGITMGGIAMNKLVPRASAQLAPVYVALVGAVGMAAQLLCAV
ALAVHNRPLLFCAAALYGMGCGCIYVASVDVLQAWVPEARGTITGVGMLC
GVTGSLLGIEAFRALAASFDSPLHAIALVAFLSAALTFAAAPMLQRPPPG
WHPTMAVPRADLAAHPAAPDESVPLISSTTPCPSYSTLSVSDILTDPSFY
MLVIALAGTVGPGFGVVLAFQKMAANLFAVDIHHANSLFFWVTFSGIAGR
LLSGVGVDALDDTRERHAGMLGAKRTNKILLAAQFVAVLLVPSAVSAGST
AAFMLAAAVIYITFSGGPVVIACLVGGVFDQNNASLAFSLIAVSIGLGDV
FFSWVVARCSELSSLSGASDPRSHVNDYNLFIVCSALWSVAGFLATHYIS
RCKKLRDNGENEQRRGPSISVDNVPISMDGVLAPFEKTSRQSSCETHLPS
CADLC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011701MFS
IPR036259MFS_trans_sf