Gvermi12749.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12749.t1
Unique NameGvermi12749.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length151
Homology
BLAST of Gvermi12749.t1 vs. uniprot
Match: A0A2V3IFT2_9FLOR (Ubiquitin domain-containing protein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFT2_9FLOR)

HSP 1 Score: 235 bits (600), Expect = 1.710e-77
Identity = 111/150 (74.00%), Postives = 130/150 (86.67%), Query Frame = 0
Query:    1 MGCASSKDEPRTDGAPSPPWDGHVRPPRAWKVEPAISSQHLQRLRNEFWETRVEGRPEMWQALRFAAESESDELRDETVKAAGLRPANRRCTMQSMFDELGAMYEIPVYALIDPLNLDQQPVHEQFKHAAKAVTDYVNSHDKSKRTPRAL 150
            MGCASSK   R+    SP WDGH+RP RAWK+E  IS++HL RLRNEFWETRVEGRPEMWQALRFAAES+SDELRDET+KAAG+RPANRR TMQ+MFDE GA+Y IP+YAL+DP NLD+QP +E+FK AA+AV DYV +HDKS+RTPR+L
Sbjct:    1 MGCASSKQSRRSSERESPQWDGHIRPVRAWKLERPISTEHLARLRNEFWETRVEGRPEMWQALRFAAESQSDELRDETLKAAGMRPANRRYTMQTMFDERGALYAIPMYALVDPTNLDEQPSYEEFKDAARAVADYVEAHDKSRRTPRSL 150          
BLAST of Gvermi12749.t1 vs. uniprot
Match: A0A5J4Z2P8_PORPP (Ubiquitin domain-containing protein 2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z2P8_PORPP)

HSP 1 Score: 154 bits (390), Expect = 1.920e-45
Identity = 72/117 (61.54%), Postives = 90/117 (76.92%), Query Frame = 0
Query:   20 WDGHVRPPRAWKVEPAISSQHLQRLRNEFWETRVEGRPEMWQALRFAAESESDELRDETVKAAGLRPANRRCTMQSMFDELGAMYEIPVYALIDPLNLDQQPVHEQFKHAAKAVTDY 136
            WDGHVR    W+VEPA++   L+RLRNEFWETRVEGR EMWQALR AAE+++D+LRDE VKAAG+RPA    T+   +DE GA+YE+P+Y L DP NLD +P   +FK AA+AV +Y
Sbjct:   31 WDGHVRSVAPWRVEPAVTRAQLERLRNEFWETRVEGREEMWQALRAAAEADTDDLRDEIVKAAGIRPAAANATLLVAYDERGALYEVPIYCLRDPDNLDGEPACPEFKDAARAVQEY 147          
BLAST of Gvermi12749.t1 vs. uniprot
Match: A0A7S1XEH7_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XEH7_9RHOD)

HSP 1 Score: 151 bits (382), Expect = 2.460e-44
Identity = 76/139 (54.68%), Postives = 97/139 (69.78%), Query Frame = 0
Query:    1 MGCASSKDEPRTDGAPSP---PWDGHVRPPRAWKVEPAISSQHLQRLRNEFWETRVEGRPEMWQALRFAAESESDELRDETVKAAGLRPANRRCTMQSMFDELGAMYEIPVYALIDPLNLDQQPVHEQFKHAAKAVTDY 136
            MGC  S+      G        WDG VR    WK+E A++ +HLQRLR EFWETRVEG+PEMWQALR AAE+  D LRDE ++A+GLRPA+RR T+ +M+DELGA+Y +P+Y + DP NL ++P  E+FK AA AV  Y
Sbjct:    1 MGCVGSRARDDDGGGTHAYDFQWDGRVRDVGDWKLELALTPEHLQRLRAEFWETRVEGKPEMWQALRAAAEALDDTLRDEIIRASGLRPASRRGTLLAMYDELGALYLVPIYCVRDPSNLGEKPAFEEFKDAAHAVKVY 139          
BLAST of Gvermi12749.t1 vs. uniprot
Match: A0A7S2ZBU4_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZBU4_9RHOD)

HSP 1 Score: 139 bits (351), Expect = 1.210e-39
Identity = 70/140 (50.00%), Postives = 97/140 (69.29%), Query Frame = 0
Query:    1 MGCASSKDEPRTDGAPSPPWDGHVRPPRAWKVEPAISSQHLQRLRNEFWETRVEGRPEMWQALRFAAESESDELRDETVKAAGLRPANRRCTMQSMFDELGAMYEIPVYALIDPLNLDQQPVHEQFKHAAKAVTDYVNSH 140
            MGC SSK++     A +  WDG V+ P+ W++E AI ++HLQR+R EFWETRVEGR EMW AL  AAE++SDELR + V AAG++PA +R T++ ++DE GA+YE+P+Y L  P N+D +   E+ K A   +  Y  SH
Sbjct:    1 MGCGSSKEDGGR-AAEALSWDGVVKNPKTWELERAIQTEHLQRMRAEFWETRVEGREEMWVALMAAAEADSDELRFQIVDAAGIQPALKRKTLELVYDERGAIYEVPIYCLSAPANIDGEDACEEMKDARFYLQGYYESH 139          
BLAST of Gvermi12749.t1 vs. uniprot
Match: M2WA60_GALSU (F6I1.3 protein n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WA60_GALSU)

HSP 1 Score: 120 bits (301), Expect = 6.940e-32
Identity = 59/107 (55.14%), Postives = 75/107 (70.09%), Query Frame = 0
Query:   14 GAPSPPWDGHVRPPRAWKVEPA---ISSQHLQRLRNEFWETRVEGRPEMWQALRFAAESESDELRDETVKAAGLRPANRRCTMQSMFDELGAMYEIPVYALIDPLNL 117
            G+    W+G V+ P+ WK EP    ++   L+R+R EFW+TR EGR EMWQAL+ AAE+  D LR+E VKAAGL PANR  T++S +DELG  YE+PVY L DP NL
Sbjct:   35 GSTGSTWNGIVQLPKPWKAEPPFGPLTETELKRMREEFWDTRTEGRQEMWQALKAAAETTEDTLRNEIVKAAGLTPANREATLESCYDELGNYYEVPVYCLRDPDNL 141          
BLAST of Gvermi12749.t1 vs. uniprot
Match: A0A0V0R5Y3_PSEPJ (Ubiquitin-like domain-containing protein n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0R5Y3_PSEPJ)

HSP 1 Score: 73.2 bits (178), Expect = 7.690e-13
Identity = 38/102 (37.25%), Postives = 67/102 (65.69%), Query Frame = 0
Query:   24 VRPPRAWKVEPAISSQHLQRLRNEFWETRVEGRPEMWQALRFAAESESDELRDETVKAAGLRPANRRCTMQSMFDELGAMYEIPVYALIDPLNLDQQPVHEQ 125
            ++   ++KV+  ++ + L+R R EFWETRVEG+ + WQAL+ A ES+ ++L    + AAG++  NR  ++Q  +D+ G  Y+IPV+ + DP + + +P  E+
Sbjct:   60 IKRTHSYKVK--VTKEQLERKRQEFWETRVEGKQQTWQALKSAVESD-EKLAIGLLAAAGIKLVNR--SIQISYDDTGHKYDIPVFCINDPYSCEAEPPTEK 156          
BLAST of Gvermi12749.t1 vs. uniprot
Match: A0A1X2GCN1_9FUNG (UBD domain-containing protein n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GCN1_9FUNG)

HSP 1 Score: 66.6 bits (161), Expect = 3.270e-10
Identity = 45/123 (36.59%), Postives = 61/123 (49.59%), Query Frame = 0
Query:    1 MGCASSKDEPRTD-GAPSPPWDGHVRPPRAWKVEPAISSQHLQRLRNEFWETR--VEGRPEMWQALRFAAESESDELRDETVKAAGLR-PANRRCTMQSMFDELGAMYEIPVYALIDPLNLDQ 119
            MGC  S ++  TD G P        R    W  E  ++   L + RN FW+T    EGRPE+WQAL+ A E++   L    + AA ++ P          +DELG  Y IP Y L+DP NL +
Sbjct:    1 MGCCISSEDKSTDHGKP------FNRQAITWHSETPLTRSELLQKRNTFWDTAPFYEGRPEIWQALQAATETDDLTLAQSILDAANIKLPTGNPA--DGCYDELGNRYVIPDYCLVDPSNLKE 115          
BLAST of Gvermi12749.t1 vs. uniprot
Match: A0DGX6_PARTE (Ubiquitin-like domain-containing protein n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0DGX6_PARTE)

HSP 1 Score: 65.5 bits (158), Expect = 6.020e-10
Identity = 33/98 (33.67%), Postives = 58/98 (59.18%), Query Frame = 0
Query:   28 RAWKVEPAISSQHLQRLRNEFWETRVEGRPEMWQALRFAAESESDELRDETVKAAGLRPANRRCTMQSMFDELGAMYEIPVYALIDPLNLDQQPVHEQ 125
            R +  +  I    +++LRN FWETRVEGR E+WQ LR    +E +E     V+ A L+P   + ++Q ++D+LG  Y++P++ + DP+    +   ++
Sbjct:   63 RTFAYKSHIDIAQIEKLRNIFWETRVEGRQEIWQILRSII-NEDEETARFLVQEAELKPI--KDSLQHVYDKLGQKYDVPIFCINDPIEFSAEKFEDR 157          
BLAST of Gvermi12749.t1 vs. uniprot
Match: A0A5J5EML7_9PEZI (Ubiquitin-like domain-containing protein n=1 Tax=Sphaerosporella brunnea TaxID=1250544 RepID=A0A5J5EML7_9PEZI)

HSP 1 Score: 65.1 bits (157), Expect = 6.730e-10
Identity = 40/97 (41.24%), Postives = 50/97 (51.55%), Query Frame = 0
Query:   24 VRPPRAWKVEPAISSQHLQRLRNEFWETRVEGRPEMWQALRFAAESESD---ELRDETVKAAGLRPANRRCTMQSMFDELGAMYEIPVYALIDPLNL 117
            ++P   W+     S+    R R EFWETRV GR E+WQALR A E       EL    V AAGL           ++D+LG  YE+P YA  DP N+
Sbjct:   30 LKPKATWRSPRPRSAATYARRRQEFWETRVTGRAEVWQALRAAGECIRGGQLELAQGIVDAAGLTVPTGDF-FDGVYDDLGCRYELPEYAFADPENV 125          
BLAST of Gvermi12749.t1 vs. uniprot
Match: A0A699HT68_TANCI (UBD domain-containing protein n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699HT68_TANCI)

HSP 1 Score: 62.4 bits (150), Expect = 9.180e-10
Identity = 38/109 (34.86%), Postives = 52/109 (47.71%), Query Frame = 0
Query:   16 PSPPWDGHVRPPRAWKVEPAISSQHLQRLRNEFWETRVE--GRPEMWQALRFAAESESDE----LRDETVKAAGLRPANRRCTMQSMFDELGAMYEIPVYALIDPLNLD 118
            P+ P    VR P  W  +  ISS  LQ +RN FW+   +  GR E+W ALR AAE +       +RD  +    L        M   +D  G  Y +P+Y L +P N+D
Sbjct:    9 PARPNPAQVRKPALWCYDHPISSAQLQEMRNTFWQNAAQAGGRQEIWDALRAAAEGDLRNAEKIIRDNRISLGNL-------DMTVCYDVTGTSYNLPLYVLSEPTNMD 110          
The following BLAST results are available for this feature:
BLAST of Gvermi12749.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IFT2_9FLOR1.710e-7774.00Ubiquitin domain-containing protein 1 n=1 Tax=Grac... [more]
A0A5J4Z2P8_PORPP1.920e-4561.54Ubiquitin domain-containing protein 2 n=1 Tax=Porp... [more]
A0A7S1XEH7_9RHOD2.460e-4454.68Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S2ZBU4_9RHOD1.210e-3950.00Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
M2WA60_GALSU6.940e-3255.14F6I1.3 protein n=2 Tax=Galdieria sulphuraria TaxID... [more]
A0A0V0R5Y3_PSEPJ7.690e-1337.25Ubiquitin-like domain-containing protein n=1 Tax=P... [more]
A0A1X2GCN1_9FUNG3.270e-1036.59UBD domain-containing protein n=1 Tax=Hesseltinell... [more]
A0DGX6_PARTE6.020e-1033.67Ubiquitin-like domain-containing protein n=1 Tax=P... [more]
A0A5J5EML7_9PEZI6.730e-1041.24Ubiquitin-like domain-containing protein n=1 Tax=S... [more]
A0A699HT68_TANCI9.180e-1034.86UBD domain-containing protein n=1 Tax=Tanacetum ci... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032752DC-UbP/UBTD2, N-terminal domainPFAMPF16455UBDcoord: 24..118
e-value: 2.0E-19
score: 69.6
IPR038169DC-UbP/UBTD2, N-terminal domain superfamilyGENE3D1.20.225.20coord: 37..111
e-value: 1.7E-17
score: 65.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31
IPR039869Ubiquitin domain-containing protein 1/2PANTHERPTHR13609UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATEDcoord: 24..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1372690..1373214 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12749.t1Gvermi12749.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1372690..1373214 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12749.t1 ID=Gvermi12749.t1|Name=Gvermi12749.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=151bp
MGCASSKDEPRTDGAPSPPWDGHVRPPRAWKVEPAISSQHLQRLRNEFWE
TRVEGRPEMWQALRFAAESESDELRDETVKAAGLRPANRRCTMQSMFDEL
GAMYEIPVYALIDPLNLDQQPVHEQFKHAAKAVTDYVNSHDKSKRTPRAL
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032752DC-UbP/UBTD2_N
IPR038169DC-UbP/UBTD2_N_sf
IPR039869UBTD1/2