Gvermi12747.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12747.t1
Unique NameGvermi12747.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length377
Homology
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BLAST of Gvermi12747.t1 vs. uniprot
Match: A0A2V3IFX5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFX5_9FLOR)

HSP 1 Score: 125 bits (315), Expect = 1.430e-28
Identity = 70/111 (63.06%), Postives = 81/111 (72.97%), Query Frame = 0 
Query:    2 MSSNLRSRAVRPSHAKQHP-ESLNFHNPRLNLSVDSYNALVVSVAAFVLLLFGFYSLSLFSANHDIVGLHPPLSLHREIGDHFHSHSNRP---DWHDTHYDPPLDEQWQHD 108
            M+S LRSRA++ S  KQ+    +N H  R  LS DSYNALVV+VAAFVLLLFGFYSLSLFSAN  + GL PPLSLHR++GDHF   SNR    DW D HYD P +E W+HD
Sbjct:    1 MASTLRSRALKFSTEKQYQLPGVNVHAQRRKLSDDSYNALVVAVAAFVLLLFGFYSLSLFSANQQLTGLEPPLSLHRDVGDHFSKRSNRARSLDWRDEHYDHPHEEHWEHD 111
The following BLAST results are available for this feature:
BLAST of Gvermi12747.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IFX5_9FLOR1.430e-2863.06Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..154
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..172
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 155..172
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..36
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 37..57
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 58..376
NoneNo IPR availableTMHMMTMhelixcoord: 37..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1368449..1369868 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12747.t1Gvermi12747.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1368449..1369868 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12747.t1 ID=Gvermi12747.t1|Name=Gvermi12747.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=377bp
MMSSNLRSRAVRPSHAKQHPESLNFHNPRLNLSVDSYNALVVSVAAFVLL
LFGFYSLSLFSANHDIVGLHPPLSLHREIGDHFHSHSNRPDWHDTHYDPP
LDEQWQHDHHHRADDEYRDYYEQHPPLEEEHYDPAHDEDKLRYQDYHHDD
YHQQQQPHQPPTTQELNDHVKSTTRMSITRVTIMMANTMRMSTMQASTIQ
VSTMRPNTMLVSTTQASTMRPNTKRASTTQASTIQASTIQASIMQASIMQ
ASTTQSSTTQASIMQARIMLASTTQVTMITLTAPTIMLIQITNDRMSILE
KHIGPLTLPNHPILGISKLHNNKVTIITKRAQKMALDIEHIDTQEFILLP
TTFEKLIDMQLLMSASTRAPPLNPML*
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