Gvermi12735.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12735.t1
Unique NameGvermi12735.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length494
Homology
BLAST of Gvermi12735.t1 vs. uniprot
Match: A0A2V3IJ65_9FLOR (Vesicle-associated membrane protein-associated protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJ65_9FLOR)

HSP 1 Score: 672 bits (1734), Expect = 5.860e-239
Identity = 333/492 (67.68%), Postives = 399/492 (81.10%), Query Frame = 0
Query:    1 MPTILSTPPPAVVPEPSTPPPLHTTNSIAIAQSHRDATENFFTCEPPRRFIFRSQLDKASTETLKITNNSPETLLYKVKTNEHRTYAVKSGCGLIEPHTTAEVQIIQRPLRTFPRAQDVARHRFLVVAAPISSTPNRSTANPNAAVDLWNLVPSSAVRKRTMGVIVKQSAFYIPLDKLVTFKPTTLAFVPSTNPNGSCCSHLDVTNISEYPIVFKMKTTNQMGYVVRPRVGIIDPKQSFRIELSSQPKSKRMDINGEITANPIVPVSRPTSHDKFKLEVAAVHSENLLGNVTPQDLWPRVSAGDISTVLFPVLRNADPRKLSPSELPDRAAHRLQ-DAFKKLNANGSAGKLQLSSSFMDTLEDVLFWTPKILRLRAENDAEQQPSILHLSNISERTLLYRIITKNKGLYEIYPEKDIIAAYDSLNVNVSVQNLKFSSNKWEALSDDASIEVAIIDLKPEENLNKDDNDLDDMWAAIPQKDVLKIKFDVQIRN 491
            MPTIL TPP    P P TPPP+  +     ++S +   + FF C P RR IFRS LDK S +TLKITN S E LLYKVKTNEHRTY VK G G++EP  + EV++IQR LR FPR QD+ARHRFLVV APIS+        P+ A +LW+ VP+++V KRT+GVIV+QSAFYIP+D+L+TFKP+ LAFVPS +PNGSCCSHLDVTNIS++P++FKMKTTNQMGYVVRPRVGI+DPKQ++RIELSSQPKSKRMD NGEITANPIVPVSRPTSHDKFKLEV AV SE+LLGNVTPQDLWPRV  GD+STV+FPVLRNADPRKLSPSELPDRAAHRLQ D    L  NGS+ +++ S SF+DTLED+LFWTPK LRLRA+ND+ QQ SILHLSNISE+TLLYRI T N GLYE +P+ D+I AYDS+N++V+VQNL    + W +LSD ASIEVA I +K E + NKD+NDL+DMW++IP++D++K  F +QI N
Sbjct:    1 MPTILRTPPSGSAPAPKTPPPIKPSQPNGSSESTQTDPDTFFKCHPARRLIFRSALDKHSAQTLKITNTSTEPLLYKVKTNEHRTYVVKFGSGIVEPDCSVEVEVIQRALRVFPRPQDIARHRFLVVTAPISAVSTGGIGKPDNATELWSRVPAASVIKRTLGVIVQQSAFYIPVDQLITFKPSILAFVPSQDPNGSCCSHLDVTNISDFPVLFKMKTTNQMGYVVRPRVGILDPKQTYRIELSSQPKSKRMDANGEITANPIVPVSRPTSHDKFKLEVTAVQSESLLGNVTPQDLWPRVLPGDVSTVVFPVLRNADPRKLSPSELPDRAAHRLQADIDSSLALNGSS-RIRRSGSFVDTLEDILFWTPKTLRLRAQNDSGQQASILHLSNISEKTLLYRIKTPNTGLYEFFPQMDLIPAYDSVNISVNVQNLTVMCDNWVSLSDKASIEVAKIHVKLEGSFNKDENDLEDMWSSIPEEDIMKASFPIQIHN 491          
BLAST of Gvermi12735.t1 vs. uniprot
Match: A0A1R3I7H0_COCAP (Major sperm protein n=1 Tax=Corchorus capsularis TaxID=210143 RepID=A0A1R3I7H0_COCAP)

HSP 1 Score: 80.9 bits (198), Expect = 2.880e-13
Identity = 63/222 (28.38%), Postives = 104/222 (46.85%), Query Frame = 0
Query:   47 PRRFIFRSQLDKASTETLKITNNSPETLLYKVKTNEHRTYAVKSGCGLIEPHTTAEVQIIQRPLRTFPRAQDVARHRFLV--VAAPISSTPNRSTANPNAAVDLWNLVPSSAVRKRTMGVIVKQSAFYIPLDKLVTFKP-----------TTLAFVPSTNPNGSCCSHLDVTNISEYPIVFKMKTTNQMGYVVRPRVGIIDPKQSFRIELSSQ-PKSKRMDI 254
            P    F  +L K S+ +L++TNNS   + + VKT   + Y V+   G++ P +T  V +  +  +  P    + + +FL+  V AP  +T N  T+      D++N      V +  + VI +     +    L+  +P           T L F+       S  S+L +TN SE  + FK+KTTNQ  Y VRP +GI+ P  +  + ++ Q PK    D+
Sbjct:   11 PTELKFLVELRKQSSSSLRLTNNSENCVAFMVKTTNPKKYCVRPNTGIVLPGSTCSVTVTMQAPKELPPDM-LCKDKFLLLSVVAPEGATVNDITS------DMFNKGNGRVVEEFKLRVIYEA----MTAGNLLHIQPALTXXXXXXXXTELKFLVELRKQSS--SYLRLTNNSEKYVAFKVKTTNQKNYCVRPNIGIVLPGSTCSVTVTMQAPKDSLPDM 219          
BLAST of Gvermi12735.t1 vs. uniprot
Match: A0A821LUT7_9BILA (Hypothetical protein n=2 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A821LUT7_9BILA)

HSP 1 Score: 65.1 bits (157), Expect = 1.120e-8
Identity = 31/81 (38.27%), Postives = 48/81 (59.26%), Query Frame = 0
Query:   46 PPRRFIFRSQLDKASTETLKITNNSPETLLYKVKTNEHRTYAVKSGCGLIEPHTTAEVQIIQRPLRTFPRAQDVARHRFLV 126
            P    IF+   +  ST TLK++N+  E L YK+KT   + Y VK   G +EPH TA +Q++ +P  T  +  D ++H+F+V
Sbjct:    7 PNGDLIFKGPFNVVSTTTLKLSNSGNERLAYKIKTTAPKRYCVKPNSGFLEPHGTANIQVMLQP-HTSGQEDDRSKHKFMV 86          
BLAST of Gvermi12735.t1 vs. uniprot
Match: A0A1X2GP17_9FUNG (MSP domain-containing protein n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GP17_9FUNG)

HSP 1 Score: 67.8 bits (164), Expect = 2.160e-8
Identity = 34/107 (31.78%), Postives = 56/107 (52.34%), Query Frame = 0
Query:   46 PPRRFIFRSQLDKASTETLKITNNSPETLLYKVKTNEHRTYAVKSGCGLIEPHTTAEVQIIQRPLRTFPRAQDVARHRFLVVAAPISSTPNRSTANPNAAVDLWNLV 152
            PP    F+  L +   E LK+TNN P  + +KVKT   + Y VK   G+IEP+ + +VQ++ +P +  P      + +F+V  API  +         + ++LW +V
Sbjct:    8 PPNVLGFKRPLTQPIEEYLKVTNNGPVPIAFKVKTTAPKRYCVKPNSGIIEPNVSIDVQVVFQPFKEEPALDTKCKDKFMVQTAPIEES-----WRGYSMMELWGIV 109          
BLAST of Gvermi12735.t1 vs. uniprot
Match: UPI0018FE02A6 (Vesicle-associated membrane protein-associated protein SCS2 n=1 Tax=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) TaxID=559292 RepID=UPI0018FE02A6)

HSP 1 Score: 62.0 bits (149), Expect = 4.370e-8
Identity = 33/104 (31.73%), Postives = 54/104 (51.92%), Query Frame = 0
Query:   47 PRRFIFRSQLDKASTETLKITNNSPETLLYKVKTNEHRTYAVKSGCGLIEPHTTAEVQIIQRPLRTFPRAQDVARHRFLVVAAPISSTPNRSTANPNAAVDLWN 150
            P   +++S L + STE   I+NNS +T+ +KVKT   + Y V+    ++ P  T +VQ+I   L   P A    R +F+V+     + P+    N  A  D+W+
Sbjct:    8 PDVLVYKSPLTEQSTEYASISNNSDQTIAFKVKTTAPKFYCVRPNAAVVAPGETIQVQVIFLGLTEEPAADFKCRDKFMVI-----TLPSPYDLNGKAVADVWS 106          
BLAST of Gvermi12735.t1 vs. uniprot
Match: A0A817J3A4_9BILA (Hypothetical protein n=6 Tax=unclassified Rotaria TaxID=2631648 RepID=A0A817J3A4_9BILA)

HSP 1 Score: 65.1 bits (157), Expect = 5.770e-8
Identity = 31/81 (38.27%), Postives = 48/81 (59.26%), Query Frame = 0
Query:   46 PPRRFIFRSQLDKASTETLKITNNSPETLLYKVKTNEHRTYAVKSGCGLIEPHTTAEVQIIQRPLRTFPRAQDVARHRFLV 126
            P    IF+   +  ST TLK++N+  E L YK+KT   + Y VK   G +EPH TA +Q++ +P  T  +  D ++H+F+V
Sbjct:    7 PNGDLIFKGPFNVVSTTTLKLSNSGNERLAYKIKTTAPKRYCVKPNSGFLEPHGTANIQVMLQP-HTSGQEDDRSKHKFMV 86          
BLAST of Gvermi12735.t1 vs. uniprot
Match: A0A2V3IKQ8_9FLOR (Vesicle-associated protein 1-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKQ8_9FLOR)

HSP 1 Score: 65.1 bits (157), Expect = 6.840e-8
Identity = 49/152 (32.24%), Postives = 68/152 (44.74%), Query Frame = 0
Query:  178 LVTFKPTTLAFVPSTNPNGSCCSH-LDVTNISEYPIVFKMKTTNQMGYVVRPRVGIIDPKQSFRIELSSQPKSKRMDINGEITANPIVPVSRPTSHDKFKLEVAAVHSENLLGNVTPQDLWP-RVSAGDISTVLFPVLRNADPRKLSPSELP 327
            LVT    T  F  ++ P GS  S  L VTN++   I FK+KTTNQ  Y+V+P  G+I P+ S  I ++ QP +   ++               +S DKF L V        L +  P D W    +   +  V F V    DP   SP+  P
Sbjct:   23 LVTVDRQTFRFTVNSAPTGSLISDTLTVTNVATTHIAFKVKTTNQERYIVKPNAGLIAPRGSAEIYIALQPTTVLPELG--------------SSRDKFMLRVIEAPE---LDDTLPADYWQTHETDAAVRDVKFRVAFVTDPHFPSPTNQP 157          
BLAST of Gvermi12735.t1 vs. uniprot
Match: A0A813PCF8_9BILA (Hypothetical protein n=4 Tax=Rotaria sordida TaxID=392033 RepID=A0A813PCF8_9BILA)

HSP 1 Score: 64.3 bits (155), Expect = 1.040e-7
Identity = 30/81 (37.04%), Postives = 48/81 (59.26%), Query Frame = 0
Query:   46 PPRRFIFRSQLDKASTETLKITNNSPETLLYKVKTNEHRTYAVKSGCGLIEPHTTAEVQIIQRPLRTFPRAQDVARHRFLV 126
            P    +F+   +  ST TLK++N+  E L YK+KT   + Y VK   G +EPH TA +Q++ +P  T  +  D ++H+F+V
Sbjct:    7 PNGDLVFKGPFNVVSTTTLKLSNSGNERLAYKIKTTAPKRYCVKPNSGFLEPHGTANIQVMLQP-HTSGQDDDRSKHKFMV 86          
BLAST of Gvermi12735.t1 vs. uniprot
Match: A0A0L0CD52_LUCCU (MSP domain-containing protein n=3 Tax=Lucilia TaxID=7374 RepID=A0A0L0CD52_LUCCU)

HSP 1 Score: 63.5 bits (153), Expect = 1.180e-7
Identity = 34/109 (31.19%), Postives = 56/109 (51.38%), Query Frame = 0
Query:   45 EPPRRFIFRSQLDKASTETLKITNNSPETLLYKVKTNEHRTYAVKSGCGLIEPHTTAEVQIIQRPLRTFPRAQDVARHRFLVVAAPISSTPNRSTANPNAAVDLWNLVP 153
            +PP    F          TLK+TN S ET+L+K+KT   + Y V+   G + P+ +  V+I  +P    P  ++  +H+F+V +  I S  N    +PN  V++W  +P
Sbjct:   15 DPPGELRFIGPFTSPVITTLKLTNPSDETILFKIKTTAPKRYCVRPNFGCVSPNDSVSVEICLQPFNFDPFEKN--KHKFMVQS--IVSPSNEKPQDPNKYVNIWKELP 119          
BLAST of Gvermi12735.t1 vs. uniprot
Match: SCS2_YEAST (Vesicle-associated membrane protein-associated protein SCS2 n=14 Tax=Saccharomyces TaxID=4930 RepID=SCS2_YEAST)

HSP 1 Score: 62.8 bits (151), Expect = 1.960e-7
Identity = 34/104 (32.69%), Postives = 54/104 (51.92%), Query Frame = 0
Query:   47 PRRFIFRSQLDKASTETLKITNNSPETLLYKVKTNEHRTYAVKSGCGLIEPHTTAEVQIIQRPLRTFPRAQDVARHRFLVVAAPISSTPNRSTANPNAAVDLWN 150
            P   +++S L + STE   I+NNS +T+ +KVKT   + Y V+    ++ P  T +VQ+I   L   P A    R +FLV+     + P+    N  A  D+W+
Sbjct:    8 PDVLVYKSPLTEQSTEYASISNNSDQTIAFKVKTTAPKFYCVRPNAAVVAPGETIQVQVIFLGLTEEPAADFKCRDKFLVI-----TLPSPYDLNGKAVADVWS 106          
The following BLAST results are available for this feature:
BLAST of Gvermi12735.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A2V3IJ65_9FLOR5.860e-23967.68Vesicle-associated membrane protein-associated pro... [more]
A0A1R3I7H0_COCAP2.880e-1328.38Major sperm protein n=1 Tax=Corchorus capsularis T... [more]
A0A821LUT7_9BILA1.120e-838.27Hypothetical protein n=2 Tax=Rotaria sp. Silwood2 ... [more]
A0A1X2GP17_9FUNG2.160e-831.78MSP domain-containing protein n=1 Tax=Hesseltinell... [more]
UPI0018FE02A64.370e-831.73Vesicle-associated membrane protein-associated pro... [more]
A0A817J3A4_9BILA5.770e-838.27Hypothetical protein n=6 Tax=unclassified Rotaria ... [more]
A0A2V3IKQ8_9FLOR6.840e-832.24Vesicle-associated protein 1-2 n=1 Tax=Gracilariop... [more]
A0A813PCF8_9BILA1.040e-737.04Hypothetical protein n=4 Tax=Rotaria sordida TaxID... [more]
A0A0L0CD52_LUCCU1.180e-731.19MSP domain-containing protein n=3 Tax=Lucilia TaxI... [more]
SCS2_YEAST1.960e-732.69Vesicle-associated membrane protein-associated pro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 175..309
e-value: 4.7E-16
score: 60.7
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 357..489
e-value: 7.6E-10
score: 40.7
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 34..169
e-value: 2.3E-19
score: 71.5
IPR000535Major sperm protein (MSP) domainPFAMPF00635Motile_Spermcoord: 44..133
e-value: 2.6E-17
score: 62.6
coord: 179..286
e-value: 2.2E-13
score: 50.0
IPR000535Major sperm protein (MSP) domainPROSITEPS50202MSPcoord: 363..490
score: 10.231751
IPR000535Major sperm protein (MSP) domainPROSITEPS50202MSPcoord: 178..315
score: 17.575569
IPR000535Major sperm protein (MSP) domainPROSITEPS50202MSPcoord: 41..167
score: 20.132792
IPR016763Vesicle-associated membrane-protein-associated proteinPANTHERPTHR10809VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEINcoord: 195..301
IPR016763Vesicle-associated membrane-protein-associated proteinPANTHERPTHR10809VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEINcoord: 38..170
NoneNo IPR availablePANTHERPTHR10809:SF12VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN B/Ccoord: 195..301
coord: 38..170
IPR008962PapD-like superfamilySUPERFAMILY49354PapD-likecoord: 40..164
IPR008962PapD-like superfamilySUPERFAMILY49354PapD-likecoord: 177..311
IPR008962PapD-like superfamilySUPERFAMILY49354PapD-likecoord: 364..487

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1279661..1281142 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12735.t1Gvermi12735.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1279661..1281142 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12735.t1 ID=Gvermi12735.t1|Name=Gvermi12735.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=494bp
MPTILSTPPPAVVPEPSTPPPLHTTNSIAIAQSHRDATENFFTCEPPRRF
IFRSQLDKASTETLKITNNSPETLLYKVKTNEHRTYAVKSGCGLIEPHTT
AEVQIIQRPLRTFPRAQDVARHRFLVVAAPISSTPNRSTANPNAAVDLWN
LVPSSAVRKRTMGVIVKQSAFYIPLDKLVTFKPTTLAFVPSTNPNGSCCS
HLDVTNISEYPIVFKMKTTNQMGYVVRPRVGIIDPKQSFRIELSSQPKSK
RMDINGEITANPIVPVSRPTSHDKFKLEVAAVHSENLLGNVTPQDLWPRV
SAGDISTVLFPVLRNADPRKLSPSELPDRAAHRLQDAFKKLNANGSAGKL
QLSSSFMDTLEDVLFWTPKILRLRAENDAEQQPSILHLSNISERTLLYRI
ITKNKGLYEIYPEKDIIAAYDSLNVNVSVQNLKFSSNKWEALSDDASIEV
AIIDLKPEENLNKDDNDLDDMWAAIPQKDVLKIKFDVQIRNVI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR000535MSP_dom
IPR016763VAP
IPR008962PapD-like_sf