Gvermi12729.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12729.t1
Unique NameGvermi12729.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length217
Homology
BLAST of Gvermi12729.t1 vs. uniprot
Match: A0A7J7HLD2_CAMSI (Cyclin n=2 Tax=Camellia sinensis TaxID=4442 RepID=A0A7J7HLD2_CAMSI)

HSP 1 Score: 103 bits (257), Expect = 6.830e-24
Identity = 62/177 (35.03%), Postives = 108/177 (61.02%), Query Frame = 0
Query:   15 TPALGDSDVLFLAALSTALELRVNLDPFAFPSTCEPLSVFFCVEEPDISTYDYLERLFRFASCSKSAFVLMLIYIDRFLV-SGAAPFNPFSMHRIIISALVVAIKSTEDVVSTSSHYARVGGAASAAEMNTLEIVFFECIEFEGFVSPTLYGTYHAQLE---LFVPLVCIPRTPTNM 187
            +P++    + FL++L   +    +L+  + P   + +SVF  +  P IS   YLER+F++A+CS S F++  +Y+DRF+    + P N FS+HR++I++++VA+K  +D+   +++YA+VGG  S AEMN LE+ F   + F   V+PT + +Y A L+   L  P + +P T  N+
Sbjct:    6 SPSVMPKLITFLSSLLHRVAESNDLNRLSRP---QKISVFHGLTRPAISIESYLERIFKYANCSPSCFIVAYVYLDRFVQRQPSLPINSFSVHRLLITSVMVAVKFMDDIYYNNAYYAKVGGI-STAEMNFLEVDFLFGLGFHLNVTPTTFHSYCAYLQREMLVQPPLDLPETSLNI 178          
BLAST of Gvermi12729.t1 vs. uniprot
Match: UPI001262D9AF (cyclin-U4-1-like n=1 Tax=Pistacia vera TaxID=55513 RepID=UPI001262D9AF)

HSP 1 Score: 102 bits (253), Expect = 2.730e-23
Identity = 63/167 (37.72%), Postives = 103/167 (61.68%), Query Frame = 0
Query:   26 LAALSTALELRVNLDPFAFPSTCEPLSVFFCVEEPDISTYDYLERLFRFASCSKSAFVLMLIYIDRFLVSGAA-PFNPFSMHRIIISALVVAIKSTEDVVSTSSHYARVGGAASAAEMNTLEIVFFECIEFEGFVSPTLYGTYHA--QLELFV--PLVCIPRTPTNM 187
            +A LS+ L+   + + F+     + +SVF  +  P IS   YLER+F++A+CS S FV+  +Y+DRF     + P N F++HR++I++++V+ K  +D+   ++ YA+VGG  S AEMN LE+ F   + F+  V+PT + TY +  Q E+F+  PL  +P  P NM
Sbjct:   20 IAILSSLLQRVADSNDFSRRLQPQKISVFHGLTRPTISLQSYLERIFKYANCSPSCFVVSYVYLDRFAQKQPSLPINSFNVHRLLITSVLVSAKFMDDIYYNNAFYAKVGGI-STAEMNLLEVDFLFGLGFQLNVTPTTFQTYCSFLQKEMFLQSPLH-LPEPPLNM 184          
BLAST of Gvermi12729.t1 vs. uniprot
Match: U5FUK6_POPTR (Cyclin n=9 Tax=Saliceae TaxID=238069 RepID=U5FUK6_POPTR)

HSP 1 Score: 101 bits (252), Expect = 5.810e-23
Identity = 62/189 (32.80%), Postives = 111/189 (58.73%), Query Frame = 0
Query:   12 QTRTPALGDSDVL-----FLAALSTALELRVNLDPFAFPSTCEPLSVFFCVEEPDISTYDYLERLFRFASCSKSAFVLMLIYIDRFLVSGAA-PFNPFSMHRIIISALVVAIKSTEDVVSTSSHYARVGGAASAAEMNTLEIVFFECIEFEGFVSPTLYGTY--HAQLELFV----PLVCIPRTPTNMQ 188
            QTR   L ++ V+     FL++L   +    +L    +P   + +S+F  +  P IS  +YLER+F++A+CS S FV+  +Y+DRF    +  P N F++HR++I+++++++K  +D+   ++ YA+VGG  S AEMN LE+ F   + F+  V+PT++  Y  + Q E+ +    P+V +P     +Q
Sbjct:   22 QTRMAELAETTVMPKVITFLSSLLQRVAESNDLSQQLYP---QKVSIFHGLSRPPISIQNYLERIFKYANCSPSCFVVAYVYLDRFAQRQSCFPINSFNVHRLLITSVLISVKFMDDIYYNNAFYAKVGGI-STAEMNLLEVDFLFGLGFQLNVTPTMFHAYCSYLQREMLIQSPLPIVDLPLNMARLQ 206          
BLAST of Gvermi12729.t1 vs. uniprot
Match: A0A5N6Q8D0_9ASTR (Uncharacterized protein n=2 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6Q8D0_9ASTR)

HSP 1 Score: 100 bits (249), Expect = 7.800e-23
Identity = 59/165 (35.76%), Postives = 100/165 (60.61%), Query Frame = 0
Query:   26 LAALSTALELRVNLDPFAFPSTCEPLSVFFCVEEPDISTYDYLERLFRFASCSKSAFVLMLIYIDRFLVSGA-APFNPFSMHRIIISALVVAIKSTEDVVSTSSHYARVGGAASAAEMNTLEIVFFECIEFEGFVSPTLYGTY--HAQLEL---FVPLVCIPRTP 184
            ++ LS+ L+     +    P   + LS+F+ +  PDIS  +YLER+FR+A+CS S +V+  +Y+DRF+      P N F++HR+++++++V+IK  ED+   +++YARVGG  S AE+N LE+ F   + F+  V+   +  Y  + Q E+   F PL  +P  P
Sbjct:   10 ISLLSSLLQRVAECNDLNRPLHTQKLSIFYGLIRPDISIQNYLERIFRYANCSPSCYVVAYVYLDRFVKKQPYLPINSFNVHRLLVASVLVSIKFMEDICYDNAYYARVGGI-STAEINLLEVDFLFGLGFQLNVTIDTFCDYCTYLQTEMLLRFPPLCSLPPVP 173          
BLAST of Gvermi12729.t1 vs. uniprot
Match: UPI001CFADCBE (cyclin-U4-1-like n=1 Tax=Mangifera indica TaxID=29780 RepID=UPI001CFADCBE)

HSP 1 Score: 100 bits (248), Expect = 1.490e-22
Identity = 61/166 (36.75%), Postives = 99/166 (59.64%), Query Frame = 0
Query:   26 LAALSTALELRVNLDPFAFPSTCEPLSVFFCVEEPDISTYDYLERLFRFASCSKSAFVLMLIYIDRF-LVSGAAPFNPFSMHRIIISALVVAIKSTEDVVSTSSHYARVGGAASAAEMNTLEIVFFECIEFEGFVSPTLYGTYHA--QLELFVPL-VCIPRTPTNM 187
            ++ LS  L+   + + F+       LS F  +  P IS   YLER+F++A+CS S FV+  +Y+DRF L   + P N F++HR++I++++V+ K  +D+   ++ YA+VGG  S AEMN LE+ F   + F   V+PT + TY +  Q E+F+   + +P  P NM
Sbjct:   20 ISILSFLLQRVADSNDFSCRLQPHKLSAFHGLTRPTISLESYLERIFKYANCSPSCFVIAYVYLDRFALKQPSLPINSFTVHRLLITSVLVSAKFMDDIYCNNAFYAKVGGI-STAEMNLLEVDFLFGLGFHLNVTPTTFQTYCSFLQKEMFLQFPLHLPDPPLNM 184          
BLAST of Gvermi12729.t1 vs. uniprot
Match: A0A2V3II09_9FLOR (Cyclin-U4-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II09_9FLOR)

HSP 1 Score: 103 bits (256), Expect = 2.280e-22
Identity = 68/158 (43.04%), Postives = 92/158 (58.23%), Query Frame = 0
Query:   19 GDSDVLFLAALSTALELRV--NLDPFAFPSTCEPLSVFFCVEEPDISTYDYLERLFRFASCSKSAFVLMLIYIDRFL-VSGAAPFNPFSMHRIIISALVVAIKSTEDVVSTSSHYARVGGAASAAEMNTLEIVFFECIEFEGFVSPTLYGTYHAQLEL 173
            G S   F+   S  L+LR   N   F  P   E  SVFF V +PDI T DYL+RL  +A CS SAFV+MLIY++R   ++      PF+MHR++I+ALV+A K  +D    + HYA+VGG AS  EMN LE+   + ++   FV+      Y A+L L
Sbjct:  182 GMSKEQFVENASAHLDLRARQNEGKFPLPLYSEHESVFFSVVKPDIPTSDYLKRLVTYAYCSPSAFVVMLIYMNRTARIACRLMVTPFNMHRLLITALVLACKFLDDKCYANEHYAKVGGIASVQEMNRLELQLLKYLD-RLFVTE---DEYRAELNL 335          
BLAST of Gvermi12729.t1 vs. uniprot
Match: A0A2C9UIK6_MANES (Cyclin n=1 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9UIK6_MANES)

HSP 1 Score: 99.4 bits (246), Expect = 2.560e-22
Identity = 57/166 (34.34%), Postives = 100/166 (60.24%), Query Frame = 0
Query:   26 LAALSTALELRVNLDPFAFPSTCEPLSVFFCVEEPDISTYDYLERLFRFASCSKSAFVLMLIYIDRFLVSGAA-PFNPFSMHRIIISALVVAIKSTEDVVSTSSHYARVGGAASAAEMNTLEIVFFECIEFEGFVSPTLYGTYHAQLE---LFVPLVCIPRTPTNM 187
            +A LS+ L+     +        + +SVF  +  P+IS  +YLER+F++A+CS S FV+  +Y+DRF     + P N F++HR++I+++++++K  +D+   +++YA+VGG  S +EMN LE+ F   + F+  V+PT + TY + L+   L    V +   P NM
Sbjct:   14 IAFLSSLLQRVAESNDLTHQLYPQRISVFHGLTRPNISVQNYLERIFKYANCSPSCFVVAYVYLDRFAQKQPSFPINSFNVHRLLITSVLLSVKFLDDIYYNNAYYAKVGGI-STSEMNVLEVDFLFGLGFQLNVTPTTFHTYCSYLQKEMLMQSAVDLVDNPLNM 178          
BLAST of Gvermi12729.t1 vs. uniprot
Match: A0A2I0X1W9_9ASPA (Cyclin n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0X1W9_9ASPA)

HSP 1 Score: 99.0 bits (245), Expect = 3.860e-22
Identity = 58/143 (40.56%), Postives = 93/143 (65.03%), Query Frame = 0
Query:   46 STCEPLSVFFCVEEPDISTYDYLERLFRFASCSKSAFVLMLIYIDRFLV-SGAAPFNPFSMHRIIISALVVAIKSTEDVVSTSSHYARVGGAASAAEMNTLEIVFFECIEFEGFVSPTLYGTYHAQLELFVPLVCIPRTPTNM 187
            S    +S FF +E+P+IS   YLER+FRFA CS S FV+  IY+DRFL+   +   + F++HR +I+A++ A+K  +D    ++++A+VGG  S AEMN LEI F   + F+  V+P ++G+Y + LE  + +   P TP+++
Sbjct:   44 SPASAISAFFGLEKPEISIACYLERIFRFAHCSTSCFVVAYIYLDRFLLLHPSISVDSFNVHRFLITAVLTAVKFIDDRCYNNAYFAKVGGI-SLAEMNHLEIDFLFGLRFDLNVTPIVFGSYCSILEREMKMAN-PHTPSSV 184          
BLAST of Gvermi12729.t1 vs. uniprot
Match: D8M727_BLAHO (Uncharacterized protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M727_BLAHO)

HSP 1 Score: 98.6 bits (244), Expect = 5.420e-22
Identity = 53/123 (43.09%), Postives = 77/123 (62.60%), Query Frame = 0
Query:   49 EPLSVFFCVEEPDISTYDYLERLFRFASCSKSAFVLMLIYIDRFLVSGAAPFNPFSMHRIIISALVVAIKSTEDVVSTSSHYARVGGAASAAEMNTLEIVFFECIEFEGFVSPTLYGTYHAQL 171
            +P++ F     PDIS  DY+ERL+R++ CS    VL LIYIDRF+ S     N  ++HRI+++++V+A K+ +D   T++HYARVGG     E+N LEI F   I F  +VS   Y  YH ++
Sbjct:   31 QPITRFTAQSPPDISVRDYMERLYRYSKCSVECLVLALIYIDRFIQSSNIQVNSLTIHRILLTSVVLAAKTYDDNFYTNTHYARVGGIP-VEELNCLEIEFLFSIGFSLYVSCEDYLRYHTEI 152          
BLAST of Gvermi12729.t1 vs. uniprot
Match: UPI000B7701D7 (cyclin-U4-1-like n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=UPI000B7701D7)

HSP 1 Score: 98.2 bits (243), Expect = 7.090e-22
Identity = 55/151 (36.42%), Postives = 95/151 (62.91%), Query Frame = 0
Query:   23 VLFLAALSTALELRVNLDPFAFPSTCEPLSVFFCVEEPDISTYDYLERLFRFASCSKSAFVLMLIYIDRFLV-SGAAPFNPFSMHRIIISALVVAIKSTEDVVSTSSHYARVGGAASAAEMNTLEIVFFECIEFEGFVSPTLYGTYHAQLE 172
            + FL++L   +    +L    +P   + +SVF  +  P+IS   YLER+F++A+CS S FV+  +Y+DRF     + P N F++HR++I++++V++K  +D+   +++YA+VGG  S AEMN LE+ F   + F+  V+PT + TY   L+
Sbjct:   14 IRFLSSLLQRVAESNDLTRQLYP---QRISVFHGLTRPNISIQSYLERIFKYANCSPSCFVVAFVYLDRFAQRQPSIPINSFNVHRLLITSVLVSVKFLDDIHYNNAYYAKVGGI-STAEMNLLEVDFLFGLGFQLNVTPTTFRTYCTYLQ 160          
The following BLAST results are available for this feature:
BLAST of Gvermi12729.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7J7HLD2_CAMSI6.830e-2435.03Cyclin n=2 Tax=Camellia sinensis TaxID=4442 RepID=... [more]
UPI001262D9AF2.730e-2337.72cyclin-U4-1-like n=1 Tax=Pistacia vera TaxID=55513... [more]
U5FUK6_POPTR5.810e-2332.80Cyclin n=9 Tax=Saliceae TaxID=238069 RepID=U5FUK6_... [more]
A0A5N6Q8D0_9ASTR7.800e-2335.76Uncharacterized protein n=2 Tax=Mikania micrantha ... [more]
UPI001CFADCBE1.490e-2236.75cyclin-U4-1-like n=1 Tax=Mangifera indica TaxID=29... [more]
A0A2V3II09_9FLOR2.280e-2243.04Cyclin-U4-1 n=1 Tax=Gracilariopsis chorda TaxID=44... [more]
A0A2C9UIK6_MANES2.560e-2234.34Cyclin n=1 Tax=Manihot esculenta TaxID=3983 RepID=... [more]
A0A2I0X1W9_9ASPA3.860e-2240.56Cyclin n=1 Tax=Dendrobium catenatum TaxID=906689 R... [more]
D8M727_BLAHO5.420e-2243.09Uncharacterized protein n=1 Tax=Blastocystis homin... [more]
UPI000B7701D77.090e-2236.42cyclin-U4-1-like n=1 Tax=Hevea brasiliensis TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013922Cyclin PHO80-likePFAMPF08613Cyclincoord: 49..156
e-value: 4.7E-21
score: 75.8
IPR013922Cyclin PHO80-likePANTHERPTHR15615UNCHARACTERIZEDcoord: 50..174
NoneNo IPR availableGENE3D1.10.472.10coord: 14..178
e-value: 7.2E-30
score: 106.0
IPR013763Cyclin-likeCDDcd00043CYCLINcoord: 65..146
e-value: 6.88991E-4
score: 35.6773
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 65..155

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1236858..1237508 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12729.t1Gvermi12729.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1236858..1237508 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12729.t1 ID=Gvermi12729.t1|Name=Gvermi12729.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=217bp
MDTTNPQILSPQTRTPALGDSDVLFLAALSTALELRVNLDPFAFPSTCEP
LSVFFCVEEPDISTYDYLERLFRFASCSKSAFVLMLIYIDRFLVSGAAPF
NPFSMHRIIISALVVAIKSTEDVVSTSSHYARVGGAASAAEMNTLEIVFF
ECIEFEGFVSPTLYGTYHAQLELFVPLVCIPRTPTNMQYLRGLARFSEKG
SMQLDGLRCHRSARNP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013922Cyclin_PHO80-like
IPR013763Cyclin-like
IPR036915Cyclin-like_sf