Gvermi12722.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12722.t1
Unique NameGvermi12722.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length222
Homology
The following BLAST results are available for this feature:
BLAST of Gvermi12722.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 163..191
e-value: 85.0
score: 5.0
coord: 134..157
e-value: 0.21
score: 20.7
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 136..157
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 134..162
score: 10.886503
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 108..187
e-value: 2.2E-9
score: 39.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 134..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1208805..1209685 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12722.t1Gvermi12722.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1208805..1209685 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12722.t1 ID=Gvermi12722.t1|Name=Gvermi12722.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=222bp
MFSQSPSHNPHPPRELRPGRLPLHERTLYVQGVPILTLPPDFYLTEADIL
IDREFKRRARANRDNDHASKRVCLPSTATGVMNPSSGALPSQLRNVAGFP
PSYNLHHEADALQFVPSDAAFSHWSQAPRAANKWTCTSCSFQFAYKDHLA
RHRAFVHEGKTESKCSHCSKVYVEFKSLRRHINQLDLWRSHILTAHFGES
YAHRISWDTWRCLVRSEQHNA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf