Gvermi12713.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12713.t1
Unique NameGvermi12713.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length222
Homology
BLAST of Gvermi12713.t1 vs. uniprot
Match: A0A2V3ILF0_9FLOR (Peroxiredoxin-6 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILF0_9FLOR)

HSP 1 Score: 369 bits (947), Expect = 4.920e-128
Identity = 181/222 (81.53%), Postives = 199/222 (89.64%), Query Frame = 0
Query:    1 MAPLIGETAPDFTADSTDGELTLHEYIKGGWAVLFSHPADFTPVCTTELARVSQLLPEFEKRNVKCLALSCDDAASHRAWVPDICAYA-KRDGAALGYPIIADADRSIARAYGMLPAAEGDGMPMTVRSVFVIGPDRKVKLSLTYPASTGRNFDEILRVIDSLQLAVSSKVATPVDWTKGGECVVLPSVGDDQAAELFPKGVSALPLPSGKPYLRMTPMPDA 221
            MAPLIGETAP+FTADST+GE+TLH+YIK  WA+LFSHPADFTPVCTTELARVSQLLPEF+KRNVKCLALSCD +ASH AW+PDIC++  K +  ALGYPIIAD  R+IAR YGMLPA+E  GM MTVRSVFVIGPD KVKLSLTYPASTGRNFDEI+RVIDSLQLAVSSKVATPVDW KG ECVVLPSV D+QA +LFPKG +A+ LPSGK YLRMTPMPDA
Sbjct:    1 MAPLIGETAPNFTADSTEGEITLHDYIKHSWAILFSHPADFTPVCTTELARVSQLLPEFQKRNVKCLALSCDSSASHNAWIPDICSFGGKSESTALGYPIIADEHRTIARTYGMLPASESSGMAMTVRSVFVIGPDAKVKLSLTYPASTGRNFDEIVRVIDSLQLAVSSKVATPVDWKKGDECVVLPSVSDEQAEQLFPKGFNAMNLPSGKAYLRMTPMPDA 222          
BLAST of Gvermi12713.t1 vs. uniprot
Match: R7Q5I9_CHOCR (Thioredoxin domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5I9_CHOCR)

HSP 1 Score: 315 bits (806), Expect = 1.680e-106
Identity = 161/228 (70.61%), Postives = 181/228 (79.39%), Query Frame = 0
Query:    1 MAPLIGETAPDFTADSTDGELTLHEYIKGGWAVLFSHPADFTPVCTTELARVSQLLPEFEKRNVKCLALSCDDAASHRAWVPDICAYAKRDGAALG-----YPIIADADRSIARAYGMLPA---AEGDGMPMTVRSVFVIGPDRKVKLSLTYPASTGRNFDEILRVIDSLQLAVSSKVATPVDWTKGGECVVLPSVGDDQAAELFPKGVSALPLPSGKPYLRMTPMPD 220
            MAPL+GE AP+F+A++T G +  H YI+  WAVLFSHPADFTPVCTTELARVSQLLPEFE RNVK LALSCDD  SH  W+ DI AY K  G  +G     +PIIADA R +AR YGM+PA    +  GMPMTVRSVFV+G D+K+KLSLTYPASTGR+FDEILRVIDSLQLAVS KVATPVDWTKG +CVVLPSV +D+A ELFPKG     LPSGK YLRMTP PD
Sbjct:    1 MAPLLGEIAPNFSAETTHGPIDFHTYIESSWAVLFSHPADFTPVCTTELARVSQLLPEFEARNVKVLALSCDDLQSHTGWLADISAYGK--GCPMGPKGEGFPIIADASRDVARLYGMIPADHPVDDKGMPMTVRSVFVVGLDKKIKLSLTYPASTGRSFDEILRVIDSLQLAVSHKVATPVDWTKGKDCVVLPSVSNDKAQELFPKGFKPAELPSGKQYLRMTPQPD 226          
BLAST of Gvermi12713.t1 vs. uniprot
Match: A7RMT9_NEMVE (Predicted protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7RMT9_NEMVE)

HSP 1 Score: 272 bits (696), Expect = 8.160e-90
Identity = 134/223 (60.09%), Postives = 164/223 (73.54%), Query Frame = 0
Query:    3 PLIGETAPDFTADSTDGELTLHEYIKGGWAVLFSHPADFTPVCTTELARVSQLLPEFEKRNVKCLALSCDDAASHRAWVPDICAY---AKRDGAALGYPIIADADRSIARAYGMLPAAEGD--GMPMTVRSVFVIGPDRKVKLSLTYPASTGRNFDEILRVIDSLQLAVSSKVATPVDWTKGGECVVLPSVGDDQAAELFPKGVSALPLPSGKPYLRMTPMPD 220
            P +G+  P+FTADST G +  H++IK  WA+LFSHPAD+TPVCTTEL RV+QL PEF+KR VK   LSCDDA SHR WV DI  Y     +  A   YPIIAD  R +A   GM+   E D  G+P+T R+VF+IGPD+K+KLS+ YPA+TGRNFDEILRVIDSLQL  + KVATPVDW  GG+C+V+PS+  ++   +FPKGV AL LPSGK YLR TP P+
Sbjct:    2 PNLGDEFPNFTADSTIGTINFHDFIKDSWAILFSHPADYTPVCTTELGRVAQLEPEFKKRGVKMAGLSCDDAESHRGWVKDITKYNLEQNKSSAKFNYPIIADERRELAVKLGMVDPDEKDSKGLPLTCRAVFIIGPDKKLKLSILYPATTGRNFDEILRVIDSLQLTATKKVATPVDWKLGGDCMVIPSIKPEEEGTIFPKGVRALDLPSGKRYLRYTPQPE 224          
BLAST of Gvermi12713.t1 vs. uniprot
Match: A0A0D6QYK0_ARACU (Peroxiredoxin n=2 Tax=Araucariaceae TaxID=25664 RepID=A0A0D6QYK0_ARACU)

HSP 1 Score: 271 bits (694), Expect = 1.480e-89
Identity = 135/222 (60.81%), Postives = 166/222 (74.77%), Query Frame = 0
Query:    1 MAPLIGETAPDFTADSTDGELTLHEYIKGGWAVLFSHPADFTPVCTTELARVSQLLPEFEKRNVKCLALSCDDAASHRAWVPDICAYAKRDGAALGYPIIADADRSIARAYGMLPAAEGD--GMPMTVRSVFVIGPDRKVKLSLTYPASTGRNFDEILRVIDSLQLAVSSKVATPVDWTKGGECVVLPSVGDDQAAELFPKGVSALPLPSGKPYLRMTPMPD 220
            M   +G+T PDF ADS+ G++ L+++I   WA+LFSHPADFTPVCTTEL  V +L+PEFEKR VK LALSC+DA SH+AW+ DI +Y    GA + YPIIAD +R IA  YGML  AE D  G+P+T R+VFVIGPD+ VKLS+ YPA+TGRNF EILRV+DSL L     VATPVDW  G +C+VLPS+ D  AAE FPKG   + +PSGK Y+R+TP PD
Sbjct:    1 MGMKLGDTVPDFEADSSRGKIHLYDFIHNSWAILFSHPADFTPVCTTELGAVGKLMPEFEKRGVKVLALSCNDAESHKAWISDIESYTP--GARVSYPIIADPNREIALKYGMLDPAEKDAAGIPLTARAVFVIGPDKTVKLSMLYPATTGRNFAEILRVLDSLLLTAYYSVATPVDWKAGDKCMVLPSISDGAAAEKFPKGFETVGVPSGKGYIRLTPQPD 220          
BLAST of Gvermi12713.t1 vs. uniprot
Match: A0A076FKQ5_9MAXI (Peroxiredoxin 6 (Fragment) n=1 Tax=Paracyclopina nana TaxID=565004 RepID=A0A076FKQ5_9MAXI)

HSP 1 Score: 266 bits (680), Expect = 1.930e-87
Identity = 127/217 (58.53%), Postives = 159/217 (73.27%), Query Frame = 0
Query:    5 IGETAPDFTADSTDGELTLHEYIKGGWAVLFSHPADFTPVCTTELARVSQLLPEFEKRNVKCLALSCDDAASHRAWVPDICAYAKRDGAALGYPIIADADRSIARAYGMLP--AAEGDGMPMTVRSVFVIGPDRKVKLSLTYPASTGRNFDEILRVIDSLQLAVSSKVATPVDWTKGGECVVLPSVGDDQAAELFPKGVSALPLPSGKPYLRMTPMP 219
            +G+  PDF A++TDG +  HE++ G WA+LFSHPAD+TPVCTTEL RV +L PEFEKR +K  ALSCD+   H+ W+ DI AY   +     YPIIAD DRS+A AYGM+   A +  GMP+T R+VF+IGPD+K+KLS+ YPA+TGRNFDEILRVIDSLQL    +VATP DW  G  C+V+PSV  ++   LFPKGV+   +PSGK YLR TP P
Sbjct:    6 LGDIVPDFEAETTDGPMKFHEWLGGSWAILFSHPADYTPVCTTELGRVQKLAPEFEKRGIKLAALSCDEVEHHKGWIEDIKAYNSLES--FSYPIIADVDRSVATAYGMMDPVAQDSQGMPLTCRAVFIIGPDKKLKLSILYPATTGRNFDEILRVIDSLQLTAQKRVATPADWKNGLPCMVVPSVKPEEVEALFPKGVTVHEVPSGKQYLRTTPHP 220          
BLAST of Gvermi12713.t1 vs. uniprot
Match: A0A087TSZ5_STEMI (Peroxiredoxin-6 (Fragment) n=1 Tax=Stegodyphus mimosarum TaxID=407821 RepID=A0A087TSZ5_STEMI)

HSP 1 Score: 266 bits (679), Expect = 2.560e-87
Identity = 124/215 (57.67%), Postives = 165/215 (76.74%), Query Frame = 0
Query:    5 IGETAPDFTADSTDGELTLHEYIKGGWAVLFSHPADFTPVCTTELARVSQLLPEFEKRNVKCLALSCDDAASHRAWVPDICAYAKRDGAALGYPIIADADRSIARAYGMLPAAEGD--GMPMTVRSVFVIGPDRKVKLSLTYPASTGRNFDEILRVIDSLQLAVSSKVATPVDWTKGGECVVLPSVGDDQAAELFPKGVSALPLPSGKPYLRMTP 217
            +G+  PDF A++T+G +  H++I   WA+LFSHPADFTPVCTTEL +V++L PEFEKR VK +ALSCD+  SH+ W+ DI AYA   G    YPII+D  R +A + GM+   E D  G+P+T R+VF+IGPD+++KLS+ YPASTGRNFDE+LRV+DSLQL  +  VATPVDW +GG+C+VLP++ ++   +LFPKGV+   LPSGKPYLR+TP
Sbjct:    4 LGDIFPDFAAETTEGTIKFHDWINDAWAILFSHPADFTPVCTTELGQVAKLAPEFEKRGVKLIALSCDNVESHKKWIEDIKAYACLKGDGFPYPIISDEKRELAVSLGMVDPDEKDKAGLPLTCRAVFIIGPDKRLKLSMLYPASTGRNFDEVLRVVDSLQLTHNKNVATPVDWKQGGDCMVLPNIKNEDLPKLFPKGVTVKELPSGKPYLRITP 218          
BLAST of Gvermi12713.t1 vs. uniprot
Match: UPI0001CB9DB4 (peroxiredoxin-6-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CB9DB4)

HSP 1 Score: 265 bits (678), Expect = 3.630e-87
Identity = 127/217 (58.53%), Postives = 164/217 (75.58%), Query Frame = 0
Query:    5 IGETAPDFTADSTDGELTLHEYIKGGWAVLFSHPADFTPVCTTELARVSQLLPEFEKRNVKCLALSCDDAASHRAWVPDICAYAKRDGAALGYPIIADADRSIARAYGMLPAAE--GDGMPMTVRSVFVIGPDRKVKLSLTYPASTGRNFDEILRVIDSLQLAVSSKVATPVDWTKGGECVVLPSVGDDQAAELFPKGVSALPLPSGKPYLRMTPMP 219
            +G+  P+F AD+T GE+  H+++ G WA+LFSHPAD+TPVCTTEL+RV +L+PEF+KRNVK +ALSCD  A H+ W+ DI AY+   G  + YPIIAD  R +A   GM+   E    G+P+T R+VF+IGPD+K+KLS  YPA+TGRNFDEILRV+DSLQL  + KVATPVDW  G +C+V+P+V  +  A+LFPKGV   P+PSGK YLRMTP P
Sbjct:    4 LGDEFPNFKADTTTGEIKFHDWLDGSWAILFSHPADYTPVCTTELSRVEKLVPEFKKRNVKLIALSCDSVADHKGWIEDIKAYSGVAG--VSYPIIADEKRDLAVKLGMVDPDEKTAAGLPLTCRAVFIIGPDKKLKLSFLYPATTGRNFDEILRVVDSLQLTATKKVATPVDWKPGEKCMVVPTVKPEDVAKLFPKGVEIKPVPSGKQYLRMTPQP 218          
BLAST of Gvermi12713.t1 vs. uniprot
Match: UPI001CF40163 (peroxiredoxin-6-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF40163)

HSP 1 Score: 265 bits (677), Expect = 5.510e-87
Identity = 128/218 (58.72%), Postives = 163/218 (74.77%), Query Frame = 0
Query:    5 IGETAPDFTADSTDGELTLHEYIKGGWAVLFSHPADFTPVCTTELARVSQLLPEFEKRNVKCLALSCDDAASHRAWVPDICAYAKRDGAALGYPIIADADRSIARAYGMLPAAEGD--GMPMTVRSVFVIGPDRKVKLSLTYPASTGRNFDEILRVIDSLQLAVSSKVATPVDWTKGGECVVLPSVGDDQAAELFPKGVSALPLPSGKPYLRMTPMPD 220
            +G+  P+F  DS++G++  +E+I   WA+LFSHPAD+TPVCTTEL RVS++ PEF KRNVK  ALSCD A SH+ W+ DI  + K   A   YPIIAD DR +A   GM+   E D  GMP+T R+VF+IGPD+K+KLSL YPA+TGRNFDEILRV+DSLQL    KVATP DW  GG+C+VLP+V  ++AA+LFPKGV+   +PSGK Y+R TP P+
Sbjct:    4 LGDEFPNFEKDSSEGKIKFYEFIGDSWAILFSHPADYTPVCTTELGRVSEIAPEFAKRNVKLCALSCDSAESHKGWIEDIKHHVKSK-AKFPYPIIADEDRDLAVKLGMIDPDEKDAQGMPLTARAVFIIGPDKKLKLSLLYPATTGRNFDEILRVVDSLQLTAEKKVATPADWKSGGDCMVLPTVKPEEAAKLFPKGVTTEDMPSGKGYMRFTPQPE 220          
BLAST of Gvermi12713.t1 vs. uniprot
Match: A0A1S3KCL4_LINUN (peroxiredoxin-6 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3KCL4_LINUN)

HSP 1 Score: 263 bits (671), Expect = 4.350e-86
Identity = 125/217 (57.60%), Postives = 167/217 (76.96%), Query Frame = 0
Query:    5 IGETAPDFTADSTDGELTLHEYIKGGWAVLFSHPADFTPVCTTELARVSQLLPEFEKRNVKCLALSCDDAASHRAWVPDICAYAKRDGAALGYPIIADADRSIARAYGMLPAAEGD--GMPMTVRSVFVIGPDRKVKLSLTYPASTGRNFDEILRVIDSLQLAVSSKVATPVDWTKGGECVVLPSVGDDQAAELFPKGVSALPLPSGKPYLRMTPMP 219
            +G+  P+F A +T G+   H++I   WA+LFSHPAD+TPVCTTEL RV++L+PEF KR VK +ALSCD+  SH+ W+ DI +Y K  G    YPII+D+DRS+A + GM+  AE D  G+P+T R+VF+IGPD+K+KLS+ YPA+TGRNF EILRV+DSLQL V+ KVATP DW  GG+C+VLP++ +D+AA+LFP     +P+PS KPYLR+TP P
Sbjct:    4 LGDVFPNFDAKTTHGDFKFHDWIGDSWAILFSHPADYTPVCTTELGRVTKLVPEFNKRGVKLIALSCDNVESHKGWIEDIKSYMKDQGD-FPYPIISDSDRSLAVSLGMVDPAEKDAAGLPLTCRAVFIIGPDKKLKLSMLYPATTGRNFTEILRVVDSLQLTVNQKVATPADWVNGGDCMVLPTIKEDEAAKLFPNH-KTIPVPSKKPYLRITPQP 218          
BLAST of Gvermi12713.t1 vs. uniprot
Match: A0A6L2P9P2_COPFO (Thioredoxin domain-containing protein n=1 Tax=Coptotermes formosanus TaxID=36987 RepID=A0A6L2P9P2_COPFO)

HSP 1 Score: 263 bits (671), Expect = 4.500e-86
Identity = 126/217 (58.06%), Postives = 160/217 (73.73%), Query Frame = 0
Query:    5 IGETAPDFTADSTDGELTLHEYIKGGWAVLFSHPADFTPVCTTELARVSQLLPEFEKRNVKCLALSCDDAASHRAWVPDICAYAKRDGAALGYPIIADADRSIARAYGMLPAAEGD--GMPMTVRSVFVIGPDRKVKLSLTYPASTGRNFDEILRVIDSLQLAVSSKVATPVDWTKGGECVVLPSVGDDQAAELFPKGVSALPLPSGKPYLRMTPMP 219
            +G   P+F A++T G +  H++I   WA+LFSHPADFTPVCTTEL RV+ L+ EF+KR VK +ALSCD   SH+ W+ DI +YAK  G    YPIIAD +R +A   GML   E D  G+P+T R+VFVIGPD+ ++LS+ YPA+TGRNFDEILR +DSLQL    KVATP DW  GGEC+VLP++ D++A ELFPKG   + LPSGKPY+R+TP P
Sbjct:    4 LGAKFPNFKANTTIGPIQFHDWIGESWAILFSHPADFTPVCTTELGRVANLISEFDKRGVKVIALSCDSVDSHKKWIQDIKSYAKHSGDGFPYPIIADENRDLAVQLGMLDPVERDKDGLPLTCRAVFVIGPDKTLRLSILYPATTGRNFDEILRAVDSLQLTEKRKVATPADWKSGGECMVLPTLKDEEANELFPKGFYVVNLPSGKPYVRITPQP 220          
The following BLAST results are available for this feature:
BLAST of Gvermi12713.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ILF0_9FLOR4.920e-12881.53Peroxiredoxin-6 n=1 Tax=Gracilariopsis chorda TaxI... [more]
R7Q5I9_CHOCR1.680e-10670.61Thioredoxin domain-containing protein n=1 Tax=Chon... [more]
A7RMT9_NEMVE8.160e-9060.09Predicted protein n=1 Tax=Nematostella vectensis T... [more]
A0A0D6QYK0_ARACU1.480e-8960.81Peroxiredoxin n=2 Tax=Araucariaceae TaxID=25664 Re... [more]
A0A076FKQ5_9MAXI1.930e-8758.53Peroxiredoxin 6 (Fragment) n=1 Tax=Paracyclopina n... [more]
A0A087TSZ5_STEMI2.560e-8757.67Peroxiredoxin-6 (Fragment) n=1 Tax=Stegodyphus mim... [more]
UPI0001CB9DB43.630e-8758.53peroxiredoxin-6-like n=1 Tax=Saccoglossus kowalevs... [more]
UPI001CF401635.510e-8758.72peroxiredoxin-6-like n=1 Tax=Acropora millepora Ta... [more]
A0A1S3KCL4_LINUN4.350e-8657.60peroxiredoxin-6 n=1 Tax=Lingula unguis TaxID=7574 ... [more]
A0A6L2P9P2_COPFO4.500e-8658.06Thioredoxin domain-containing protein n=1 Tax=Copt... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.1020.10Antioxidant, Horf6; Chain A, domain2coord: 151..219
e-value: 7.4E-30
score: 104.7
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 3..150
e-value: 7.1E-51
score: 173.8
NoneNo IPR availablePANTHERPTHR43503MCG48959-RELATEDcoord: 5..220
NoneNo IPR availablePANTHERPTHR43503:SF12PEROXIREDOXIN PRX1, PUTATIVE-RELATEDcoord: 5..220
IPR019479Peroxiredoxin, C-terminalPFAMPF104171-cysPrx_Ccoord: 161..197
e-value: 1.4E-5
score: 24.8
IPR024706Peroxiredoxin, AhpC-typePIRSFPIRSF000239AHPCcoord: 1..218
e-value: 2.4E-71
score: 236.5
IPR000866Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidantPFAMPF00578AhpC-TSAcoord: 5..139
e-value: 3.2E-32
score: 111.1
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 3..164
score: 18.637177
IPR0450201-Cys peroxiredoxinCDDcd03016PRX_1cyscoord: 5..217
e-value: 2.77495E-116
score: 327.96
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 3..216

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1104114..1104779 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12713.t1Gvermi12713.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1104114..1104779 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12713.t1 ID=Gvermi12713.t1|Name=Gvermi12713.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=222bp
MAPLIGETAPDFTADSTDGELTLHEYIKGGWAVLFSHPADFTPVCTTELA
RVSQLLPEFEKRNVKCLALSCDDAASHRAWVPDICAYAKRDGAALGYPII
ADADRSIARAYGMLPAAEGDGMPMTVRSVFVIGPDRKVKLSLTYPASTGR
NFDEILRVIDSLQLAVSSKVATPVDWTKGGECVVLPSVGDDQAAELFPKG
VSALPLPSGKPYLRMTPMPDA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019479Peroxiredoxin_C
IPR024706Peroxiredoxin_AhpC-typ
IPR000866AhpC/TSA
IPR013766Thioredoxin_domain
IPR045020PRX_1cys
IPR036249Thioredoxin-like_sf