Gvermi12707.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12707.t1
Unique NameGvermi12707.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length753
Homology
BLAST of Gvermi12707.t1 vs. uniprot
Match: A0A2V3IP75_9FLOR (Fe-ADH domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP75_9FLOR)

HSP 1 Score: 961 bits (2485), Expect = 0.000e+0
Identity = 467/754 (61.94%), Postives = 609/754 (80.77%), Query Frame = 0
Query:    1 MSSGEKATANKTQFRDQHNLSGVLPQGAYTVLLRVKMKRELNAAEEKIILAEYARKSCAEQGVIRCDVLFRVDKLGIAKDDFYEIWISFADARAYTEHERTSHAAKLRLCLEDPCGGDSSKLLTKLAHSVSLLRLVRPEISEWVSAFDYEPENTTPI--TSKLQSSLKVKDDPDRIRRSLDMLISSVGLEDVIVLVATACAFSIESTRSLRSECDEYLTDIEKSAGIVRTGILVDKNDPYRIIMMTVHDSADKAGACFDMELATDFITDDGWTVKRCHAVFPDKVGWEKKLSEADQKRFLGDVVDDRFEKLVEGPGALVKYERAEAEESKMRLLQGAGSFDMLKQCIKSMTQPSTGIVKALLIGGWNPSRVHPVLVQIEYDRYNDPFETQFRFGPPVNSSEIRTVDVRRAMEAVADYCPDIIIGYGGGTVMDMAKLLGRLGKASNSDLEMCFNSIDGAAEDDAAAIAVAISSRPIPVILISSTVGSGAEMIEWCIVAGQRKDGAIRRLPLYFYDRPGAVRLVTEKTAIQEPRLISPRRLDGIHASQGALELVCLAMDTVMSLHERLEEQASKFAVRGLRQAYRVVMDARREPESGSGHSRDPLVEAKTVIGLALDGLGRPGVCQRLCLAVVDSLVDGRLPTAFRQVLTRVTIAVVEECIENRAEEARRAFSEVLKATRHNHRKELVADMLRKAEDCEVSLLPRLGVVRRKIPHVAKRVSGYLQSETLSALERYLCQVEVLERVLWRAIAQEYEL 752
            MSSG+ A AN  Q  ++ +LS VLP+GAYTV+++V+++ EL    +K++L+EYARK+CAEQGVIRCDVLF+V+KLG+AKDDFYEIW SF D R+Y EHERT HA+KLRLCL++P GGD+SKLLTKLAH+V+LLR VRP ++EWVSAFDY  ++T+ +  T     S+K   D +R+RRSL+MLISSVG+EDV++LVA A AFSIESTR+LRSEC++YLT+ E+SAG+VRTG+LVDK+DPY+I++MTVHD  D+ GACFD+ELA+D+IT+DGW V+RC +VFPDKVGWEKKLSE DQ+++LGDV++D FE +    G LVKY+R + E+ KMRL+ GAGSF+ LK+ I+SMT     +V+A+ + GWN SR++P+LVQIEYDRY DP E  F FG    S+EI+T D+R+AM+ VA+Y PD+IIGYGGGTVMDMAKL+ R+  A+ +++E    +IDGAAE +A  I + + S+P+PV+LI +T+GSGAEMIEWC+VA ++ DG++RR+PLYF D PG+VR  TEKT IQE RL+SP RL G+H SQGAL+LV L +D +++LHERLEEQA KFA+RG+RQAYRV+MDARREP + +G SRDPLV+A+T IGLALDG+GRPGVC R+CLA++DSLVDGR  T FRQVLTR +IAV++EC+E++       F +VL+AT+   R++L+ DMLRKAEDC+VSLLP LG VRR IP  A RV+ YL  E LS LE Y  Q EV+ER++ RA+ QEYEL
Sbjct:    1 MSSGDHAIANDAQNENRQDLSNVLPRGAYTVIMQVRLRSELGVQAQKVLLSEYARKTCAEQGVIRCDVLFQVNKLGLAKDDFYEIWTSFTDPRSYLEHERTIHASKLRLCLDNPHGGDNSKLLTKLAHNVTLLRPVRPNLAEWVSAFDYATDDTSSVGATELSGGSMKAHQDSNRVRRSLEMLISSVGMEDVVILVARASAFSIESTRALRSECEQYLTETERSAGVVRTGLLVDKSDPYKIVLMTVHDGNDRDGACFDLELASDYITEDGWAVQRCLSVFPDKVGWEKKLSEDDQRKYLGDVLEDSFESVTSPQGGLVKYDRGDPEDPKMRLIHGAGSFESLKESIRSMTGRPADLVRAMFVCGWNESRLYPLLVQIEYDRYKDPGEIHFHFGATAYSTEIKTQDLRKAMKEVAEYRPDVIIGYGGGTVMDMAKLIARVANATENEIEEYLTTIDGAAEAEAMGIGLRVVSKPMPVVLIPTTIGSGAEMIEWCVVAARKDDGSLRRIPLYFQDVPGSVREPTEKTVIQESRLVSPSRLHGLHTSQGALQLVGLGIDALIALHERLEEQAFKFAIRGIRQAYRVIMDARREPTNATGQSRDPLVDARTFIGLALDGVGRPGVCVRICLALLDSLVDGRSSTVFRQVLTRTSIAVLQECVESKNAAGSETFKKVLQATKQVSRQDLILDMLRKAEDCDVSLLPMLGSVRRTIPESAARVALYLSGEKLSPLETYFSQEEVIERIMHRAMDQEYEL 754          
BLAST of Gvermi12707.t1 vs. uniprot
Match: R7QEU6_CHOCR (Fe-ADH domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEU6_CHOCR)

HSP 1 Score: 335 bits (860), Expect = 2.080e-103
Identity = 196/504 (38.89%), Postives = 286/504 (56.75%), Query Frame = 0
Query:  260 LATDFITDDGWTVKRCHAVFPDKVGWEKKLSEADQKR---------FLGDVVDDRFEKLVEGPGALVKYERAEAEESKMRLLQGAGSFDMLKQCIKSMTQPSTGIVKALLIGGWNPSRVHPVLVQIEYDRYNDPFETQFRFGPPVNSSEIRTVDVRRAMEAVADYCPDIIIGYGGGTVMDMAKLLGRLGKASNSDLEMCFNSIDGAAEDDAAAIAVAISSRPIPVILISSTVGSGAEMIEWCIVAGQRKDGAIRRLPLYFYDRPGAVRLVTEKTAIQEPRLISPRRLDGIHASQGALELVCLAMDTVMSLHERLEEQASKFAVRGLRQAYRVVMDARREPESGSGHSRDPLVEAKTVIGLALDGLGRPGVCQRLCLAVVDSLVDGRLPTAFRQVLTRVTIAVVEECIENRAEEARRAFSE-VLKATRHNHRKELVADMLRKAEDCEVSLLPRLGVVRRKIPHVAKR-VSGYLQSETLSALERYLCQVEVLERVLWRAIAQEYEL 752
            +A D I DDGW+V R   VFPDK+GWEK  +  DQ+          FLG V +     L+  P +           S  RLLQGAG+FD LK+ I+ +T    G +K+++I GWN  RV P+LVQ++  +  DP    F+FG  V   +     +++    + ++ PD+I+GYGGG VMDM K LG LG AS  +++     I+ AA+     + V++S+RPIPV+LI +T+G+GAEM + C+       GA RR+ + F      +R+  ++  + + RLI PR L GIHA+ GAL L+C  +D ++SL+++   Q  K A   +     V+MD  REP   SG +RDPL  A+T +GLA D  G+ G+  +L LA VD ++D   P  FR +  RVT A++ + I    +EA R F++ V KA      ++ V  +LR+AED +V LLPRLG++ R +P  A   V   L    LS+LE  L    +L+ VL  AI Q+YEL
Sbjct:    1 MAADLIDDDGWSVSRYFPVFPDKIGWEKPSTLLDQEEEPAGDEALSFLGPVGEAPEGVLITAPSSAP----LSIPTSDCRLLQGAGAFDELKKVIREITGKEDGEIKSMIICGWNAGRVQPLLVQLQLVKEKDPGVISFKFGLSVEDCDASIERLKKGTAFIKEHEPDVILGYGGGAVMDMTKALGLLGNASFDEIDESVRQINAAADTCMPRVRVSVSTRPIPVVLIPTTIGAGAEMTDLCVFKANLATGAPRRICVDFGSENNVLRIANDRVILSDSRLIGPRILYGIHAAHGALMLICRGIDVLLSLYDQAGHQGVKQAEEAVAGTSEVLMDIYREPRKASGQTRDPLAYAQTKVGLAADCAGKLGLVAKLSLAAVDEIIDELYPRCFRAIFIRVTAALLTKIISLEKDEACRIFADHVAKAMLVQTPQQAVQRLLRRAEDVDVPLLPRLGLLHRTVPSAAAHAVKAILLEPELSSLEHRLADETLLQDVLHDAIDQDYEL 500          
BLAST of Gvermi12707.t1 vs. uniprot
Match: A0A5J4ZAA2_PORPP (Alcohol dehydrogenase 4 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4ZAA2_PORPP)

HSP 1 Score: 114 bits (286), Expect = 1.420e-22
Identity = 115/419 (27.45%), Postives = 196/419 (46.78%), Query Frame = 0
Query:  188 EDVIVLVATACAFSIESTRSLRSECDEYLTDIEKSAGIVRTGILVDKNDPYRIIMMTVHDSAD-KAGACFDMELATDFITDDGWTVKRCHAVFPDKVGW----------EKKLSEADQKRFLGDV--------VDDRFEKLVEGPGALVKYERAEAEE-----------SKMRLLQGAGSFDMLKQCIKSMT----QPSTGIVKALLIGGWNPSRVHPVLVQIEYDRYNDPFETQFRFGPPVNSSEIRTVD-----VRRAMEAVADYCPDIIIGYGGGTVMDMAKLLGRL-GK-ASNSDLEMCFNSIDGAAEDDAAAIAVAISSRPI---PVILISSTVGSGAEMIEWCIVAGQRKDGAIRRLPLYFYDRPGAVRLVT---EKTAIQEPRLISPRRLDGIHASQGALELVCLAMDTVMS 559
            EDV+VL A++   S    R L  E   ++  +EK+  I+   +LVD+     + ++  + S D + G  FD  LA + ++DDGW V    + FPD+ GW           ++  + +Q++   DV        VDD       G  A  +++  + E+           SK+RL+ G G+ + + + + ++      PS   V+  +I GWN +R  P+  +++  +  +    Q R G  +++      D     ++R  E    +  D +IGYGGGTV+D AK++G L GK AS  D+E   +++     +    +A  I  R I   PV L  +  GSGAE+ E  +++       IR   ++  DR  A RL       T + +PRL   R L G  A+ G L   C+ +++++S
Sbjct:  189 EDVVVLFASSQPDSERDFRPLVQEARVHVRALEKARSILWGSVLVDETSK-SVTVVCAYASVDCEEGVGFDTTLADELVSDDGWLVDSFWSTFPDREGWGAPYVIGGVQNEQEHKREQQQQNTDVDYASVSSNVDD-------GDRAQTRWQTRQDEKPPSRDPTGPLASKIRLVMGFGALESITKRLLAINGGRADPSKP-VRVFVITGWNAARADPLFWELK--KSVERGSVQLRAGRGISAGWFGLHDTGLGEIQRLAEEARAWGADCVIGYGGGTVLDAAKIVGVLAGKGASERDIENFGHNVRTFLLERRRTLAPVIIPRYIQTLPVFLFPTVFGSGAEVEETTVLSIPGASERIRLTMVHEDDREEARRLDRLGPRMTLLFDPRLGGARLLPGF-AALGGLNAACMCIESMLS 595          
BLAST of Gvermi12707.t1 vs. uniprot
Match: A0A7S0ZFT0_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZFT0_9RHOD)

HSP 1 Score: 112 bits (279), Expect = 9.090e-22
Identity = 136/574 (23.69%), Postives = 253/574 (44.08%), Query Frame = 0
Query:  189 DVIVLVATACAFSIESTRSLRSECDEYLTDIEKSAGIVRTGILVDKNDPYRIIMMTVHDS--ADKAGACFDMELATDFITDDGWTVKRCHAVFPDKVGWEKKL-------------SEADQKRFLGDVVDDRFEKLVEGPGALVKYERAEAEESKMRLLQGAGSF----DMLKQCIKSMTQPSTGIVKALLIGGWNPSRVHPVLVQIEYDRYNDPFETQFRFGPPVNSSEIRT-----VDVRRAMEAVADYCPDIIIGYGGGTVMDMAKLLGRLGK--ASNSDLEMCFNSIDGAAEDDA---AAIAVAISSRPIPVILISSTVGSGAEMIEWCIVAGQRKDGAIRRLPLYFYDRPGAVRLVTEKTAIQEPRLISPR---RLDGIHASQGALELVCLAMDTVMSLHERLEEQASKFAVRGLRQAYRVVMDARREPESGSGHSRDPLVEAKTVIGLALDGLGRPGVCQRLCLAVVDSLVDGRLPTAFRQVLTRVT-IAVVEECIENRAEEAR--RAFSEVLKATRHNHRKELVADMLRKAEDCEVSLLPRLGVVRRKIP---HVAKRVSGYLQSET 724
            +V V++A A A +   +RSL     +++ ++E     + + +LV  ++  R+I +  + S  +++  A FD  LA   I D GWTV   +A+FP   GW+  L             SE++  R+  +   D  E +V   G L +         K +++ G G+     D + QC +          +  ++ GWN SR  P++  ++  +  D  + ++RFG  V+S + R       D+ R +    ++  D +IGYGGGT +D AK++  L    +S  + E    ++  A  +     A I +     P+P+ L  +  GSGAE+ + C++   R      R+ +       AV   +EK + +   LI PR   RL    A+ G L   C+ ++ +++ +      ++  A  GL +A   +  A+ +    +  S   L++A    GLA +  G  GV       V+      +  TA+ ++L  +  +AV E  +E+ +E+    +  + ++    H   ++L+  ++   E  E+ LL    + +  +    HVA    G     T
Sbjct:  221 NVCVIIAAARAENKTESRSLIKIVRDHVQELESRKEALWSSVLVSADE--RVIAICAYSSVSSEEHSAVFDTSLADHLIADPGWTVTFFNALFPCTSGWDSPLVLPSENKKSSHNSSESEASRWQTEA--DTKENVVADDGPLSR---------KSKMVFGVGALETICDRIIQCDRK---------RVYIVTGWNQSRADPLVWVLQ--KACDDGKLEYRFGFGVSSGKYRVHESGLADLERLVNDAREWGADCVIGYGGGTALDAAKMVSLLASKYSSEHETENFVKNVRQALLEQRRTFAEIVLPEQYEPLPLFLFPTMFGSGAEVSD-CVILRDRGVSDRIRVAIQNSHSETAVSS-SEKKSPRVTLLIDPRLAVRLKASLAALGGLSAACMCIEALIARNRT--RMSAALAADGLARAAANIQAAKADATDATAVSE--LLQAMLYGGLAREVTGF-GVAASF---VIQLGAHFQFTTAYARILPALLEVAVEEASMESNSEQLGMIQNCARIVTQKEHATSRDLIEWVINTTESLELELLEDPSLTKDLVDDMVHVALNGGGLYPKAT 760          
The following BLAST results are available for this feature:
BLAST of Gvermi12707.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IP75_9FLOR0.000e+061.94Fe-ADH domain-containing protein n=1 Tax=Gracilari... [more]
R7QEU6_CHOCR2.080e-10338.89Fe-ADH domain-containing protein n=1 Tax=Chondrus ... [more]
A0A5J4ZAA2_PORPP1.420e-2227.45Alcohol dehydrogenase 4 n=1 Tax=Porphyridium purpu... [more]
A0A7S0ZFT0_9RHOD9.090e-2223.69Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.1970coord: 319..507
e-value: 6.4E-14
score: 53.6
NoneNo IPR availableSUPERFAMILY56796Dehydroquinate synthase-likecoord: 403..500
IPR001670Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldAPFAMPF00465Fe-ADHcoord: 397..716
e-value: 5.0E-13
score: 48.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1079876..1082134 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12707.t1Gvermi12707.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1079876..1082134 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12707.t1 ID=Gvermi12707.t1|Name=Gvermi12707.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=753bp
MSSGEKATANKTQFRDQHNLSGVLPQGAYTVLLRVKMKRELNAAEEKIIL
AEYARKSCAEQGVIRCDVLFRVDKLGIAKDDFYEIWISFADARAYTEHER
TSHAAKLRLCLEDPCGGDSSKLLTKLAHSVSLLRLVRPEISEWVSAFDYE
PENTTPITSKLQSSLKVKDDPDRIRRSLDMLISSVGLEDVIVLVATACAF
SIESTRSLRSECDEYLTDIEKSAGIVRTGILVDKNDPYRIIMMTVHDSAD
KAGACFDMELATDFITDDGWTVKRCHAVFPDKVGWEKKLSEADQKRFLGD
VVDDRFEKLVEGPGALVKYERAEAEESKMRLLQGAGSFDMLKQCIKSMTQ
PSTGIVKALLIGGWNPSRVHPVLVQIEYDRYNDPFETQFRFGPPVNSSEI
RTVDVRRAMEAVADYCPDIIIGYGGGTVMDMAKLLGRLGKASNSDLEMCF
NSIDGAAEDDAAAIAVAISSRPIPVILISSTVGSGAEMIEWCIVAGQRKD
GAIRRLPLYFYDRPGAVRLVTEKTAIQEPRLISPRRLDGIHASQGALELV
CLAMDTVMSLHERLEEQASKFAVRGLRQAYRVVMDARREPESGSGHSRDP
LVEAKTVIGLALDGLGRPGVCQRLCLAVVDSLVDGRLPTAFRQVLTRVTI
AVVEECIENRAEEARRAFSEVLKATRHNHRKELVADMLRKAEDCEVSLLP
RLGVVRRKIPHVAKRVSGYLQSETLSALERYLCQVEVLERVLWRAIAQEY
EL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001670ADH_Fe/GldA