Gvermi12690.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12690.t1
Unique NameGvermi12690.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length221
Homology
BLAST of Gvermi12690.t1 vs. uniprot
Match: A0A2V3J6U1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6U1_9FLOR)

HSP 1 Score: 295 bits (754), Expect = 1.070e-98
Identity = 145/213 (68.08%), Postives = 170/213 (79.81%), Query Frame = 0
Query:    9 LLAFVVPVLAQHTSNHVCMNRCNADRSLSVRECQHPVTRDICEVREC-DGGFSCSLAENSFLIANVQLPLLEMVVEYTWSPEQRDLDTSTRFLDANVGYSCNNPSPYVEFGGDNTSNGGSEVVVIDFETARQDGKWSGRTGVAAYAGWYNSDNQGAAQMKVSLRRKSDGGVAGGATLSARIQPGTQSNCSAHNVAEVKIVRGAQHTLVTLQQA 220
            LLA VVP+LAQH SN VC NRCN DR+LS REC HPVTR +C V EC D G+SCS+  NSF+I+N QL LLE V+EYTWSPEQRDLDTSTRFLD NVG+SC++ + Y++FGGDNTS GG+EV VID E ARQDGKW   T + + AGW+ SDNQG AQMKV LRRKSDGG+A  A++S RI PGTQ  CS HNVA VKI+RG+ HT VTL++A
Sbjct:    9 LLASVVPILAQHASNDVCPNRCNTDRTLSDRECDHPVTRSLCAVEECEDNGYSCSMPGNSFMISNNQLSLLEFVIEYTWSPEQRDLDTSTRFLDGNVGFSCSSANDYLDFGGDNTSKGGTEVAVIDVEKARQDGKWEDSTAIISNAGWFASDNQGGAQMKVYLRRKSDGGLAEEASVSDRINPGTQRTCSPHNVATVKIIRGSLHTRVTLEKA 221          
BLAST of Gvermi12690.t1 vs. uniprot
Match: A0A2V3ICG8_9FLOR (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICG8_9FLOR)

HSP 1 Score: 250 bits (639), Expect = 1.960e-80
Identity = 121/183 (66.12%), Postives = 145/183 (79.23%), Query Frame = 0
Query:   39 RECQHPVTRDICEVRECDG-GFSCSLAENSFLIANVQLPLLEMVVEYTWSPEQRDLDTSTRFLDANVGYSCNNPSPYVEFGGDNTSNGGSEVVVIDFETARQDGKWSGRTGVAAYAGWYNSDNQGAAQMKVSLRRKSDGGVAGGATLSARIQPGTQSNCSAHNVAEVKIVRGAQHTLVTLQQA 220
            REC HPVTR +C V EC+  G+SCS+  NSF+I+N QLPLLE V+EYTWSPEQRDLD STRFLD NVG+ C  P+ Y++FGGDNTSNG +EVVVID E ARQD KW   T + + A W+ SDNQG AQM+V LRRKSDGG+A  A++S RI PGTQSNCS+H VA VKI+RG+ HT VTL++A
Sbjct:   94 RECNHPVTRSVCAVEECENNGYSCSMRGNSFMISNNQLPLLEFVIEYTWSPEQRDLDKSTRFLDGNVGFRCTGPNDYLDFGGDNTSNGETEVVVIDVEKARQDSKWEDSTAIISNARWFASDNQGGAQMRVYLRRKSDGGLAEEASVSDRINPGTQSNCSSHKVAAVKIIRGSMHTRVTLEKA 276          
BLAST of Gvermi12690.t1 vs. uniprot
Match: A0A2V3IDC2_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDC2_9FLOR)

HSP 1 Score: 201 bits (510), Expect = 1.490e-61
Identity = 107/223 (47.98%), Postives = 139/223 (62.33%), Query Frame = 0
Query:    4 FSALCLLAFVVPVLAQHTSNHVCMNRCNADRSLSVRECQHPVTRDICEVRECDG------GFSCSLAENSFLIANVQLPLLEMVVEYTWSPEQRDLDTSTRFLDANVGYSCNNPSPYVEFGGDNTSNGGSEVVVIDFETARQDGKWSGRTGVAAYAGWYNSDNQGAAQMKVSLRRKSDGGVAGGATLSARIQPGTQSNCSAHNVAEVKIVRGAQHTLVTLQQA 220
            F AL   AF +  +       +C NRCNA+R +S REC   VTR +C V  C        GF C + +NSF+IAN  LP LE VVEY+WS  Q DLDTSTRFLDANVG+ C+    Y+ F GD+ S+GG E + ID   A ++ + SG T VAA+AGW+ S+N+G A +KV LR+KSD  +  GA LS+ I PGTQ+ C+A  V  V+I+R   HT   L +A
Sbjct:   12 FFALAATAFAIQTV------DMCPNRCNANRPMSQRECSLAVTRGVCAVESCSPPAYNRTGFICKMPQNSFIIANTNLPQLEFVVEYSWSSTQSDLDTSTRFLDANVGFRCSPDKDYIAFSGDDVSSGGKETITIDVMEAFEEYQLSGSTSVAAFAGWHGSENEGDATLKVFLRKKSDQALISGAVLSSTISPGTQNGCAATAVGTVQIIRAQHHTRFALVEA 228          
BLAST of Gvermi12690.t1 vs. uniprot
Match: A0A2V3J5L0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5L0_9FLOR)

HSP 1 Score: 195 bits (496), Expect = 1.730e-59
Identity = 108/223 (48.43%), Postives = 137/223 (61.43%), Query Frame = 0
Query:    4 FSALCLLAFVVPVLAQHTSNHVCMNRCNADRSLSVRECQHPVTRDICEVRECDG------GFSCSLAENSFLIANVQLPLLEMVVEYTWSPEQRDLDTSTRFLDANVGYSCNNPSPYVEFGGDNTSNGGSEVVVIDFETARQDGKWSGRTGVAAYAGWYNSDNQGAAQMKVSLRRKSDGGVAGGATLSARIQPGTQSNCSAHNVAEVKIVRGAQHTLVTLQQA 220
            F AL   AF +  +       +C NRCN +R++S REC   VTR +C V  C        GF C +  NSF+I N  LPLLE VVEY+WS  Q DLDTSTRFLDANVGYSC+    YV F GD+ S GG E + ID   A ++ + SG T VA +AGW+ ++++G A +KV LR+KSD  +  GA LS+ I PGTQ  C+A  V  V+IVR   HT  TL +A
Sbjct:    8 FFALAATAFAIQTV------DMCPNRCNTNRAMSQRECSVAVTRGVCSVDSCSPPAYNQTGFICRMPRNSFIIPNTNLPLLEFVVEYSWSSSQSDLDTSTRFLDANVGYSCSPDKNYVAFSGDDVSYGGKESITIDVLEAFEEYQLSGSTSVATFAGWHGNEDEGDATLKVFLRKKSDLALIPGAVLSSTINPGTQYGCAATAVGTVQIVRAQHHTRFTLVEA 224          
BLAST of Gvermi12690.t1 vs. uniprot
Match: A0A2V3IS11_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS11_9FLOR)

HSP 1 Score: 181 bits (459), Expect = 6.970e-54
Identity = 100/219 (45.66%), Postives = 129/219 (58.90%), Query Frame = 0
Query:    9 LLAFVVPVLAQHTSN----HVCMNRCNADRSLSVRECQHPVTRDICEVREC------DGGFSCSLAENSFLIANVQLPLLEMVVEYTWSPEQRDLDTSTRFLDANVGYSCNNPSPYVEFGGDNTSNGGSEVVVIDFETARQDGKWSGRTGVAAYAGWYNSDNQGAAQMKVSLRRKSDGGVAGGATLSARIQPGTQSNCSAHNVAEVKIVRGAQHTLVTL 217
            LL F V ++   T +     +C N+C  +  + +REC+      +C VR C      D GFSCSL E SFL+ N +L   EMV+ Y W   +RDLDTSTRFL ANVG+ C   S Y+ + GD++ NGG E VV+DF+ AR+DG W+GRT +  +AGW+ S  QG A + V +RR  +     G  L A I PGTQ  CS H VA VKI RG   T VTL
Sbjct:    6 LLCFFVLIICVFTEDPPVFDICPNQCYKNSRMPIRECRRSNLAHLCSVRRCSYSGQEDNGFSCSLPERSFLLKNSELWQWEMVITYWWESGKRDLDTSTRFLGANVGFKCGKNSKYLRWLGDSSKNGGDEQVVVDFDKARRDGLWTGRTSIQLHAGWHGSQQQGMAHVVVGMRRTDN--HEEGNNLYAFIYPGTQRTCSPHQVAAVKIFRGRHFTRVTL 222          
The following BLAST results are available for this feature:
BLAST of Gvermi12690.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3J6U1_9FLOR1.070e-9868.08Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ICG8_9FLOR1.960e-8066.12Uncharacterized protein n=3 Tax=Gracilariopsis cho... [more]
A0A2V3IDC2_9FLOR1.490e-6147.98Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3J5L0_9FLOR1.730e-5948.43Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IS11_9FLOR6.970e-5445.66Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..220
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:944433..945095 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12690.t1Gvermi12690.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 944433..945095 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12690.t1 ID=Gvermi12690.t1|Name=Gvermi12690.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=221bp
MKFFSALCLLAFVVPVLAQHTSNHVCMNRCNADRSLSVRECQHPVTRDIC
EVRECDGGFSCSLAENSFLIANVQLPLLEMVVEYTWSPEQRDLDTSTRFL
DANVGYSCNNPSPYVEFGGDNTSNGGSEVVVIDFETARQDGKWSGRTGVA
AYAGWYNSDNQGAAQMKVSLRRKSDGGVAGGATLSARIQPGTQSNCSAHN
VAEVKIVRGAQHTLVTLQQA*
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