Gvermi12684.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12684.t1
Unique NameGvermi12684.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length251
Homology
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BLAST of Gvermi12684.t1 vs. uniprot
Match: A0A2V3IQR0_9FLOR (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQR0_9FLOR)

HSP 1 Score: 306 bits (783), Expect = 3.570e-102
Identity = 156/243 (64.20%), Postives = 195/243 (80.25%), Query Frame = 0 
Query:    8 VSLFVAISLLGSQAHTTPLRDPTQPPWRQILQDRTDTLVAENLIAKDLGADLVLKIQQNIVRNGKCNTRSCFAIDGSASVPPRAFEFQKDLVKLLAAFAALDDEAEFSAVQYGLSNIDISRETSNITEFLARVDGAVQVNASRTFVSAGIGSCLRRIRRGSIETAEGTVFVLGDGQANFGVEFLDEVLNEVQDETIVSVGFGRFDRELLEKIASSNED-VFLLGEYSNFEMIVYSLLLNVCTF 249
            +S  + +SL  S + T P RDP   PW+ +L+ RT  L  +N +AK+LG  LVLKIQQNIVR+GKC++RSCFAIDGSAS+ P AF+FQKDLVKLLA+FAALDDEAEFSAVQYGL+N  IS ETSNITEFL  ++ A Q NASRTF+ AGI +C+RRIRRG  E+A+GT+FVLGDGQANF + FLDEVL EV+DE +V+VGFG  +R LLE IA +++D VFLL  Y++F +I+YSLLLN+C+F
Sbjct:    7 ISFILLLSL--SLSTTVPQRDPLTEPWKSLLEARTQALTEDNTVAKELGESLVLKIQQNIVRHGKCDSRSCFAIDGSASISPSAFQFQKDLVKLLASFAALDDEAEFSAVQYGLANRPISLETSNITEFLTSLETAKQANASRTFIGAGIATCIRRIRRGEAESAKGTIFVLGDGQANFALGFLDEVLAEVKDERLVAVGFGNVNRSLLETIAGTDQDSVFLLPSYADFHIIIYSLLLNICSF 247
[Close]
BLAST of Gvermi12684.t1 vs. uniprot
Match: A0A2V3IS99_9FLOR (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS99_9FLOR)

HSP 1 Score: 200 bits (508), Expect = 3.840e-60
Identity = 118/235 (50.21%), Postives = 156/235 (66.38%), Query Frame = 0 
Query:   18 GSQAHTTPLRDPTQPPWRQILQDRTDTLVAENLIAKDLGADLVLKIQQNIVRNGKCNTRSCFAIDGSASVPPRAFEFQKDLVKLLAAFAALDDEAEFSAVQYGLSNIDISRETSNITEFLARVDGAVQVNASRTFVSAGIGSCLRRIRRGSIETAEGTVFVLGDGQANFGVEFLDEVLNEVQDETIVSVGFGRF-DRELLEKIAS-SNEDVFLLGEYSNFEMIVYSLLLN-VCTF 249
            GS+A      D   P  +Q+L+ RT  L+  N +AK +G   V  +Q+ ++  G CN   CFA+DGSAS+P   FEFQ+ L+ LLA+FAA+D E+EFSAVQYGL+   IS  TSNIT FL RV  + QVNASRTF+SAG+ SCLR++RRG+ ET+ G + VLGDG+ANF  + LD+VL EV DE +VSVG G F +  LL+K++    E VFL   YS+      S LL+ +C F
Sbjct:   23 GSEAQA----DVNNPEVQQLLEARTQVLLDTNQVAKRIGRTSVFNLQREVLVRGFCNRPLCFALDGSASIPAADFEFQRGLISLLASFAAIDTESEFSAVQYGLATTGISLPTSNITLFLQRVSLSRQVNASRTFISAGLASCLRQVRRGN-ETS-GIIVVLGDGRANFATDSLDQVLQEVDDELVVSVGVGTFLNPNLLKKLSRWVPERVFLFDSYSDINAKAVSALLSRICWF 251
The following BLAST results are available for this feature:
BLAST of Gvermi12684.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IQR0_9FLOR3.570e-10264.20VWFA domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IS99_9FLOR3.840e-6050.21VWFA domain-containing protein n=1 Tax=Gracilariop... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002035von Willebrand factor, type ASMARTSM00327VWA_4coord: 74..247
e-value: 4.3E-6
score: 36.3
IPR002035von Willebrand factor, type APFAMPF00092VWAcoord: 79..232
e-value: 6.0E-9
score: 36.4
IPR002035von Willebrand factor, type APROSITEPS50234VWFAcoord: 76..243
score: 11.098169
IPR036465von Willebrand factor A-like domain superfamilyGENE3D3.40.50.410von Willebrand factor, type A domaincoord: 74..249
e-value: 8.0E-16
score: 60.3
IPR036465von Willebrand factor A-like domain superfamilySUPERFAMILY53300vWA-likecoord: 75..239
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..250
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..21
NoneNo IPR availableCDDcd00198vWFAcoord: 78..221
e-value: 1.80725E-9
score: 53.3386

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:823153..823905 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12684.t1Gvermi12684.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 823153..823905 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12684.t1 ID=Gvermi12684.t1|Name=Gvermi12684.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=251bp
MSFSTVIVSLFVAISLLGSQAHTTPLRDPTQPPWRQILQDRTDTLVAENL
IAKDLGADLVLKIQQNIVRNGKCNTRSCFAIDGSASVPPRAFEFQKDLVK
LLAAFAALDDEAEFSAVQYGLSNIDISRETSNITEFLARVDGAVQVNASR
TFVSAGIGSCLRRIRRGSIETAEGTVFVLGDGQANFGVEFLDEVLNEVQD
ETIVSVGFGRFDRELLEKIASSNEDVFLLGEYSNFEMIVYSLLLNVCTFG
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002035VWF_A
IPR036465vWFA_dom_sf