Gvermi12683.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi12683.t1 vs. uniprot
Match: A0A2V3IQR5_9FLOR (Collagen alpha-5(VI) chain n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQR5_9FLOR) HSP 1 Score: 270 bits (689), Expect = 4.750e-88 Identity = 141/243 (58.02%), Postives = 174/243 (71.60%), Query Frame = 0
Query: 4 LFTILCASLFFTLVFATVSTDSATRRVDEVDTPLTEGAPQQAEVQAAIDIVTATNCNPNICFAVDGSGSMNDAEFKLELDFVKLVAAVISLDPESKFAGIQYGLRPRFISMLTDNAGQFLLDVDKTVHMKAPRTFIAPGIAGCWRQLMRVPNQPWKIVILGDGDSNFDALAPPLDPATIAQNFLANPNATISAVGVGDYQVASMLEGIAGSADRVFTADEWMNVIFVLADLVADVCGVSAVEF 246
LF LCA+ FATV+T SA RR+DE+DTPLT+G +AEVQ A+ I T C+PNICFAVDGSGSM+ EF+LE DF LVAAV++ D +++FA +QYGLRP+FIS LT++A FL V T + APRTFIAPG+AGC RQ + +P IV+LGDG SNFD+ PPLDP +IAQ FLANPN TISAVGVG +ML IAG + VF +W+ V VLA+LV +VCG+ AVEF
Sbjct: 7 LFFALCAA-----AFATVTTTSADRRIDELDTPLTKGTANEAEVQLALQIAEKTRCDPNICFAVDGSGSMDVTEFQLEKDFTNLVAAVVAYDEQARFAAVQYGLRPKFISRLTEDADAFLEAVHYTESLNAPRTFIAPGLAGCIRQFYYLKGEPKHIVLLGDGRSNFDSKLPPLDPVSIAQAFLANPNNTISAVGVGFDADDTMLTNIAGGEENVFNVGQWLEVTTVLAELVGEVCGLDAVEF 244
BLAST of Gvermi12683.t1 vs. uniprot
Match: A0A2V3ISA4_9FLOR (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISA4_9FLOR) HSP 1 Score: 239 bits (609), Expect = 5.680e-76 Identity = 124/244 (50.82%), Postives = 165/244 (67.62%), Query Frame = 0
Query: 3 RLFTILCASLFFTLVFATVSTDSATRRVDEVDTPLTEGAPQQAEVQAAIDIVTATNCNPNICFAVDGSGSMNDAEFKLELDFVKLVAAVISLDPESKFAGIQYGLRPRFISMLTDNAGQFLLDVDKTVHMKAPRTFIAPGIAGCWRQLMRVPNQPWKIVILGDGDSNFDALAPPLDPATIAQNFLANPNATISAVGVGDYQVASMLEGIAGSADRVFTADEWMNVIFVLADLVADVCGVSAVEF 246
R F + CA FF + FA V R++ +++PLT GA +A++ A++IV T C PN+CFA+DGS S+ D EF+L+LDFV L+ ++SLD +S ++ IQYGLRP+F+S T +A FLL V+ T +++ RTFIAPGI GC RQ RV Q KI++LGDG S FD+ PPLDP +IA FLA PN +I AVGV + +LE I G DRVF+ +WM+V+ VLADLV VCG AVEF
Sbjct: 4 RTFFLCCA--FFAVCFAVVPE----ARIEALNSPLTTGAANRAQIDRALEIVEETGCEPNLCFAIDGSSSITDDEFQLQLDFVALITGLVSLDEQSGYSAIQYGLRPKFMSRFTQDAAAFLLKVEGTRQLRSVRTFIAPGIGGCMRQFRRVRGQANKIILLGDGRSTFDSRDPPLDPPSIAAQFLAEPNNSICAVGVS-FDTTELLEEITGDPDRVFSVADWMSVVDVLADLVEQVCGADAVEF 240
BLAST of Gvermi12683.t1 vs. uniprot
Match: A0A2V3IPP3_9FLOR (Collagen alpha-6(VI) chain n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPP3_9FLOR) HSP 1 Score: 190 bits (483), Expect = 7.070e-57 Identity = 102/222 (45.95%), Postives = 140/222 (63.06%), Query Frame = 0
Query: 22 STDSATRRVDEVDTPLTEGAPQQAEVQAAIDIVTATNCNPNICFAVDGSGSMNDAEFKLELDFVKLVAAVISLDPESKFAGIQYGLRPRFISMLTDNAGQFLLDVDKTVHMKAPRTFIAPGIAGCWRQLMRVPNQPWKIVILGDGDSNFDALAPPLDPATIAQNFLANPNATISAVGVGDYQVASMLEGIAGSADRVFTADEWMNVIFVLADLVADVCGVSA 243
S +A R V + ++ LT+ V+AA+D+V CN NICFAVDGSG M+ +FK++LDF+ LVA ++SLDP S++A +QYG R IS LT + FLL+V TV + RTF+A GI+ C RQL R KIV+LGDG S F PP DP +++Q FL++P+ I AVGV +++ SMLE I G A +VF +W +V+ L LV VCG +
Sbjct: 20 SYQTALRSVLDPNSLLTKSEENMKFVKAAMDVVRKKKCNLNICFAVDGSGYMHGKDFKMQLDFINLVAGIVSLDPTSRYAAVQYGRRSSVISRLTRDTKSFLLNVKGTVQQCSSRTFVARGISRCARQLRRAKRGAKKIVVLGDGRSRFQTYGPPRDPVSVSQAFLSDPSHGICAVGV-NFRDTSMLEQITGDASKVFMVSDWESVLDALDALVVQVCGAES 240
BLAST of Gvermi12683.t1 vs. uniprot
Match: A0A2V3ITK9_9FLOR (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITK9_9FLOR) HSP 1 Score: 189 bits (481), Expect = 2.900e-56 Identity = 103/223 (46.19%), Postives = 141/223 (63.23%), Query Frame = 0
Query: 24 DSATRRVDEVDTPLTEGAPQQAEVQAAIDIVTATNCNPNICFAVDGSGSMNDAEFKLELDFVKLVAAVISLDPESKFAGIQYGLRPRFISMLTDNAGQFLLDVDKTVHMKAPRTFIAPGIAGCWRQLMRVPNQPWKIVILGDGDSNFDALAPPLDPATIAQNFLANPNATISAVGVGDYQVASMLEGIAGSADRVFTADEWMNVIFVLADLVADVCGVSAVEF 246
++A +R++ +DTPLT + A V C+PN+CFA+DGS ++N F+L+ DFVKLVA VISLD +S+FA +QYGLR IS LT +A FLL VD + RTF+A GI GC +QL++ P + IV+LGDGD + + ++A+ FL +P+ ISAV VG + S LE I G+ +RVF DEW V+ V A+LV DVCG+ AVEF
Sbjct: 46 EAARKRLERIDTPLTRSPSAMMSLARAFGEVAGGGCDPNVCFALDGSRTINSTNFQLQKDFVKLVAGVISLDEQSQFAALQYGLRSDVISDLTLDAEDFLLKVDGAKKVGYRRTFVAFGIFGCIQQLLKTPFEANHIVLLGDGDDDILVRHSGFNAESVAKRFLFSPHNAISAVAVG-FSDTSHLERIVGNPNRVFEVDEWAEVVDVTAELVEDVCGLDAVEF 267
BLAST of Gvermi12683.t1 vs. uniprot
Match: R7Q3A9_CHOCR (VWFA domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q3A9_CHOCR) HSP 1 Score: 110 bits (274), Expect = 1.200e-25 Identity = 68/182 (37.36%), Postives = 105/182 (57.69%), Query Frame = 0
Query: 59 CNPNICFAVDGSGSMNDAEFKLELDFVKLVAAVISLDPESKFAGIQYGLRPRFISMLTDNAGQFLLDVDKTVHMKAPRTFIAPGIAGCWRQLMRVPN-QPWKIVILGDGDSNFDALAPPLDPATIAQNFLANPNATISAVGVGDYQVASMLEGIAGSADRVFTADEWMNVIFVLADLVADVC 239
CN +CFA+DGSGS++ +FK++ D VKL+A+V + + + F+ +QYGL IS T NA +F VD ++ +APRTFI G+ C L P + +I++LGDG SNF LA PL +T+ + ISAVG+G + + L I GS R+ + + ++ ++ LV +C
Sbjct: 65 CNMRLCFALDGSGSISPVQFKVQQDLVKLLASV-AREGGATFSAVQYGLSNTAISTPTGNAPKFRRAVDDSIFQRAPRTFIGSGLGFCISNLKTEPRGRGRRILLLGDGRSNFFTLALPLVLSTLN-------DIQISAVGIGFPRNSRTLLDITGSRSRLCAVNRYSDIRRIVFKLVRGLC 238
BLAST of Gvermi12683.t1 vs. uniprot
Match: UPI000C04B899 (agrin-like n=1 Tax=Stylophora pistillata TaxID=50429 RepID=UPI000C04B899) HSP 1 Score: 57.4 bits (137), Expect = 8.190e-6 Identity = 51/177 (28.81%), Postives = 77/177 (43.50%), Query Frame = 0
Query: 58 NCNPNICFAVDGSGSMNDAEFKLELDFVKLVAAVISLDPE-SKFAGIQYGLRPRFISMLTDNAGQ----FLLDVDKTVHMKAPRTFIAPGIAGCWRQLMRVPN-----QPWKIVILGDGDSNFDALAPPLDPATIAQNFLANPNATISAVGVGDYQVASMLEGIAGSADRVFTADEW 224
N ++ FA+DGS S++D E++L DFVK V S+ + + A +QY D+ + L +V+ ++ T I G+ +++ N K+ I N D +A D + A PN T AVGVGD V L IA S D VF +E+
Sbjct: 1116 NVKFDVGFAIDGSNSIDDNEYRLTKDFVKDVIKAFSISEDGTHVALLQYASIGTMEIYFNDDEYRDPDLLLKEVENVRALRGAATDIGDGLEVALKEMFSTKNGMRGNDVKKLFIFFTDGRNTDTVA---DLSVKANQIKNIPNMTSIAVGVGDIVVRDELLTIASSEDEVFELEEF 1289
BLAST of Gvermi12683.t1 vs. uniprot
Match: A0A2B4SE78_STYPI (Agrin n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4SE78_STYPI) HSP 1 Score: 57.4 bits (137), Expect = 8.960e-6 Identity = 51/177 (28.81%), Postives = 77/177 (43.50%), Query Frame = 0
Query: 58 NCNPNICFAVDGSGSMNDAEFKLELDFVKLVAAVISLDPE-SKFAGIQYGLRPRFISMLTDNAGQ----FLLDVDKTVHMKAPRTFIAPGIAGCWRQLMRVPN-----QPWKIVILGDGDSNFDALAPPLDPATIAQNFLANPNATISAVGVGDYQVASMLEGIAGSADRVFTADEW 224
N ++ FA+DGS S++D E++L DFVK V S+ + + A +QY D+ + L +V+ ++ T I G+ +++ N K+ I N D +A D + A PN T AVGVGD V L IA S D VF +E+
Sbjct: 4631 NVKFDVGFAIDGSNSIDDNEYRLTKDFVKDVIKAFSISEDGTHVALLQYASIGTMEIYFNDDEYRDPDLLLKEVENVRALRGAATDIGDGLEVALKEMFSTKNGMRGNDVKKLFIFFTDGRNTDTVA---DLSVKANQIKNIPNMTSIAVGVGDIVVRDELLTIASSEDEVFELEEF 4804 The following BLAST results are available for this feature:
BLAST of Gvermi12683.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 7
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi12683.t1 ID=Gvermi12683.t1|Name=Gvermi12683.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=247bpback to top |