Gvermi12679.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12679.t1
Unique NameGvermi12679.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length221
Homology
BLAST of Gvermi12679.t1 vs. uniprot
Match: A0A2V3J6U1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6U1_9FLOR)

HSP 1 Score: 293 bits (751), Expect = 3.070e-98
Identity = 144/221 (65.16%), Postives = 175/221 (79.19%), Query Frame = 0
Query:    1 MKSFYALCFLAMLVPTLAQHVSNHICQNRCNADRAQTVRECDLPVTRTLCEVKEC-DNGFSCSLPENSFMIPNIQLPLLEMIVEYTWSPEQRDLDTSTRFLNANVGFSCNPSTPFVEFGGDNTSNGGSEVVVIDVEQARQDGLWDANTSISCHAGWHASENQGPAQMKVSLRRKSDGAIAGGATLSTRILPGTQSGCSDHGVADVKITRGALHTRITLERA 220
            M+ ++    LA +VP LAQH SN +C NRCN DR  + RECD PVTR+LC V+EC DNG+SCS+P NSFMI N QL LLE ++EYTWSPEQRDLDTSTRFL+ NVGFSC+ +  +++FGGDNTS GG+EV VIDVE+ARQDG W+ +T+I  +AGW AS+NQG AQMKV LRRKSDG +A  A++S RI PGTQ  CS H VA VKI RG+LHTR+TLE+A
Sbjct:    1 MRCYFVFFLLASVVPILAQHASNDVCPNRCNTDRTLSDRECDHPVTRSLCAVEECEDNGYSCSMPGNSFMISNNQLSLLEFVIEYTWSPEQRDLDTSTRFLDGNVGFSCSSANDYLDFGGDNTSKGGTEVAVIDVEKARQDGKWEDSTAIISNAGWFASDNQGGAQMKVYLRRKSDGGLAEEASVSDRINPGTQRTCSPHNVATVKIIRGSLHTRVTLEKA 221          
BLAST of Gvermi12679.t1 vs. uniprot
Match: A0A2V3ICG8_9FLOR (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICG8_9FLOR)

HSP 1 Score: 241 bits (614), Expect = 1.210e-76
Identity = 119/183 (65.03%), Postives = 147/183 (80.33%), Query Frame = 0
Query:   39 RECDLPVTRTLCEVKECDN-GFSCSLPENSFMIPNIQLPLLEMIVEYTWSPEQRDLDTSTRFLNANVGFSCNPSTPFVEFGGDNTSNGGSEVVVIDVEQARQDGLWDANTSISCHAGWHASENQGPAQMKVSLRRKSDGAIAGGATLSTRILPGTQSGCSDHGVADVKITRGALHTRITLERA 220
            REC+ PVTR++C V+EC+N G+SCS+  NSFMI N QLPLLE ++EYTWSPEQRDLD STRFL+ NVGF C     +++FGGDNTSNG +EVVVIDVE+ARQD  W+ +T+I  +A W AS+NQG AQM+V LRRKSDG +A  A++S RI PGTQS CS H VA VKI RG++HTR+TLE+A
Sbjct:   94 RECNHPVTRSVCAVEECENNGYSCSMRGNSFMISNNQLPLLEFVIEYTWSPEQRDLDKSTRFLDGNVGFRCTGPNDYLDFGGDNTSNGETEVVVIDVEKARQDSKWEDSTAIISNARWFASDNQGGAQMRVYLRRKSDGGLAEEASVSDRINPGTQSNCSSHKVAAVKIIRGSMHTRVTLEKA 276          
BLAST of Gvermi12679.t1 vs. uniprot
Match: A0A2V3IDC2_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDC2_9FLOR)

HSP 1 Score: 207 bits (527), Expect = 3.970e-64
Identity = 107/223 (47.98%), Postives = 141/223 (63.23%), Query Frame = 0
Query:    4 FYALCFLAMLVPTLAQHVSNHICQNRCNADRAQTVRECDLPVTRTLCEVKECD------NGFSCSLPENSFMIPNIQLPLLEMIVEYTWSPEQRDLDTSTRFLNANVGFSCNPSTPFVEFGGDNTSNGGSEVVVIDVEQARQDGLWDANTSISCHAGWHASENQGPAQMKVSLRRKSDGAIAGGATLSTRILPGTQSGCSDHGVADVKITRGALHTRITLERA 220
            F+AL   A  + T+       +C NRCNA+R  + REC L VTR +C V+ C        GF C +P+NSF+I N  LP LE +VEY+WS  Q DLDTSTRFL+ANVGF C+P   ++ F GD+ S+GG E + IDV +A ++     +TS++  AGWH SEN+G A +KV LR+KSD A+  GA LS+ I PGTQ+GC+   V  V+I R   HTR  L  A
Sbjct:   12 FFALAATAFAIQTV------DMCPNRCNANRPMSQRECSLAVTRGVCAVESCSPPAYNRTGFICKMPQNSFIIANTNLPQLEFVVEYSWSSTQSDLDTSTRFLDANVGFRCSPDKDYIAFSGDDVSSGGKETITIDVMEAFEEYQLSGSTSVAAFAGWHGSENEGDATLKVFLRKKSDQALISGAVLSSTISPGTQNGCAATAVGTVQIIRAQHHTRFALVEA 228          
BLAST of Gvermi12679.t1 vs. uniprot
Match: A0A2V3J5L0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5L0_9FLOR)

HSP 1 Score: 205 bits (521), Expect = 2.840e-63
Identity = 108/223 (48.43%), Postives = 141/223 (63.23%), Query Frame = 0
Query:    4 FYALCFLAMLVPTLAQHVSNHICQNRCNADRAQTVRECDLPVTRTLCEVKECD------NGFSCSLPENSFMIPNIQLPLLEMIVEYTWSPEQRDLDTSTRFLNANVGFSCNPSTPFVEFGGDNTSNGGSEVVVIDVEQARQDGLWDANTSISCHAGWHASENQGPAQMKVSLRRKSDGAIAGGATLSTRILPGTQSGCSDHGVADVKITRGALHTRITLERA 220
            F+AL   A  + T+       +C NRCN +RA + REC + VTR +C V  C        GF C +P NSF+IPN  LPLLE +VEY+WS  Q DLDTSTRFL+ANVG+SC+P   +V F GD+ S GG E + IDV +A ++     +TS++  AGWH +E++G A +KV LR+KSD A+  GA LS+ I PGTQ GC+   V  V+I R   HTR TL  A
Sbjct:    8 FFALAATAFAIQTV------DMCPNRCNTNRAMSQRECSVAVTRGVCSVDSCSPPAYNQTGFICRMPRNSFIIPNTNLPLLEFVVEYSWSSSQSDLDTSTRFLDANVGYSCSPDKNYVAFSGDDVSYGGKESITIDVLEAFEEYQLSGSTSVATFAGWHGNEDEGDATLKVFLRKKSDLALIPGAVLSSTINPGTQYGCAATAVGTVQIVRAQHHTRFTLVEA 224          
BLAST of Gvermi12679.t1 vs. uniprot
Match: A0A2V3IS11_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS11_9FLOR)

HSP 1 Score: 186 bits (473), Expect = 5.350e-56
Identity = 101/225 (44.89%), Postives = 133/225 (59.11%), Query Frame = 0
Query:    1 MKSFYALCFLAMLVPTLAQHVSNH-ICQNRCNADRAQTVRECDLPVTRTLCEVKEC------DNGFSCSLPENSFMIPNIQLPLLEMIVEYTWSPEQRDLDTSTRFLNANVGFSCNPSTPFVEFGGDNTSNGGSEVVVIDVEQARQDGLWDANTSISCHAGWHASENQGPAQMKVSLRRKSDGAIAGGATLSTRILPGTQSGCSDHGVADVKITRGALHTRITLE 218
            M +F  LCF  +++    +      IC N+C  +    +REC       LC V+ C      DNGFSCSLPE SF++ N +L   EM++ Y W   +RDLDTSTRFL ANVGF C  ++ ++ + GD++ NGG E VV+D ++AR+DGLW   TSI  HAGWH S+ QG A + V +RR  +     G  L   I PGTQ  CS H VA VKI RG   TR+TL+
Sbjct:    1 MYNFILLCFFVLIICVFTEDPPVFDICPNQCYKNSRMPIRECRRSNLAHLCSVRRCSYSGQEDNGFSCSLPERSFLLKNSELWQWEMVITYWWESGKRDLDTSTRFLGANVGFKCGKNSKYLRWLGDSSKNGGDEQVVVDFDKARRDGLWTGRTSIQLHAGWHGSQQQGMAHVVVGMRRTDNHEE--GNNLYAFIYPGTQRTCSPHQVAAVKIFRGRHFTRVTLD 223          
The following BLAST results are available for this feature:
BLAST of Gvermi12679.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3J6U1_9FLOR3.070e-9865.16Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ICG8_9FLOR1.210e-7665.03Uncharacterized protein n=3 Tax=Gracilariopsis cho... [more]
A0A2V3IDC2_9FLOR3.970e-6447.98Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3J5L0_9FLOR2.840e-6348.43Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IS11_9FLOR5.350e-5644.89Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..220
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..18

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:655439..656101 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12679.t1Gvermi12679.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 655439..656101 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12679.t1 ID=Gvermi12679.t1|Name=Gvermi12679.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=221bp
MKSFYALCFLAMLVPTLAQHVSNHICQNRCNADRAQTVRECDLPVTRTLC
EVKECDNGFSCSLPENSFMIPNIQLPLLEMIVEYTWSPEQRDLDTSTRFL
NANVGFSCNPSTPFVEFGGDNTSNGGSEVVVIDVEQARQDGLWDANTSIS
CHAGWHASENQGPAQMKVSLRRKSDGAIAGGATLSTRILPGTQSGCSDHG
VADVKITRGALHTRITLERA*
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