Gvermi12671.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12671.t1
Unique NameGvermi12671.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length533
Homology
BLAST of Gvermi12671.t1 vs. uniprot
Match: A0A2V3IQS5_9FLOR (Oxygen-dependent choline dehydrogenase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQS5_9FLOR)

HSP 1 Score: 739 bits (1908), Expect = 4.230e-264
Identity = 360/521 (69.10%), Postives = 432/521 (82.92%), Query Frame = 0
Query:   11 FVLLAFFCHAFADDFTDFLIVGGGTSGCILAARLCTAFPNLHTTLLERGLPRSAQSDFLVEAPRNLYQTWSDRSITEFFESLPDDGIGGRVTPTLTGTTLGGSSAINGMQWTVPTAGSVESWQIQGLDTATASAYFRRAYDAVGFAPPQSPLRYADDYVSAAMRAGFMPSDDPIVQPPVSAWQNRLAIDSEFRRNDACTAYLSPVRNAACSQNLRVLEGATADKILIENVAGGGKRATAVDTISTSDRVSRNRVRARKRIILSAGPYGSPTLLQRSGVGSTATLASAGVSQVVDLPVGERSTTRASVGVSSTFSGVPDEPANDAQAVASSLQRTIWESGNGGLLGTPVTAANGRTGDDGYFTATLVPFFPGSPEVRTGCYHNTNQTGYIRIRDSNPFNTPLLKNNLLSDPSDVGRLVRCLQKVVQIHQSFPTLFRMSLTAPANGVIDEQYVRQNANTGAHIVGGCAVGDVLTDELQVKGVDRLMVVDASAIPQMPRSAGPAASVYMLAEFMADKIIAEQGG 531
            F+LLA  C   A  FTDFL+VGGGTSGCI+AARLC+AFPNLH TLLERGLPRS QS+FLV APRNL+ +WSDRSITEFFESLPD G+ GR TPTLTG TLGGSSAINGMQWTVP +GSVE W I+GL T TA+ Y+RRAYD VGF PPQ+PL+YADDYV+AA+ AGF  SDDPI QP  S WQNRLA+D+ FRRNDAC+AY+SP  +++C++NL V++G TA KI++ +++GGGK A AVDTIS+SDR + +R  AR+ +++++GPYGSP LLQ SG+GS +TLA+AGV Q ++LPVGERS TRAS GV ST++GVPDEPAN+ +AV S+ QR IW+SGNGGLLGTPVTAANGR G+DGYFT   +PFFPG PE+RTGCYHNTN TG++RIRDSNPF+TPLL NNLLSD  DV RLVRCL    +IH+ FP  F+M+  +PA GV    YV++ ANTGAHIVGGC VGDVLTDEL+VKGV+ L VVDAS+I  MP+SAGPAASVYMLAE+MAD+II +  G
Sbjct:   15 FLLLAERC-VNAQSFTDFLVVGGGTSGCIMAARLCSAFPNLHVTLLERGLPRSPQSNFLVSAPRNLFNSWSDRSITEFFESLPDAGLQGRTTPTLTGITLGGSSAINGMQWTVPMSGSVEEWGIRGLSTETAAPYYRRAYDTVGFGPPQAPLQYADDYVTAALSAGFSSSDDPISQPARSVWQNRLALDANFRRNDACSAYVSPALSSSCARNLAVVQGVTATKIVMSDLSGGGKVAVAVDTISSSDRSTVHRYWARREVLITSGPYGSPKLLQLSGIGSASTLAAAGVVQTLNLPVGERSVTRASAGVESTYTGVPDEPANNVEAVNSAQQREIWDSGNGGLLGTPVTAANGRAGEDGYFTVGFIPFFPGRPELRTGCYHNTNSTGFVRIRDSNPFSTPLLNNNLLSDSEDVQRLVRCLNAAAEIHRKFPASFQMTFRSPAGGVATADYVKRTANTGAHIVGGCPVGDVLTDELRVKGVESLRVVDASSIRTMPKSAGPAASVYMLAEYMADRIIEDHSG 534          
BLAST of Gvermi12671.t1 vs. uniprot
Match: A0A2V3IQR9_9FLOR (Oxygen-dependent choline dehydrogenase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQR9_9FLOR)

HSP 1 Score: 584 bits (1506), Expect = 5.120e-203
Identity = 300/539 (55.66%), Postives = 375/539 (69.57%), Query Frame = 0
Query:    1 MSAFRLVYHTFVLLAFFCHAFADDFTDFLIVGGGTSGCILAARLCTAFPNLHTTLLERGLPRSAQSDFLVEAPRNLYQTWSDRSITEFFESLPDDGIGGRVTPTLTGTTLGGSSAINGMQWTVPTAGSVESWQIQGLDTATASAYFRRAYDAVGFAPPQSPLRYADDYVSAAMRAGFMPSDDPIVQPPV-SAWQNRLAIDSEFRRNDACTAYLSPVRNAACSQNLRVLEGATADKILI-----ENVAGGGKRATAVDTISTSDRVSR-NRVRARKRIILSAGPYGSPTLLQRSGVGSTATLASAGVSQVVDLPVGERSTTRASVGVSSTFSGVPDEPANDAQAVASSLQRTIWESGNGGLLGTPVTAANGRTGDDGYFTATLVPFFPGSPEVRTGCYHNTNQTGYIRIRDSNPFNTPLLKNNLLSDPSDVGRLVRCLQKVVQIHQSFPTLFRMSLTAPANGVIDEQYVRQNANTGAHIVGGCAVGDVLTDELQVKGVDRLMVVDASAIPQMPRSAGPAASVYMLAEFMADKIIAEQGGV 532
            M AF L   T  L+    H     FTDFLIVGGGT+GC+LA++LC AFPN H T+LERGLPRS QSDFLV APR L+    DRS+ E   SLPD GI GR T  LTG TLGGS+ INGMQWT+P  G++E W +  L TA+A  YFRR Y+ VGF PPQ+PL+YADDYVSA ++AGF  +++P     + S WQ RL+IDS FRRNDA +AYL P+ + +C++N+ V++GATA KI+       N      RAT VDT+ +     +  R  AR+ ++++AGPY SP LLQ SGVG+ A L +AGV+QV++LPVGE +  RAS  + ST+SGVPDE AN+   V S   R  WE+G GG+L TPV+AANGR G D YF  T+VPF PG PE+R+ CYHNT  TGY+RIRDSNPF+ PLLKNN LS  +DV RL RCL+ +  +H+ FP  F+M    P NGV+ E YVR  A  GAH VGGCA+GDV+T E +VKG   L V+DAS+IP MP SAGP ASVY+LAE M D+++ E  GV
Sbjct:    1 MQAFYLALITSALI----HLTCAQFTDFLIVGGGTAGCVLASKLCVAFPNAHITILERGLPRSPQSDFLVHAPRKLFDVLGDRSVGEAITSLPDAGINGRTTVALTGATLGGSTTINGMQWTLPLPGTIEQWGVPNLTTASADPYFRRIYNKVGFGPPQNPLQYADDYVSAGVQAGFELNNNPFDTSTLRSIWQTRLSIDSNFRRNDAYSAYLRPLLDNSCAKNVAVVQGATASKIVFTQSTDSNTGATTVRATGVDTVPSPGSTHKAQRYWARREVLVTAGPYNSPKLLQLSGVGTRAVLDAAGVAQVLELPVGEATVGRASGTIPSTYSGVPDEAANNITLVNSPEARQQWEAGLGGILSTPVSAANGRAGTDAYFGCTIVPFVPGPPELRSACYHNTETTGYLRIRDSNPFSAPLLKNNFLSSQADVNRLKRCLENMADVHRQFPASFKMRFKYPPNGVVTEGYVRSVAQWGAHFVGGCAIGDVVTGEFKVKGCSGLRVIDASSIPTMPVSAGPMASVYLLAELMGDRLVEEYKGV 535          
BLAST of Gvermi12671.t1 vs. uniprot
Match: A0A2V3J0J7_9FLOR (Oxygen-dependent choline dehydrogenase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0J7_9FLOR)

HSP 1 Score: 548 bits (1412), Expect = 1.320e-188
Identity = 278/508 (54.72%), Postives = 362/508 (71.26%), Query Frame = 0
Query:   24 DFTDFLIVGGGTSGCILAARLCTAFPNLHTTLLERGLPRSAQSDFLVEAPRNLYQTWSDRSITEFFESLPDDGIGGRVTPTLTGTTLGGSSAINGMQWTVPTAGSVESWQIQGLDTATASAYFRRAYDAVGFAPPQSPLRYADDYVSAAMRAGFMPSDDPIVQPPVSAWQNRLAIDSEFRRNDACTAYLSPVRNAACSQNLRVLEGATADKILIENVAGGGKRATAVDTISTSDRVSRNRVR---ARKRIILSAGPYGSPTLLQRSGVGSTATLASAGVSQVVDLPVGERSTTRASVGVSSTFSGVPDEPANDAQAVASSLQRTIWESGNGGLLGTPVTAANGRTGDDGYFTATLVPFFPGSPEVRTGCYHNTNQTGYIRIRDSNPFNTPLLKNNLLSDPSDVGRLVRCLQKVVQIHQSFPTLFRMSLTAPANGVIDEQYVRQNANTGAHIVGGCAVGDVLTDELQVKGVDRLMVVDASAIPQMPRSAGPAASVYMLAEFMADKIIAE 528
             F+DF++VG GT+GC LAA+LC+A PN H TLLERG PRS +S+FLVEAPRNL+  WSDR++T+ + S PD+GI  R T  L GTT GGSSAINGMQWTVP  GSVE W+I GL T +AS++++RAY  V F  P+ PL+YADDY+ AA+RAGF  S +P VQP  + WQNRLAID  FRR+D+C+AYL PV N+ C++NL+++   TA +IL E     G R  AV  + T D  S N  R   AR+ ++LSAGPY S  LLQ SGVG  + L +A +SQ+++LPVG+   +RAS  V+S ++GV DEPAN+   V S  +R  +E+G GG+L TPV+AANGR G DGYF A  VPFFPG  E RT C+HN      +     +PF+TP +K NLL++ ++VG+LV CLQ+V+ IH++ P  F  ++T P  GV+ E YVR+ ANTGAH VG CAV DV+  +L V  VD L VVDAS I +MP+SAGPAASVYM+AEFMA+++ +E
Sbjct:   32 QFSDFVVVGAGTAGCALAAKLCSALPNHHITLLERGAPRSDESEFLVEAPRNLFPLWSDRNVTQAYPSEPDEGIQNRSTTVLAGTTAGGSSAINGMQWTVPLPGSVEQWRINGLTTRSASSFYQRAYQTVEFDEPKFPLQYADDYIRAAVRAGFPQSTNPFVQPDRAVWQNRLAIDGTFRRSDSCSAYLKPVMNSVCARNLQLVLSQTASRILFERSGEDGGRLKAVG-VQTLDTFSPNITRSFYARRNVVLSAGPYESAHLLQLSGVGPKSVLDAANISQILELPVGQTCVSRASASVASRYTGVRDEPANNMTLVNSQAERDRFETGRGGILATPVSAANGRVGGDGYFGAGFVPFFPGPREFRTQCFHNGRTLASVTTVSDDPFDTPKVKLNLLANDNEVGQLVSCLQQVLDIHRALPPEFNATVTEPVGGVVTEAYVRETANTGAHFVGCCAVDDVVDGDLNVLRVDGLKVVDASVIREMPKSAGPAASVYMIAEFMAERMSSE 538          
BLAST of Gvermi12671.t1 vs. uniprot
Match: A0A2V3IGB8_9FLOR (Oxygen-dependent choline dehydrogenase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGB8_9FLOR)

HSP 1 Score: 512 bits (1318), Expect = 1.060e-174
Identity = 261/519 (50.29%), Postives = 349/519 (67.24%), Query Frame = 0
Query:   12 VLLAFFCHAFADDFTDFLIVGGGTSGCILAARLCTAFPNLHTTLLERGLPRSAQSDFLVEAPRNLYQTWSDRSITEFFESLPDDGIGGRVTPTLTGTTLGGSSAINGMQWTVPTAGSVESWQIQGLDTATASAYFRRAYDAVGFAPPQSPLRYADDYVSAAMRAGFMPSDDPIVQPPVSAWQNRLAIDSEFRRNDACTAYLSPVRNAACSQNLRVLEGATADKILIENVAGGGKRATAVDTISTSDRVSRNRV--RARKRIILSAGPYGSPTLLQRSGVGSTATLASAGVSQVVDLPVGERSTTRASVGVSSTFSGVPDEPANDAQAVASSLQRTIWESGNGGLLGTPVTAANGRTGDDGYFTATLVPFFPGSPEVRTGCYHNTNQTGYIRIRDSNPFNTPLLKNNLLSDPSDVGRLVRCLQKVVQIHQSFPTLFRMSLTAPANGVIDEQYVRQNANTGAHIVGGCAVGDVLTDELQVKGVDRLMVVDASAIPQMPRSAGPAASVYMLAEFMADKIIAE 528
            +LL F     A D +D LIVG GT+GC LAARLCTA PNL  TLLER  PRS  ++F V APR L+ TW    + E FESLP+  +  R    LTG TLGG+SAI G+QWTVP  GS+E+W I+GL T +A AYF RAYD +  + P SPL YA DY++AA+RAGF  S D +     S WQNRL IDS+FRR D+C+AY+ P+    C+ NLR+++  T  K+L+   +G   +A  V+ + TSDR     +  RAR+  IL+AGPYGSP +LQ SG+G    L  A VS ++DLPVG ++  R S  +SS ++GVP+EP+N+   V    QR  WE G   +L TPV+AANGR G DGYF ++ +P++PG PEVR+ C+ N    G+IRIRDSNPF+ P ++NNLL    D+ R+ RCL+ ++++H+SFP  F M+ T P  G + E ++R   NTGAH V GC VG+VLT+ L+V+GV+ L V+D+S++ +MP SAGP AS+ MLAE+MAD I  E
Sbjct:    8 LLLYFIAPVLAQD-SDILIVGAGTAGCPLAARLCTALPNLTITLLERASPRSPDAEFYVRAPRKLFSTWVSPELLETFESLPNPALN-RSHTVLTGATLGGTSAITGLQWTVPLPGSIENWGIEGLTTESARAYFERAYDQLSVSVPASPLLYASDYINAAVRAGFSRSADHLDSIERSVWQNRLTIDSQFRRTDSCSAYVLPLLGGRCAHNLRLIQNVTVSKLLLSR-SGPSLQAHGVEAMQTSDRNRTQSLTFRARRETILAAGPYGSPKILQLSGIGPQEVLKEANVSCLLDLPVGAKTVCRTSGSISSRYTGVPNEPSNNFSLVEDPEQRARWERGEPSVLRTPVSAANGRAGRDGYFGSSFIPYWPGIPEVRSFCHSNVESRGFIRIRDSNPFSPPFVQNNLLGTKQDMDRMDRCLRSLMRVHESFPKRFNMTFTKPEQGKLTEDWIRSTINTGAHFVSGCPVGEVLTERLEVRGVNGLRVIDSSSLREMPISAGPLASIVMLAEYMADTISKE 523          
BLAST of Gvermi12671.t1 vs. uniprot
Match: R7QGX9_CHOCR (GMC_OxRdtase_N domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGX9_CHOCR)

HSP 1 Score: 385 bits (988), Expect = 3.730e-123
Identity = 228/528 (43.18%), Postives = 315/528 (59.66%), Query Frame = 0
Query:   12 VLLAFFCHAFADDFTDFLIVGGGTSGCILAARLCTAFPNLHTTLLERGLPRSAQSDFLVEAPRNLYQTWSDRSITEFFESLPDDGIGGRVTPTLTGTTLGGSSAINGMQWTVPTAGSVESWQIQGLDTATASAYFRRAYDAVGFAPPQSPLR--YADDYVSAAMRAGFMPSDDPIVQPPVSA--WQNRLAIDSEFRRNDACTAYLSPVRNAACSQNLRVLEGATADKILIENVAGGGKRATAVD-TISTSD----RVSRNRVRARKRIILSAGPYGSPTLLQRSGVGSTATLASAGVSQVVDLPVGERSTTRASVGVSSTFSGVPDEPANDAQAVASSLQRTIWESGNGGLLGTPVTAANGRTGDDGYFTATLVPFFPGSPE---VRTGCYHNTNQT-GYIRIRDSNPFNTPL-LKNNLLSDPSDVGRLVRCLQKVVQIHQSFPTLFRMSLTAPANGVIDEQYVRQNANTGAHIVGGCAVGDVLTDELQVKGVDRLMVVDASAIPQMPRSAGPAASVYMLAEFMADKI 525
            V+  F   A A    D LI+G GTSGC LAARLC A P  + TLLER  PR++ +DFLV +PR ++  W   S+ E   +LP  G+ GR  P  TG TLGG+SAINGMQW VP  GSV++W I+ L T +A  Y++RA+  +GFA    PLR  + D ++ AA RAG+   +     P  +   ++NR+AID    R D+CTAYLSPV N  C+ NLR+++GA+  ++L+   +    RAT V+ T+S S     R  + RV A   +I++AGP+GSP LLQ SG+G    L  AG+   V LPVG  +  R    + S     P EP+N++  +  + QRT+W++G G +LG     ANGR   D Y T T   FFP   +   V T C  N   + G++R+   N  + PL ++  LL   +D  R+ RCL ++ ++H+  P  F      P++G I E+++R NA    H+VGGCAVG+VLTD L+VKGV  L VVD+S++  MP SAGP AS YMLAEFMA+ I
Sbjct:  130 VIALFVTLAGATTPPDLLIIGAGTSGCALAARLCVALPTRNITLLERASPRNSAADFLVRSPRQMWLAWQSSSVVEPIRTLPSSGLLGRAVPVFTGATLGGTSAINGMQWVVPRDGSVDTWGIRNLTTNSARRYYQRAFRTIGFAAQIPPLRQRHVDAFLGAARRAGYDTGNKDPFDPSEAFDFFENRMAIDLAGVRRDSCTAYLSPVLNTKCAHNLRLVQGASVTRLLLSRESR--PRATGVEYTVSGSSAGERRTRKLRVAAGGELIVTAGPFGSPKLLQLSGIGPRDVLQKAGIPVRVGLPVGTHTVARPFAALDSEIQA-PLEPSNNSTLLNDTAQRTLWDAGRGSVLGRSSFIANGRDRADAYLTGTG-SFFPALVDRSIVSTNCNSNVALSRGFVRVTTRNA-SAPLDVQMALLQKRADFLRMQRCLLRLRRLHEELPRRFTAKWANPSDGQITERWIRDNAGWAGHMVGGCAVGEVLTDGLRVKGVRGLRVVDSSSLRNMPESAGPMASTYMLAEFMAEVI 652          
BLAST of Gvermi12671.t1 vs. uniprot
Match: A0A2V3IL82_9FLOR (Pyranose dehydrogenase 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IL82_9FLOR)

HSP 1 Score: 379 bits (972), Expect = 1.350e-121
Identity = 223/512 (43.55%), Postives = 305/512 (59.57%), Query Frame = 0
Query:   26 TDFLIVGGGTSGCILAARLCTAFPNLHTTLLERGLPRSAQSDFLVEAPRNLYQTWSDRSITEFFESLPDDGIGGRVTPTLTGTTLGGSSAINGMQWTVPTAGSVESWQIQGLDTATASAYFRRAYDAVGFAP--PQSPLRYADDYVSAAMRAGFMPSDDPIVQPP-VSAWQNRLAIDSEFRRNDACTAYLSPVRNAACSQNLRVLEGATADKILIENVAGGGKRATAVDTISTSDRVSRNR--VRARKRIILSAGPYGSPTLLQRSGVGSTATLASAGVSQVVDLPVGERSTTRASVGVSSTFSGVPDEPANDAQAVASSLQRTIWESGNGGLLGTPVTAANGRTGDDGYFTATLVPFFPG------SPEVRTGCYHNTNQTGYIRIRDSNPFNTPLLKNNLLSDPSDVGRLVRCLQKVVQIHQSFPTLFRMSLTAPANGVIDEQYVRQNANTGAHIVGGCAVGDVLTDELQVKGVDRLMVVDASAIPQMPRSAGPAASVYMLAEFMADKII 526
            +DF+IVGGGTSGC+LAARLC AFP+   ++LERG P +  + F+ +A RN+   W D  I+E F SLP+DG+ GR     TG  LGGSS+ N +Q+ VP  G V S  I GL    A   +RR Y  VGF P  P   LRYADDY+ A   AGF   DDP      ++ W  R +ID   RR D+C AYL+      CS NLRV++G T  ++L     G   RAT V+ +S+ D+  ++R  + ARK ++LSAGPYGSP LLQ SG+G    L   G+  V DLPVG  + +RA+ G  S ++GVP EPAN++  + S+  R  WE+G GG+ G+     NG   D  Y T  L   F G       P + + C  N    GYI + DSNPF++PL++ +LL +  D+ R+ RCL+ V ++H+SFP  F+  LT  +    DE+ +R  A T  H VGGCAVG V+  +L+V+GV  L +VDAS +  +P SAGP ++ Y++AE  A  +I
Sbjct:   62 SDFIIVGGGTSGCVLAARLCVAFPDASISVLERGKPLNESARFVKDAMRNVIDAWVDPQISESFLSLPNDGLSGRRVLLTTGAVLGGSSSSNAVQFVVPLEGYVRSLGIAGLSPMRAKRLYRRVYRKVGFRPQPPLVKLRYADDYLEAGRNAGFEIEDDPFRNNARLAMWNTRSSIDGGGRRVDSCAAYLNENVRDRCSANLRVVQGVTVIRVLFSRT-GLSLRATGVEYVSSDDKQLQDRKVMLARKEVLLSAGPYGSPKLLQLSGIGPREVLDRVGLKTVRDLPVGVSTQSRAASGHFSAYTGVPLEPANNSTVLNSTDARQQWENGLGGVYGSSPFPMNGVVKDICYLTNVLA--FGGLLEGLDEPLLASFCLGNPTSRGYICLNDSNPFSSPLVQLDLLGNREDLLRIQRCLRLVQKVHRSFPPQFK--LTDLSQTSADEEEIRNTALTPFHYVGGCAVGSVVRSDLRVRGVYGLRIVDASVLRHIPTSAGPLSTTYVVAEHAAGDLI 568          
BLAST of Gvermi12671.t1 vs. uniprot
Match: A0A1X6NKG3_PORUM (GMC_OxRdtase_N domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NKG3_PORUM)

HSP 1 Score: 378 bits (970), Expect = 1.770e-120
Identity = 230/520 (44.23%), Postives = 304/520 (58.46%), Query Frame = 0
Query:   34 GTSGCILAARLCTAFPNLHTTLLERGLPRSAQSDFLVEAPRNLYQTWSDRSITEFFESLPDDGIGGRVTPTLTGTTLGGSSAINGMQWTVPTAGSVESWQIQGLDTATASAYFRRAYDAVGFAPPQSPLR--YADDYVSAAMRAGFMPSDD--PIVQPPVSAWQNRLAIDSEFRRNDACTAYLSPVRNAACSQNLRVLEGATADKILIENVAG---GGKR----ATAVDTISTSDRVS-----RNRVRARKRIILSAGPYGSPTLLQRSGVGSTATLASAGVSQVVDLP-VGERSTTRASVGVSSTFSGVPDEPANDAQAVASSLQRTIWESGNGGLLGTPVTAANGRTGDD--GYFTATLVPF--FPGSPEVRTGCYHNTNQTGYIRIRDSNPFNTPLLKNNLLSD-PSDVGRLVRCLQKVVQIHQSFPTLFRM-SLTAPANGVIDEQYVRQNANTGAHIVGGCAVGDVLTDELQVKGVDRLMVVDASAIPQMPRSAGPAASVYMLAEFMADKIIAEQG 530
            GT+GC LAARLCTA P     LLERG PR+   +FLV A R    TW + +++E   S P  G+GGR    L GTTLGGSSAIN  QWT P A  V +W + GL  +TA AY+ RA  A+G A P  PLR  Y +++V AA  AG    D+  P   P   AW +R+A+D   RR DAC  Y++P    AC+ NL +++G T  K+L+E   G   GG R    A  V  ++++DR +        +RAR+ +I +AGPYGSP LL  SG+G  A L +AGV+  V LP VG R  TR     ++T+SGVP  PAN+A  +A       W +G GG+LG    AA GR  D    Y  A   P+   PG  E  + C  N + TG + +  ++PF  P+++ NLL    ++V  +V CL+++  I +SFP  + M  +  PA+  IDE  VR    +G H+VGGCAVG VL   L+V+GV RL VVDASAIP M  SAGP ASVYMLAE+ AD++ A  G
Sbjct:  136 GTAGCTLAARLCTALPRARVVLLERGAPRNGTEEFLVRAARLTTATWPEPTLSEIILSAPARGLGGRTVRLLAGTTLGGSSAINFGQWTTPPAAEVAAWGVTGLTASTAGAYYARAAAALGVAVPPPPLRQVYTEEWVDAAGAAGLPRVDEAAPGPTPRRGAWIHRIAVDPAGRRVDACAGYVAPALAGACADNLELVQGVTVTKVLLETRRGRRHGGGRHQPVAVGVQYVASADRAAGRAAATTTLRARRAVISAAGPYGSPKLLLLSGIGPPAALRAAGVTPTVTLPAVGARMQTRPFAQATATYSGVPLAPANNATLLADPATVEQWRAGRGGVLGVAAAAALGRQTDGLGTYIEAMFTPWRSAPGRREYVSTCLSNPSATGRLTLDGADPFAQPVVQTNLLGGGAAEVSTVVACLRRLRAITRSFPPAWGMREVEPPASRRIDEALVRATTVSGQHMVGGCAVGAVLDGRLRVRGVARLHVVDASAIPSMTSSAGPMASVYMLAEWAADRLAARYG 655          
BLAST of Gvermi12671.t1 vs. uniprot
Match: A0A515J4W6_NEOYE (Choline dehydrogenase n=1 Tax=Neopyropia yezoensis TaxID=2788 RepID=A0A515J4W6_NEOYE)

HSP 1 Score: 375 bits (962), Expect = 1.850e-120
Identity = 223/516 (43.22%), Postives = 296/516 (57.36%), Query Frame = 0
Query:   36 SGCILAARLCTAFPNLHTTLLERGLPRSAQSDFLVEAPRNLYQTWSDRSITEFFESLPDDGIGGRVTPTLTGTTLGGSSAINGMQWTVPTAGSVESWQIQGLDTATASAYFRRAYDAVGFAPPQSPLR--YADDYVSAAMRAGFMPSDDPIVQPPVS--AWQNRLAIDSEFRRNDACTAYLSPVRNAACSQNLRVLEGATADKILIENVAGG----------------GKRATAVDTISTSDR-VSRNR-VRARKRIILSAGPYGSPTLLQRSGVGSTATLASAGVSQVVDLPVGERSTTRASVGVSSTFSGVPDEPANDAQAVASSLQRTIWESGNGGLLGTPVTAANGRTGDD--GYFTATLVP-FFPGSPEVRTGCYHNTNQTGYIRIRDSNPFNTPLLKNNLLSDPSDVGRLVRCLQKVVQIHQSFPTLFRMSLTAPANGVIDEQYVRQNANTGAHIVGGCAVGDVLTDELQVKGVDRLMVVDASAIPQMPRSAGPAASVYMLAEFMADKII 526
            +GC LAARLC A P     LLERG  R+A  +FLV +PR     W+  S+ E F S P+  +G R     TG TLGG SA+N  QW+VP AG+V+ W I GL    A  YFRRA   +  A P+  LR  Y DD+++AA RAG +PS D  V PP +  +W +RL +D   RR DACTAY++P     C+ NLRV +G T  K+L E+  G                 G R   V  ++++D    R R +RAR+ +I +AG  GSP LLQ SG+G    L  AGV+  VDLPVGER  TR  +GV S ++GVP    N+A  VA+   R  WE+G GG+LG    A   R  D   GY TA+  P   PG P     C  N + TG + + D++PF+ P+++   L +  +V  L+ CL+++  +  +FP  FRM  T P  G +DE YVR ++    H+VGGC VG V+    +VKG   L VVD+SAIP +P SAG  ASVYMLAEF A+K+I
Sbjct:   47 AGCALAARLCAALPARRVVLLERGGRRNATEEFLVRSPRQAVAAWAVPSLLETFPSAPERALGRRRVQLATGATLGGGSAVNIGQWSVPLAGTVDGWGIPGLGDTAARRYFRRAARQLRVAVPRGGLRQAYVDDWLAAAARAG-VPSVDDTVWPPPNRGSWVHRLTVDRAGRRRDACTAYVAPALKGVCAANLRVHQGVTVTKVLWEDDDGARAAGPTTAADGRRRRRGTRVAGVAYVASADGDAGRVRTLRARQAVISAAGAVGSPKLLQLSGIGRRRALRRAGVTPRVDLPVGERFQTRPFLGVVSEYAGVPLAAGNNASVVAAPATRRRWEAGRGGVLGVAAHAGLLRVPDGAGGYVTASFTPDAVPGEPVFGAYCMTNPSSTGRLTLADASPFSAPVVETRSLGEGHEVATLLACLRRMAAVAAAFPPAFRMRQTVPRRGRLDEAYVRASSEVSGHLVGGCQVGAVVDGGFRVKGFRNLYVVDSSAIPSIPLSAGTMASVYMLAEFAAEKLI 561          
BLAST of Gvermi12671.t1 vs. uniprot
Match: A0A515J4J7_NEOYE (Choline dehydrogenase n=1 Tax=Neopyropia yezoensis TaxID=2788 RepID=A0A515J4J7_NEOYE)

HSP 1 Score: 362 bits (928), Expect = 2.480e-115
Identity = 223/521 (42.80%), Postives = 298/521 (57.20%), Query Frame = 0
Query:   30 IVGGGTSGCILAARLCTAFPNLHTTLLERGLPRSAQSDFLVEAPRNLYQTWSDRSITEFFESLPDDGIGGRVTPTLTGTTLGGSSAINGMQWTVPTAGSVESWQIQGLDTATASAYFRRAYDAVGFAPPQSPL--RYADDYVSAAMRAGFMP-SDDPIVQPPVSAWQNRLAIDSEFRRNDACTAYLSPVRNAACSQNLRVLEGATADKILIEN-----------VAGGGKRATAVDTISTSDR-VSRNRVR---ARKRIILSAGPYGSPTLLQRSGVGSTATLASAGVSQVVDLPVGERSTTRASVGVSSTFSGVPDEPA--NDAQAVASSLQRTIWESGNGGLLGTPVTAANGRT--GDDGYFTATL-VPFFPGSPEVRTGCYHNTNQTGYIRIRDSNPFNTPLLKNNLLSD-PSDVGRLVRCLQKVVQIHQSFPTLFRMSLTAPANG-VIDEQYVRQNANTGAHIVGGCAVGDVLTDELQVKGVDRLMVVDASAIPQMPRSAGPAASVYMLAEFMADKI 525
            +VGGGT+GC LAARLC A P+    LLERG PR+   +FLV +PR    +W+  S+ E F +  +  +GGR    + G +LGG SA+N  QWTVP  G+V  W + GLD A A  ++RRA   VG A P+  L  +YADD+++AA RAG    S+    QP   AW +RL +D+  RR DAC+AY++P    AC+ NLRV++G    K+L ++            AGG +R T V  + ++DR  +R RVR   AR  +I +AG  GSP LLQRSG               VDLPVGE+  TR  VGV+ +++G     A  N+   VAS+  R  WE+G GG+LG    A  GR   GD GY +AT  V   PG    RT C  NT  +G + + D +PF  P +  NLL    ++V  ++ CL++V  +  +F   F M  T P  G  +DE YVR  A + AH VGG  VG VL   L+V+G   L VVD+SAIP +P SAG  ASVYMLAE MA ++
Sbjct:   43 LVGGGTAGCALAARLCAALPSRRVVLLERGPPRNGTEEFLVRSPRQALASWALPSLLEAFPTAAEPSLGGRRIRLMVGASLGGGSAVNIGQWTVPLDGTVGRWGVDGLDEAAARRHYRRAARQVGVAVPRRGLWQQYADDWLAAAERAGLPSVSEAGWPQPDRGAWVHRLTVDAAGRRRDACSAYVTPALGGACAHNLRVVQGVAVTKVLWDDDRAAGGAPRRPAAGGRRRVTGVAYVMSTDRDAARPRVRSLRARLAVISTAGAVGSPALLQRSGXXXXXXXXXXXXXPRVDLPVGEQFATRPLVGVTHSYAGGTARLAVENNGSVVASAAARRAWEAGRGGVLGVAAFAGLGRVPDGDGGYVSATFTVDPAPGDRRFRTYCMTNTASSGQLAVVDGSPFTPPTVITNLLGGGAAEVTTMLSCLRRVAAVGDAFAPRFAMRQTEPEPGRPLDEAYVRDLAGSSAHFVGGAPVGAVLDGRLRVRGFHNLYVVDSSAIPSIPPSAGTMASVYMLAEHMAGRL 563          
BLAST of Gvermi12671.t1 vs. uniprot
Match: A0A1X6PK05_PORUM (GMC_OxRdtase_N domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PK05_PORUM)

HSP 1 Score: 357 bits (917), Expect = 8.680e-114
Identity = 220/520 (42.31%), Postives = 293/520 (56.35%), Query Frame = 0
Query:   32 GGGTSGCILAARLCTAFPNLHTTLLERGLPRSAQSDFLVEAPRNLYQTWSDRSITEFFESLPDDGIGGRVTPTLTGTTLGGSSAINGMQWTVPTAGSVESWQIQGLDTATASAYFRRAYDAVGFAPPQSPLRYA--DDYVSAAMRAGFMPSDDPIVQPPV-SAWQNRLAIDSEFRRNDACTAYLSPVRNAACSQNLRVLEGATADKILIENV---AGGGK------RATAVDTISTSDR-VSRNR-VRARKRIILSAGPYGSPTLLQRSGVGSTATLASAGVSQVVDLPVGERSTTRASVGVSSTFSGVPDEPANDAQAVASSLQRTIWESGNGGLLGTPVTAANGR--TGDDGYFTATLVPFF--PGSPEVRTGCYHNTNQTGYIRIRDSNPFNTPLLKNNLLSDPSDVGRLVRCLQKVVQIHQSFPTLFRMSLTAPANGV-IDEQYVRQNANTGAHIVGGCAVGDVLTDELQVKGVDRLMVVDASAIPQMPRSAGPAASVYMLAEFMADKIIAE-QGG 531
            GGGTSGC LAARLC   P     +LERG  R+A  +F V +PR     W+  SIT  + S P  G GGR +  LT  TLGGSS+IN  QW+ P       W + GLD   A A + RA   +G A P  PLRYA  D +++AA RAG     D   +  V  AW NRLA+    RR DACTAY++P    AC + L V  G T   + +E     AG  K      RAT V+ ++T D    R R +RAR+ ++L+AGPYG+P LL  SGVG  A L +AGV+  VDLPVG+    R  VGV+  ++GVP    N+A  + S+  R  W +G GG+LG   T   GR  +G   Y  A+       PG+P+  + C  N    G + + D++ +  P +   +L + +DV   V C++++ ++ ++F   F M  T P + V IDE  VR +A +G H VG  AVG VL  +L VKGVD L V+DASAIP MP SAGP +SVYMLAE  A+++I   QGG
Sbjct:   42 GGGTSGCTLAARLCAGLPAARIVVLERGPARNATEEFAVRSPRQTAAAWAVPSITTAWASAPAAGTGGRPSVLLTAATLGGSSSINAAQWSEPVGPDAAGWGVNGLDADAARAAYARAASTLGVARPPPPLRYAYGDAWLAAARRAGLPTVADETGRQAVRGAWLNRLAVTPSGRRVDACTAYVAPALRGACVERLTVRTGVTVTAVRLEGGTRDAGSDKDDGEPTRATGVEIVATKDGPAGRPRTLRARRAVLLAAGPYGTPQLLLLSGVGRPADLTAAGVTPRVDLPVGQGGVMRPMVGVNGEYAGVPLAAVNNATLLGSAAARAAWAAGRGGVLGMASTMGIGRVASGRGAYLIASFTTLARPPGTPDYTSVCMINPASRGRLSLADASVWTPPTVTTGMLDEAADVATAVTCVRRLRRVLRAFAPAFGMKETVPGDNVDIDEAVVRASAISGLHYVGTAAVGRVLDGDLGVKGVDGLYVIDASAIPSMPTSAGPMSSVYMLAEHAAERLIRRYQGG 561          
The following BLAST results are available for this feature:
BLAST of Gvermi12671.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IQS5_9FLOR4.230e-26469.10Oxygen-dependent choline dehydrogenase n=1 Tax=Gra... [more]
A0A2V3IQR9_9FLOR5.120e-20355.66Oxygen-dependent choline dehydrogenase n=1 Tax=Gra... [more]
A0A2V3J0J7_9FLOR1.320e-18854.72Oxygen-dependent choline dehydrogenase n=1 Tax=Gra... [more]
A0A2V3IGB8_9FLOR1.060e-17450.29Oxygen-dependent choline dehydrogenase n=1 Tax=Gra... [more]
R7QGX9_CHOCR3.730e-12343.18GMC_OxRdtase_N domain-containing protein n=1 Tax=C... [more]
A0A2V3IL82_9FLOR1.350e-12143.55Pyranose dehydrogenase 3 n=1 Tax=Gracilariopsis ch... [more]
A0A1X6NKG3_PORUM1.770e-12044.23GMC_OxRdtase_N domain-containing protein n=1 Tax=P... [more]
A0A515J4W6_NEOYE1.850e-12043.22Choline dehydrogenase n=1 Tax=Neopyropia yezoensis... [more]
A0A515J4J7_NEOYE2.480e-11542.80Choline dehydrogenase n=1 Tax=Neopyropia yezoensis... [more]
A0A1X6PK05_PORUM8.680e-11442.31GMC_OxRdtase_N domain-containing protein n=1 Tax=P... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012132Glucose-methanol-choline oxidoreductasePIRSFPIRSF000137Alcohol_oxidasecoord: 385..532
e-value: 4.9E-24
score: 82.9
coord: 17..362
e-value: 7.2E-46
score: 155.0
IPR012132Glucose-methanol-choline oxidoreductasePANTHERPTHR11552GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASEcoord: 26..526
IPR000172Glucose-methanol-choline oxidoreductase, N-terminalPFAMPF00732GMC_oxred_Ncoord: 27..310
e-value: 1.8E-38
score: 132.6
IPR000172Glucose-methanol-choline oxidoreductase, N-terminalPROSITEPS00624GMC_OXRED_2coord: 275..289
IPR007867Glucose-methanol-choline oxidoreductase, C-terminalPFAMPF05199GMC_oxred_Ccoord: 395..519
e-value: 7.5E-19
score: 68.6
IPR036188FAD/NAD(P)-binding domain superfamilyGENE3D3.50.50.60coord: 27..523
e-value: 1.4E-78
score: 267.3
IPR036188FAD/NAD(P)-binding domain superfamilySUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 25..528
NoneNo IPR availableGENE3D3.30.410.40coord: 157..468
e-value: 1.4E-78
score: 267.3
NoneNo IPR availablePANTHERPTHR11552:SF147CHOLINE DEHYDROGENASE, MITOCHONDRIALcoord: 26..526
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..532
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availableSUPERFAMILY54373FAD-linked reductases, C-terminal domaincoord: 368..474

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:272892..274490 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12671.t1Gvermi12671.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 272892..274490 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12671.t1 ID=Gvermi12671.t1|Name=Gvermi12671.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=533bp
MSAFRLVYHTFVLLAFFCHAFADDFTDFLIVGGGTSGCILAARLCTAFPN
LHTTLLERGLPRSAQSDFLVEAPRNLYQTWSDRSITEFFESLPDDGIGGR
VTPTLTGTTLGGSSAINGMQWTVPTAGSVESWQIQGLDTATASAYFRRAY
DAVGFAPPQSPLRYADDYVSAAMRAGFMPSDDPIVQPPVSAWQNRLAIDS
EFRRNDACTAYLSPVRNAACSQNLRVLEGATADKILIENVAGGGKRATAV
DTISTSDRVSRNRVRARKRIILSAGPYGSPTLLQRSGVGSTATLASAGVS
QVVDLPVGERSTTRASVGVSSTFSGVPDEPANDAQAVASSLQRTIWESGN
GGLLGTPVTAANGRTGDDGYFTATLVPFFPGSPEVRTGCYHNTNQTGYIR
IRDSNPFNTPLLKNNLLSDPSDVGRLVRCLQKVVQIHQSFPTLFRMSLTA
PANGVIDEQYVRQNANTGAHIVGGCAVGDVLTDELQVKGVDRLMVVDASA
IPQMPRSAGPAASVYMLAEFMADKIIAEQGGV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012132GMC_OxRdtase
IPR000172GMC_OxRdtase_N
IPR007867GMC_OxRtase_C
IPR036188FAD/NAD-bd_sf