Gvermi12670.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12670.t1
Unique NameGvermi12670.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length543
Homology
BLAST of Gvermi12670.t1 vs. uniprot
Match: A0A2V3IQR9_9FLOR (Oxygen-dependent choline dehydrogenase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQR9_9FLOR)

HSP 1 Score: 768 bits (1984), Expect = 1.850e-275
Identity = 377/516 (73.06%), Postives = 432/516 (83.72%), Query Frame = 0
Query:   25 QTTDFLIVGGGTAGCVLASKLCTAFPNQRITVIERGLPRTPASNFRVQAPRNLFSVLSDRSVAELIPSLPDVGINSRGVDAVTGSTLGGSTAINGMQWTVPFPGTVEQWGVHNLTTTLADTYFRSIYDKVGFGPPQNPLQYADEYVQAGIDSGFELSQDPFE-QPFRSIWQTRLSITSSFRRNDACSAYLTPVLQTSCSRNINLMQGLTVSKIVFQRTTNSTVPTEPPSLKAVAVDTVPSPNSFQQAQRINVSKEILVTAGPYNSPKLLQLSGIGLKSVLEAASVPQILNLPVGEATICRASGTIPSTYTGVPDEPANNQTLINSPEARQQWEAGSGGILGTPVSAANGRAGTDAYFGSTLVPFVPGPPEVRSACYHNTETTGYLRIRDSNPFSPPLVKYNLLSSQQDVQRLTNCLKDMADLHRKFPPQFQMSFMYPPNGEITEGYVRSVAQWGAHFVGGCPIGDVLEGDFKVKGVHNLRVIDASAIRSMPVSAGPMASVYMLAELMGDRLVDQYK 539
            Q TDFLIVGGGTAGCVLASKLC AFPN  IT++ERGLPR+P S+F V APR LF VL DRSV E I SLPD GIN R   A+TG+TLGGST INGMQWT+P PGT+EQWGV NLTT  AD YFR IY+KVGFGPPQNPLQYAD+YV AG+ +GFEL+ +PF+    RSIWQTRLSI S+FRRNDA SAYL P+L  SC++N+ ++QG T SKIVF ++T+S   T   +++A  VDTVPSP S  +AQR    +E+LVTAGPYNSPKLLQLSG+G ++VL+AA V Q+L LPVGEAT+ RASGTIPSTY+GVPDE ANN TL+NSPEARQQWEAG GGIL TPVSAANGRAGTDAYFG T+VPFVPGPPE+RSACYHNTETTGYLRIRDSNPFS PL+K N LSSQ DV RL  CL++MAD+HR+FP  F+M F YPPNG +TEGYVRSVAQWGAHFVGGC IGDV+ G+FKVKG   LRVIDAS+I +MPVSAGPMASVY+LAELMGDRLV++YK
Sbjct:   20 QFTDFLIVGGGTAGCVLASKLCVAFPNAHITILERGLPRSPQSDFLVHAPRKLFDVLGDRSVGEAITSLPDAGINGRTTVALTGATLGGSTTINGMQWTLPLPGTIEQWGVPNLTTASADPYFRRIYNKVGFGPPQNPLQYADDYVSAGVQAGFELNNNPFDTSTLRSIWQTRLSIDSNFRRNDAYSAYLRPLLDNSCAKNVAVVQGATASKIVFTQSTDSN--TGATTVRATGVDTVPSPGSTHKAQRYWARREVLVTAGPYNSPKLLQLSGVGTRAVLDAAGVAQVLELPVGEATVGRASGTIPSTYSGVPDEAANNITLVNSPEARQQWEAGLGGILSTPVSAANGRAGTDAYFGCTIVPFVPGPPELRSACYHNTETTGYLRIRDSNPFSAPLLKNNFLSSQADVNRLKRCLENMADVHRQFPASFKMRFKYPPNGVVTEGYVRSVAQWGAHFVGGCAIGDVVTGEFKVKGCSGLRVIDASSIPTMPVSAGPMASVYLLAELMGDRLVEEYK 533          
BLAST of Gvermi12670.t1 vs. uniprot
Match: A0A2V3IQS5_9FLOR (Oxygen-dependent choline dehydrogenase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQS5_9FLOR)

HSP 1 Score: 625 bits (1611), Expect = 8.160e-219
Identity = 299/518 (57.72%), Postives = 378/518 (72.97%), Query Frame = 0
Query:   21 VKAQQTTDFLIVGGGTAGCVLASKLCTAFPNQRITVIERGLPRTPASNFRVQAPRNLFSVLSDRSVAELIPSLPDVGINSRGVDAVTGSTLGGSTAINGMQWTVPFPGTVEQWGVHNLTTTLADTYFRSIYDKVGFGPPQNPLQYADEYVQAGIDSGFELSQDPFEQPFRSIWQTRLSITSSFRRNDACSAYLTPVLQTSCSRNINLMQGLTVSKIVFQRTTNSTVPTEPPSLKAVAVDTVPSPNSFQQAQRINVSKEILVTAGPYNSPKLLQLSGIGLKSVLEAASVPQILNLPVGEATICRASGTIPSTYTGVPDEPANNQTLINSPEARQQWEAGSGGILGTPVSAANGRAGTDAYFGSTLVPFVPGPPEVRSACYHNTETTGYLRIRDSNPFSPPLVKYNLLSSQQDVQRLTNCLKDMADLHRKFPPQFQMSFMYPPNGEITEGYVRSVAQWGAHFVGGCPIGDVLEGDFKVKGVHNLRVIDASAIRSMPVSAGPMASVYMLAELMGDRLVDQY 538
            V AQ  TDFL+VGGGT+GC++A++LC+AFPN  +T++ERGLPR+P SNF V APRNLF+  SDRS+ E   SLPD G+  R    +TG TLGGS+AINGMQWTVP  G+VE+WG+  L+T  A  Y+R  YD VGFGPPQ PLQYAD+YV A + +GF  S DP  QP RS+WQ RL++ ++FRRNDACSAY++P L +SC+RN+ ++QG+T +KIV    +            AVAVDT+ S +      R    +E+L+T+GPY SPKLLQLSGIG  S L AA V Q LNLPVGE ++ RAS  + STYTGVPDEPANN   +NS + R+ W++G+GG+LGTPV+AANGRAG D YF    +PF PG PE+R+ CYHNT +TG++RIRDSNPFS PL+  NLLS  +DVQRL  CL   A++HRKFP  FQM+F  P  G  T  YV+  A  GAH VGGCP+GDVL  + +VKGV +LRV+DAS+IR+MP SAGP ASVYMLAE M DR+++ +
Sbjct:   23 VNAQSFTDFLVVGGGTSGCIMAARLCSAFPNLHVTLLERGLPRSPQSNFLVSAPRNLFNSWSDRSITEFFESLPDAGLQGRTTPTLTGITLGGSSAINGMQWTVPMSGSVEEWGIRGLSTETAAPYYRRAYDTVGFGPPQAPLQYADDYVTAALSAGFSSSDDPISQPARSVWQNRLALDANFRRNDACSAYVSPALSSSCARNLAVVQGVTATKIVMSDLSGG-------GKVAVAVDTISS-SDRSTVHRYWARREVLITSGPYGSPKLLQLSGIGSASTLAAAGVVQTLNLPVGERSVTRASAGVESTYTGVPDEPANNVEAVNSAQQREIWDSGNGGLLGTPVTAANGRAGEDGYFTVGFIPFFPGRPELRTGCYHNTNSTGFVRIRDSNPFSTPLLNNNLLSDSEDVQRLVRCLNAAAEIHRKFPASFQMTFRSPAGGVATADYVKRTANTGAHIVGGCPVGDVLTDELRVKGVESLRVVDASSIRTMPKSAGPAASVYMLAEYMADRIIEDH 532          
BLAST of Gvermi12670.t1 vs. uniprot
Match: A0A2V3IGB8_9FLOR (Oxygen-dependent choline dehydrogenase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGB8_9FLOR)

HSP 1 Score: 528 bits (1361), Expect = 4.690e-181
Identity = 257/516 (49.81%), Postives = 352/516 (68.22%), Query Frame = 0
Query:   25 QTTDFLIVGGGTAGCVLASKLCTAFPNQRITVIERGLPRTPASNFRVQAPRNLFSVLSDRSVAELIPSLPDVGINSRGVDAVTGSTLGGSTAINGMQWTVPFPGTVEQWGVHNLTTTLADTYFRSIYDKVGFGPPQNPLQYADEYVQAGIDSGFELSQDPFEQPFRSIWQTRLSITSSFRRNDACSAYLTPVLQTSCSRNINLMQGLTVSKIVFQRTTNSTVPTEPPSLKAVAVDTVP-SPNSFQQAQRINVSKEILVTAGPYNSPKLLQLSGIGLKSVLEAASVPQILNLPVGEATICRASGTIPSTYTGVPDEPANNQTLINSPEARQQWEAGSGGILGTPVSAANGRAGTDAYFGSTLVPFVPGPPEVRSACYHNTETTGYLRIRDSNPFSPPLVKYNLLSSQQDVQRLTNCLKDMADLHRKFPPQFQMSFMYPPNGEITEGYVRSVAQWGAHFVGGCPIGDVLEGDFKVKGVHNLRVIDASAIRSMPVSAGPMASVYMLAELMGDRLVDQYK 539
            Q +D LIVG GTAGC LA++LCTA PN  IT++ER  PR+P + F V+APR LFS      + E   SLP+  +N R    +TG+TLGG++AI G+QWTVP PG++E WG+  LTT  A  YF   YD++    P +PL YA +Y+ A + +GF  S D  +   RS+WQ RL+I S FRR D+CSAY+ P+L   C+ N+ L+Q +TVSK++  R+         PSL+A  V+ +  S  +  Q+      +E ++ AGPY SPK+LQLSGIG + VL+ A+V  +L+LPVG  T+CR SG+I S YTGVP+EP+NN +L+  PE R +WE G   +L TPVSAANGRAG D YFGS+ +P+ PG PEVRS C+ N E+ G++RIRDSNPFSPP V+ NLL ++QD+ R+  CL+ +  +H  FP +F M+F  P  G++TE ++RS    GAHFV GCP+G+VL    +V+GV+ LRVID+S++R MP+SAGP+AS+ MLAE M D +  +YK
Sbjct:   19 QDSDILIVGAGTAGCPLAARLCTALPNLTITLLERASPRSPDAEFYVRAPRKLFSTWVSPELLETFESLPNPALN-RSHTVLTGATLGGTSAITGLQWTVPLPGSIENWGIEGLTTESARAYFERAYDQLSVSVPASPLLYASDYINAAVRAGFSRSADHLDSIERSVWQNRLTIDSQFRRTDSCSAYVLPLLGGRCAHNLRLIQNVTVSKLLLSRSG--------PSLQAHGVEAMQTSDRNRTQSLTFRARRETILAAGPYGSPKILQLSGIGPQEVLKEANVSCLLDLPVGAKTVCRTSGSISSRYTGVPNEPSNNFSLVEDPEQRARWERGEPSVLRTPVSAANGRAGRDGYFGSSFIPYWPGIPEVRSFCHSNVESRGFIRIRDSNPFSPPFVQNNLLGTKQDMDRMDRCLRSLMRVHESFPKRFNMTFTKPEQGKLTEDWIRSTINTGAHFVSGCPVGEVLTERLEVRGVNGLRVIDSSSLREMPISAGPLASIVMLAEYMADTISKEYK 525          
BLAST of Gvermi12670.t1 vs. uniprot
Match: A0A2V3J0J7_9FLOR (Oxygen-dependent choline dehydrogenase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0J7_9FLOR)

HSP 1 Score: 529 bits (1363), Expect = 4.940e-181
Identity = 261/515 (50.68%), Postives = 350/515 (67.96%), Query Frame = 0
Query:   25 QTTDFLIVGGGTAGCVLASKLCTAFPNQRITVIERGLPRTPASNFRVQAPRNLFSVLSDRSVAELIPSLPDVGINSRGVDAVTGSTLGGSTAINGMQWTVPFPGTVEQWGVHNLTTTLADTYFRSIYDKVGFGPPQNPLQYADEYVQAGIDSGFELSQDPFEQPFRSIWQTRLSITSSFRRNDACSAYLTPVLQTSCSRNINLMQGLTVSKIVFQRTTNSTVPTEPPSLKAVAVDTVP--SPNSFQQAQRINVSKEILVTAGPYNSPKLLQLSGIGLKSVLEAASVPQILNLPVGEATICRASGTIPSTYTGVPDEPANNQTLINSPEARQQWEAGSGGILGTPVSAANGRAGTDAYFGSTLVPFVPGPPEVRSACYHNTETTGYLRIRDSNPFSPPLVKYNLLSSQQDVQRLTNCLKDMADLHRKFPPQFQMSFMYPPNGEITEGYVRSVAQWGAHFVGGCPIGDVLEGDFKVKGVHNLRVIDASAIRSMPVSAGPMASVYMLAELMGDRLVDQ 537
            Q +DF++VG GTAGC LA+KLC+A PN  IT++ERG PR+  S F V+APRNLF + SDR+V +  PS PD GI +R    + G+T GGS+AINGMQWTVP PG+VEQW ++ LTT  A ++++  Y  V F  P+ PLQYAD+Y++A + +GF  S +PF QP R++WQ RL+I  +FRR+D+CSAYL PV+ + C+RN+ L+   T S+I+F+R+       +   LKAV V T+   SPN  +        + ++++AGPY S  LLQLSG+G KSVL+AA++ QIL LPVG+  + RAS ++ S YTGV DEPANN TL+NS   R ++E G GGIL TPVSAANGR G D YFG+  VPF PGP E R+ C+HN  T   +     +PF  P VK NLL++  +V +L +CL+ + D+HR  PP+F  +   P  G +TE YVR  A  GAHFVG C + DV++GD  V  V  L+V+DAS IR MP SAGP ASVYM+AE M +R+  +
Sbjct:   32 QFSDFVVVGAGTAGCALAAKLCSALPNHHITLLERGAPRSDESEFLVEAPRNLFPLWSDRNVTQAYPSEPDEGIQNRSTTVLAGTTAGGSSAINGMQWTVPLPGSVEQWRINGLTTRSASSFYQRAYQTVEFDEPKFPLQYADDYIRAAVRAGFPQSTNPFVQPDRAVWQNRLAIDGTFRRSDSCSAYLKPVMNSVCARNLQLVLSQTASRILFERSGE-----DGGRLKAVGVQTLDTFSPNITRS---FYARRNVVLSAGPYESAHLLQLSGVGPKSVLDAANISQILELPVGQTCVSRASASVASRYTGVRDEPANNMTLVNSQAERDRFETGRGGILATPVSAANGRVGGDGYFGAGFVPFFPGPREFRTQCFHNGRTLASVTTVSDDPFDTPKVKLNLLANDNEVGQLVSCLQQVLDIHRALPPEFNATVTEPVGGVVTEAYVRETANTGAHFVGCCAVDDVVDGDLNVLRVDGLKVVDASVIREMPKSAGPAASVYMIAEFMAERMSSE 538          
BLAST of Gvermi12670.t1 vs. uniprot
Match: A0A2V3IL82_9FLOR (Pyranose dehydrogenase 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IL82_9FLOR)

HSP 1 Score: 406 bits (1043), Expect = 4.260e-132
Identity = 224/540 (41.48%), Postives = 337/540 (62.41%), Query Frame = 0
Query:   10 LLTVFTVILALVKAQQ--TTDFLIVGGGTAGCVLASKLCTAFPNQRITVIERGLPRTPASNFRVQAPRNLFSVLSDRSVAELIPSLPDVGINSRGVDAVTGSTLGGSTAINGMQWTVPFPGTVEQWGVHNLTTTLADTYFRSIYDKVGFGP--PQNPLQYADEYVQAGIDSGFELSQDPFEQPFR-SIWQTRLSITSSFRRNDACSAYLTPVLQTSCSRNINLMQGLTVSKIVFQRTTNSTVPTEPPSLKAVAVDTVPSPNSFQQAQRINVS-KEILVTAGPYNSPKLLQLSGIGLKSVLEAASVPQILNLPVGEATICRASGTIPSTYTGVPDEPANNQTLINSPEARQQWEAGSGGILGTPVSAANGRAGTDAYFGSTLV--PFVPG--PPEVRSACYHNTETTGYLRIRDSNPFSPPLVKYNLLSSQQDVQRLTNCLKDMADLHRKFPPQFQMSFMYPPNGEITEGYVRSVAQWGAHFVGGCPIGDVLEGDFKVKGVHNLRVIDASAIRSMPVSAGPMASVYMLAELMGDRLVDQYK 539
            LLT+  V L L+K  +  T+DF+IVGGGT+GCVLA++LC AFP+  I+V+ERG P   ++ F   A RN+     D  ++E   SLP+ G++ R V   TG+ LGGS++ N +Q+ VP  G V   G+  L+   A   +R +Y KVGF P  P   L+YAD+Y++AG ++GFE+  DPF    R ++W TR SI    RR D+C+AYL   ++  CS N+ ++QG+TV +++F RT  S        L+A  V+ V S +   Q +++ ++ KE+L++AGPY SPKLLQLSGIG + VL+   +  + +LPVG +T  RA+    S YTGVP EPANN T++NS +ARQQWE G GG+ G+     NG      Y  + L     + G   P + S C  N  + GY+ + DSNPFS PLV+ +LL +++D+ R+  CL+ +  +HR FPPQF+++ +   + +  E  +R+ A    H+VGGC +G V+  D +V+GV+ LR++DAS +R +P SAGP+++ Y++AE     L+ +Y+
Sbjct:   43 LLTIGLVFLQLLKVSRASTSDFIIVGGGTSGCVLAARLCVAFPDASISVLERGKPLNESARFVKDAMRNVIDAWVDPQISESFLSLPNDGLSGRRVLLTTGAVLGGSSSSNAVQFVVPLEGYVRSLGIAGLSPMRAKRLYRRVYRKVGFRPQPPLVKLRYADDYLEAGRNAGFEIEDDPFRNNARLAMWNTRSSIDGGGRRVDSCAAYLNENVRDRCSANLRVVQGVTVIRVLFSRTGLS--------LRATGVEYVSSDDKQLQDRKVMLARKEVLLSAGPYGSPKLLQLSGIGPREVLDRVGLKTVRDLPVGVSTQSRAASGHFSAYTGVPLEPANNSTVLNSTDARQQWENGLGGVYGSSPFPMNGVVKDICYLTNVLAFGGLLEGLDEPLLASFCLGNPTSRGYICLNDSNPFSSPLVQLDLLGNREDLLRIQRCLRLVQKVHRSFPPQFKLTDLSQTSADEEE--IRNTALTPFHYVGGCAVGSVVRSDLRVRGVYGLRIVDASVLRHIPTSAGPLSTTYVVAEHAAGDLIRRYR 572          
BLAST of Gvermi12670.t1 vs. uniprot
Match: R7QGX9_CHOCR (GMC_OxRdtase_N domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGX9_CHOCR)

HSP 1 Score: 374 bits (959), Expect = 1.100e-118
Identity = 209/539 (38.78%), Postives = 312/539 (57.88%), Query Frame = 0
Query:   13 VFTVILALVKAQQTTDFLIVGGGTAGCVLASKLCTAFPNQRITVIERGLPRTPASNFRVQAPRNLFSVLSDRSVAELIPSLPDVGINSRGVDAVTGSTLGGSTAINGMQWTVPFPGTVEQWGVHNLTTTLADTYFRSIYDKVGFGPPQNPLQ--YADEYVQAGIDSGFEL-SQDPFE--QPFRSIWQTRLSITSSFRRNDACSAYLTPVLQTSCSRNINLMQGLTVSKIVFQRTTNSTVPTEPPSLKAVAVDTVPSPNSFQQAQ----RINVSKEILVTAGPYNSPKLLQLSGIGLKSVLEAASVPQILNLPVGEATICRASGTIPSTYTGVPDEPANNQTLINSPEARQQWEAGSGGILGTPVSAANGRAGTDAYFGST--LVPFVPGPPEVRSACYHNTETT-GYLRIRDSNPFSPPLVKYNLLSSQQDVQRLTNCLKDMADLHRKFPPQFQMSFMYPPNGEITEGYVRSVAQWGAHFVGGCPIGDVLEGDFKVKGVHNLRVIDASAIRSMPVSAGPMASVYMLAELMGDRLVDQYK 539
            V  + + L  A    D LI+G GT+GC LA++LC A P + IT++ER  PR  A++F V++PR ++      SV E I +LP  G+  R V   TG+TLGG++AINGMQW VP  G+V+ WG+ NLTT  A  Y++  +  +GF     PL+  + D ++ A   +G++  ++DPF+  + F   ++ R++I  +  R D+C+AYL+PVL T C+ N+ L+QG +V++++  R +           +A  V+   S +S  + +    R+    E++VTAGP+ SPKLLQLSGIG + VL+ A +P  + LPVG  T+ R    + S     P EP+NN TL+N    R  W+AG G +LG     ANGR   DAY   T    P +     V + C  N   + G++R+   N  +P  V+  LL  + D  R+  CL  +  LH + P +F   +  P +G+ITE ++R  A W  H VGGC +G+VL    +VKGV  LRV+D+S++R+MP SAGPMAS YMLAE M + +  + K
Sbjct:  130 VIALFVTLAGATTPPDLLIIGAGTSGCALAARLCVALPTRNITLLERASPRNSAADFLVRSPRQMWLAWQSSSVVEPIRTLPSSGLLGRAVPVFTGATLGGTSAINGMQWVVPRDGSVDTWGIRNLTTNSARRYYQRAFRTIGFAAQIPPLRQRHVDAFLGAARRAGYDTGNKDPFDPSEAF-DFFENRMAIDLAGVRRDSCTAYLSPVLNTKCAHNLRLVQGASVTRLLLSRESRP---------RATGVEYTVSGSSAGERRTRKLRVAAGGELIVTAGPFGSPKLLQLSGIGPRDVLQKAGIPVRVGLPVGTHTVARPFAALDSEIQA-PLEPSNNSTLLNDTAQRTLWDAGRGSVLGRSSFIANGRDRADAYLTGTGSFFPALVDRSIVSTNCNSNVALSRGFVRVTTRNASAPLDVQMALLQKRADFLRMQRCLLRLRRLHEELPRRFTAKWANPSDGQITERWIRDNAGWAGHMVGGCAVGEVLTDGLRVKGVRGLRVVDSSSLRNMPESAGPMASTYMLAEFMAEVIGKEIK 657          
BLAST of Gvermi12670.t1 vs. uniprot
Match: R7QK16_CHOCR (GMC_OxRdtase_N domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QK16_CHOCR)

HSP 1 Score: 368 bits (945), Expect = 7.280e-118
Identity = 208/531 (39.17%), Postives = 303/531 (57.06%), Query Frame = 0
Query:   28 DFLIVGGGTAGCVLASKLCTAFPNQRITVIERGLPRTPASNFRVQAPRNLFSVLSDRSVAELIPSLPDVGINSRGVDAVTGSTLGGSTAINGMQWTVPFPGTVEQWGVHNLTTTLADTYFRSIYDKVGFGP-PQNPLQ-YADEYVQAGIDSGFELSQDPFEQPFR-SIWQTRLSITSSFRRNDACSAYLTPVLQTSCSRNINLMQGLTVSKIVFQRTTNSTVPTEPPSLKAVAVDTVPSPNSFQQAQRINV-SKEILVTAGPYNSPKLLQLSGIGLKSVLEAASVPQILNLPVGEATICRASGTIPSTY-TGVPDEPANNQTLINSPEARQQWEAGSGGILGT---------------PVSAANGRAGTDAYFGSTLVPFVPGPPEVRSACYHNTETTGYLRIRDSNPFSPPLVKYNLLSSQQDVQRLTNCLKDMADLHRKFPPQFQMSFMYPPNGEITEGYVRSVAQWGAHFVGGCPIGDVLEGDFKVKGVHNLRVIDASAIRSMPVSAGPMASVYMLAELMGDRLVDQY 538
            DF+IVGGGTAGC +A++LC+      + V+ERG+PR+P S   ++A RN+     D ++++   S PD  +  +  + +  +TLGG+++IN MQW +P      +WG+  L++ +A  ++R  Y KVGF   PQ+  Q Y DEY  A   + F     PF+   R ++W+  +++T S RR D+C+AYL PVL   C RN+ L+QG TV++++     NSTVP      +A+ V+ V S ++    + + + SKE++++AGP+ SPKLLQLSGIG +S L+AA+V   ++LPVG+ T  RA G + S Y  G P EP+NN T++N PE  + W      +LG+               P+S AN     D                ++S C  N  + GYLRI D +PFS P V  N L S+ DV R+  CL+    +HR  P  FQ+    P   +  +  +R    +  HFVGGC +G V+  D  VKGV  LRV+D+S  RSMPVSAGPMAS YMLAE + D+L   Y
Sbjct:   45 DFVIVGGGTAGCTIAARLCSRVQTASVVVLERGVPRSPQSELLMRAARNIGRTWEDPNLSQTFQSEPDPSMAGQRQEIIDANTLGGASSINAMQWGIPLGNKEGRWGIRGLSSRVAKRFYRRAYRKVGFAQQPQSLRQLYGDEYADAASRTRFTREFSPFKTSLREAVWEMAVAVTPSGRRIDSCTAYLKPVLNGRCRRNLRLIQGTTVTRVLLD---NSTVP------RAIGVEYVDSKDTRLTNKNVLLASKEVILSAGPFGSPKLLQLSGIGPRSHLQAANVETRVDLPVGQRTQSRALGFVSSQYYKGQPLEPSNNSTILNGPETLRSWRRRQPSVLGSTGFATMAVLKDIGYVPMSTANDATTLDERI-------------LQSFCLTNPTSYGYLRILDGDPFSTPKVLLNALGSRTDVNRMRTCLERFVRVHRNLPASFQLETTCPAP-DFNDTQLRQRTSFSLHFVGGCRVGAVVRSDLSVKGVEGLRVVDSSVFRSMPVSAGPMASTYMLAEFVADKLAKMY 552          
BLAST of Gvermi12670.t1 vs. uniprot
Match: A0A2V3IEF3_9FLOR (Oxygen-dependent choline dehydrogenase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEF3_9FLOR)

HSP 1 Score: 334 bits (857), Expect = 4.690e-106
Identity = 183/448 (40.85%), Postives = 269/448 (60.04%), Query Frame = 0
Query:   92 SLPDVGINSRGVDAVTGSTLGGSTAINGMQWTVPFPGTVEQWGVHNLTTTLADTYFRSIYDKVGFGPPQNPLQ--YADEYVQAGIDSGFELSQDPFEQP-FRSIWQTRLSITSSFRRNDACSAYLTPVLQTSCSRNINLMQGLTVSKIVFQRTTNSTVPTEPPSLKAVAVDTVPSPNSFQQA--QRINVSKEILVTAGPYNSPKLLQLSGIGLKSVLEAASVPQILNLPVGEATICRASGTIPSTYTGVPDEPANNQTLINSPEARQQWEAGSGGILGTPVSAANGRAGTDAYFGST--LVPFVPGPPEVRSACYHNTETTGYLRIRDSNPFSPPLVKYNLLSSQQDVQRLTNCLKDMADLHRKFPPQFQMSFMYPPNGEITEGYVRSVAQWGAHFVGGCPIGDVLEGDFKVKGVHNLRVIDASAIRSMPVSAGPMASVYMLAELMGD 532
            SLP+  +N+R     TG+TLGG+++INGMQ+++P   TVE+WG+  LTT  +  +F+ + D++G   P+  L+  Y   Y+ A   +GF  S D ++    RSI + RL++  +  R D+C+AYL+P ++  C  N+ L+Q  TV++I+  ++            +A  VD V S N  Q +  +RI   KE++V AGP+ SPKLLQ+SGIG   VL  A V   + LPVG     +    +   YTG P EP+ N TL+NS E  +++++G GG+LG   S A G+   + +  +     P V     + +AC +N  + GY +IRD NPFS P V+  LL++Q D++R+  CLK + D  + F P F+ S   P  GEITE +VR  A W  HFVGGCP+GDVL GD  V+ +  LRV+DAS++R MP+SAGPM SVYM+AE M +
Sbjct:   16 SLPNPVLNNRSFRVFTGNTLGGTSSINGMQFSIPIKRTVEKWGIEGLTTASSKKFFQRVIDQIGVAVPEGNLRHKYVRNYINAARKAGFSESVDLWDDSNSRSISENRLTVDPNGFRRDSCTAYLSPTIKDKCKTNLRLVQDATVTRILLSKSRPQ---------RAFGVDYVHS-NDTQMSYPKRILARKEVIVCAGPFGSPKLLQVSGIGPAHVLRKAGVKVRVALPVGRRCQAKTVTPVDMKYTGAPLEPSMNSTLVNSEEELRKFKSGRGGLLGITPSFATGKDNRNGFISANGHTFPTVFDRNALGAACSNNVRSFGYYQIRDKNPFSTPDVQLALLTNQDDLRRVIKCLKGVKDTFQNFAPLFKSSIENPVGGEITEEWVRRTAVWNGHFVGGCPVGDVLRGDLTVRKMRQLRVVDASSLRRMPLSAGPMGSVYMIAEYMAE 453          
BLAST of Gvermi12670.t1 vs. uniprot
Match: A0A515J4W6_NEOYE (Choline dehydrogenase n=1 Tax=Neopyropia yezoensis TaxID=2788 RepID=A0A515J4W6_NEOYE)

HSP 1 Score: 334 bits (856), Expect = 1.750e-104
Identity = 193/521 (37.04%), Postives = 286/521 (54.89%), Query Frame = 0
Query:   37 AGCVLASKLCTAFPNQRITVIERGLPRTPASNFRVQAPRNLFSVLSDRSVAELIPSLPDVGINSRGVDAVTGSTLGGSTAINGMQWTVPFPGTVEQWGVHNLTTTLADTYFRSIYDKVGFGPPQNPLQ--YADEYVQAGIDSGFELSQDP-FEQPFRSIWQTRLSITSSFRRNDACSAYLTPVLQTSCSRNINLMQGLTVSKIVFQR---------TTNSTVPTEPPSLKAVAVDTVPSPNSFQ-QAQRINVSKEILVTAGPYNSPKLLQLSGIGLKSVLEAASVPQILNLPVGEATICRASGTIPSTYTGVPDEPANNQTLINSPEARQQWEAGSGGILGTPVSAANGRA--GTDAYFGSTLVP-FVPGPPEVRSACYHNTETTGYLRIRDSNPFSPPLVKYNLLSSQQDVQRLTNCLKDMADLHRKFPPQFQMSFMYPPNGEITEGYVRSVAQWGAHFVGGCPIGDVLEGDFKVKGVHNLRVIDASAIRSMPVSAGPMASVYMLAELMGDRLVDQYKLA 541
            AGC LA++LC A P +R+ ++ERG  R     F V++PR   +  +  S+ E  PS P+  +  R V   TG+TLGG +A+N  QW+VP  GTV+ WG+  L  T A  YFR    ++    P+  L+  Y D+++ A   +G     D  +  P R  W  RL++  + RR DAC+AY+ P L+  C+ N+ + QG+TV+K++++          TT +         +   V  V S +    + + +   + ++  AG   SPKLLQLSGIG +  L  A V   ++LPVGE    R    + S Y GVP    NN +++ +P  R++WEAG GG+LG    A   R   G   Y  ++  P  VPG P   + C  N  +TG L + D++PFS P+V+   L    +V  L  CL+ MA +   FPP F+M    P  G + E YVR+ ++   H VGGC +G V++G F+VKG  NL V+D+SAI S+P+SAG MASVYMLAE   ++L+  ++ A
Sbjct:   47 AGCALAARLCAALPARRVVLLERGGRRNATEEFLVRSPRQAVAAWAVPSLLETFPSAPERALGRRRVQLATGATLGGGSAVNIGQWSVPLAGTVDGWGIPGLGDTAARRYFRRAARQLRVAVPRGGLRQAYVDDWLAAAARAGVPSVDDTVWPPPNRGSWVHRLTVDRAGRRRDACTAYVAPALKGVCAANLRVHQGVTVTKVLWEDDDGARAAGPTTAADGRRRRRGTRVAGVAYVASADGDAGRVRTLRARQAVISAAGAVGSPKLLQLSGIGRRRALRRAGVTPRVDLPVGERFQTRPFLGVVSEYAGVPLAAGNNASVVAAPATRRRWEAGRGGVLGVAAHAGLLRVPDGAGGYVTASFTPDAVPGEPVFGAYCMTNPSSTGRLTLADASPFSAPVVETRSLGEGHEVATLLACLRRMAAVAAAFPPAFRMRQTVPRRGRLDEAYVRASSEVSGHLVGGCQVGAVVDGGFRVKGFRNLYVVDSSAIPSIPLSAGTMASVYMLAEFAAEKLIRVFRAA 567          
BLAST of Gvermi12670.t1 vs. uniprot
Match: A0A1X6NKG3_PORUM (GMC_OxRdtase_N domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NKG3_PORUM)

HSP 1 Score: 335 bits (858), Expect = 1.120e-103
Identity = 204/519 (39.31%), Postives = 279/519 (53.76%), Query Frame = 0
Query:   35 GTAGCVLASKLCTAFPNQRITVIERGLPRTPASNFRVQAPRNLFSVLSDRSVAELIPSLPDVGINSRGVDAVTGSTLGGSTAINGMQWTVPFPGTVEQWGVHNLTTTLADTYFRSIYDKVGFGPPQNPLQ--YADEYVQAGIDSGFELSQD--PFEQPFRSIWQTRLSITSSFRRNDACSAYLTPVLQTSCSRNINLMQGLTVSKIVFQRTTNSTVPTEPPSLKAVAVDTVPSPNSFQ----QAQRINVSKEILVTAGPYNSPKLLQLSGIGLKSVLEAASVPQILNLP-VGEATICRASGTIPSTYTGVPDEPANNQTLINSPEARQQWEAGSGGILGTPVSAANGRA--GTDAYFGSTLVPF--VPGPPEVRSACYHNTETTGYLRIRDSNPFSPPLVKYNLLSS-QQDVQRLTNCLKDMADLHRKFPPQFQMSFMYPP-NGEITEGYVRSVAQWGAHFVGGCPIGDVLEGDFKVKGVHNLRVIDASAIRSMPVSAGPMASVYMLAELMGDRLVDQY 538
            GTAGC LA++LCTA P  R+ ++ERG PR     F V+A R   +   + +++E+I S P  G+  R V  + G+TLGGS+AIN  QWT P    V  WGV  LT + A  Y+      +G   P  PL+  Y +E+V A   +G     +  P   P R  W  R+++  + RR DAC+ Y+ P L  +C+ N+ L+QG+TV+K++ +               AV V  V S +           +   + ++  AGPY SPKLL LSGIG  + L AA V   + LP VG     R      +TY+GVP  PANN TL+  P   +QW AG GG+LG   +AA GR   G   Y  +   P+   PG  E  S C  N   TG L +  ++PF+ P+V+ NLL     +V  +  CL+ +  + R FPP + M  + PP +  I E  VR+    G H VGGC +G VL+G  +V+GV  L V+DASAI SM  SAGPMASVYMLAE   DRL  +Y
Sbjct:  136 GTAGCTLAARLCTALPRARVVLLERGAPRNGTEEFLVRAARLTTATWPEPTLSEIILSAPARGLGGRTVRLLAGTTLGGSSAINFGQWTTPPAAEVAAWGVTGLTASTAGAYYARAAAALGVAVPPPPLRQVYTEEWVDAAGAAGLPRVDEAAPGPTPRRGAWIHRIAVDPAGRRVDACAGYVAPALAGACADNLELVQGVTVTKVLLETRRGRRHGGGRHQPVAVGVQYVASADRAAGRAAATTTLRARRAVISAAGPYGSPKLLLLSGIGPPAALRAAGVTPTVTLPAVGARMQTRPFAQATATYSGVPLAPANNATLLADPATVEQWRAGRGGVLGVAAAAALGRQTDGLGTYIEAMFTPWRSAPGRREYVSTCLSNPSATGRLTLDGADPFAQPVVQTNLLGGGAAEVSTVVACLRRLRAITRSFPPAWGMREVEPPASRRIDEALVRATTVSGQHMVGGCAVGAVLDGRLRVRGVARLHVVDASAIPSMTSSAGPMASVYMLAEWAADRLAARY 654          
The following BLAST results are available for this feature:
BLAST of Gvermi12670.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IQR9_9FLOR1.850e-27573.06Oxygen-dependent choline dehydrogenase n=1 Tax=Gra... [more]
A0A2V3IQS5_9FLOR8.160e-21957.72Oxygen-dependent choline dehydrogenase n=1 Tax=Gra... [more]
A0A2V3IGB8_9FLOR4.690e-18149.81Oxygen-dependent choline dehydrogenase n=1 Tax=Gra... [more]
A0A2V3J0J7_9FLOR4.940e-18150.68Oxygen-dependent choline dehydrogenase n=1 Tax=Gra... [more]
A0A2V3IL82_9FLOR4.260e-13241.48Pyranose dehydrogenase 3 n=1 Tax=Gracilariopsis ch... [more]
R7QGX9_CHOCR1.100e-11838.78GMC_OxRdtase_N domain-containing protein n=1 Tax=C... [more]
R7QK16_CHOCR7.280e-11839.17GMC_OxRdtase_N domain-containing protein n=1 Tax=C... [more]
A0A2V3IEF3_9FLOR4.690e-10640.85Oxygen-dependent choline dehydrogenase n=1 Tax=Gra... [more]
A0A515J4W6_NEOYE1.750e-10437.04Choline dehydrogenase n=1 Tax=Neopyropia yezoensis... [more]
A0A1X6NKG3_PORUM1.120e-10339.31GMC_OxRdtase_N domain-containing protein n=1 Tax=P... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007867Glucose-methanol-choline oxidoreductase, C-terminalPFAMPF05199GMC_oxred_Ccoord: 403..528
e-value: 2.1E-19
score: 70.5
IPR000172Glucose-methanol-choline oxidoreductase, N-terminalPFAMPF00732GMC_oxred_Ncoord: 28..318
e-value: 1.3E-32
score: 113.4
IPR000172Glucose-methanol-choline oxidoreductase, N-terminalPROSITEPS00624GMC_OXRED_2coord: 284..298
IPR036188FAD/NAD(P)-binding domain superfamilyGENE3D3.50.50.60coord: 28..527
e-value: 1.5E-65
score: 224.1
IPR036188FAD/NAD(P)-binding domain superfamilySUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 25..538
NoneNo IPR availableGENE3D3.30.410.40coord: 156..476
e-value: 1.5E-65
score: 224.1
NoneNo IPR availablePIRSRPIRSR000137-2PIRSR000137-2coord: 401..539
e-value: 3.9E-20
score: 69.5
NoneNo IPR availablePANTHERPTHR11552:SF147CHOLINE DEHYDROGENASE, MITOCHONDRIALcoord: 26..534
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..542
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availableSUPERFAMILY54373FAD-linked reductases, C-terminal domaincoord: 375..448
NoneNo IPR availableTMHMMTMhelixcoord: 4..22
NoneNo IPR availableTMHMMTMhelixcoord: 29..51
IPR012132Glucose-methanol-choline oxidoreductasePIRSFPIRSF000137Alcohol_oxidasecoord: 16..362
e-value: 1.9E-36
score: 123.6
coord: 394..541
e-value: 1.2E-18
score: 64.8
IPR012132Glucose-methanol-choline oxidoreductasePANTHERPTHR11552GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASEcoord: 26..534

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:270365..271993 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12670.t1Gvermi12670.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 270365..271993 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12670.t1 ID=Gvermi12670.t1|Name=Gvermi12670.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=543bp
MCSIFPLFLLLTVFTVILALVKAQQTTDFLIVGGGTAGCVLASKLCTAFP
NQRITVIERGLPRTPASNFRVQAPRNLFSVLSDRSVAELIPSLPDVGINS
RGVDAVTGSTLGGSTAINGMQWTVPFPGTVEQWGVHNLTTTLADTYFRSI
YDKVGFGPPQNPLQYADEYVQAGIDSGFELSQDPFEQPFRSIWQTRLSIT
SSFRRNDACSAYLTPVLQTSCSRNINLMQGLTVSKIVFQRTTNSTVPTEP
PSLKAVAVDTVPSPNSFQQAQRINVSKEILVTAGPYNSPKLLQLSGIGLK
SVLEAASVPQILNLPVGEATICRASGTIPSTYTGVPDEPANNQTLINSPE
ARQQWEAGSGGILGTPVSAANGRAGTDAYFGSTLVPFVPGPPEVRSACYH
NTETTGYLRIRDSNPFSPPLVKYNLLSSQQDVQRLTNCLKDMADLHRKFP
PQFQMSFMYPPNGEITEGYVRSVAQWGAHFVGGCPIGDVLEGDFKVKGVH
NLRVIDASAIRSMPVSAGPMASVYMLAELMGDRLVDQYKLAL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007867GMC_OxRtase_C
IPR000172GMC_OxRdtase_N
IPR036188FAD/NAD-bd_sf
IPR012132GMC_OxRdtase