Gvermi12665.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12665.t1
Unique NameGvermi12665.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length455
Homology
BLAST of Gvermi12665.t1 vs. uniprot
Match: A0A2V3J0V9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0V9_9FLOR)

HSP 1 Score: 228 bits (581), Expect = 7.900e-66
Identity = 155/470 (32.98%), Postives = 255/470 (54.26%), Query Frame = 0
Query:   11 LMDGLNFTPQSSVTTTQFKSEAANTVVTSLLITLIIANLVSIIDRLVFRTHSNIFSYRSFARSYFFLNSDDPLRIWFWMRGQYGFWNAAHDFAPSQYG----------MWKRFLVVPICTRIGVLVITFGSNALSIPSEKRLNACCLGDYTAVQGDIAQSPDVQGQKWDDVSNMTTNLESSSTPGMVA---------------ALYVKSKGMVFA------VIASGPTVQ----TIASYVGW-RTEKGNIYHSLMRRWNGQQYCKAIIAGLNFSLNETCNISKVFDMDTGEAGVYMGTLECSFIANNILNG---VSGFIRESLRFQRQKETALRT-LVRREGVLDTQQVCAVDVTVSRPLINIILLLIALVTAFFLNILVERIISKSANAMDAAFHLVRKVLGHDTGANPLQISTRRGNVRTVALNKFVCADGVSAHFGFLQGQGEDVVQEFDTGKTVGRCIQVTRRGPR 440
            L  G+++TP  +++T QF++E  NTV TSL++  ++ NL SII+RLVF +    F+YRSF R++ F++SDD  R+ +W +G+  + +  +   P   G          + +R L++P+C RI ++V +  S AL+IP +K  ++C   DY    G +  SP+   +    ++ +  ++  ++  G V+               AL+ +S  ++        ++ SG TV      + S+V W R   GNIY S +R+W+ +++      G++   N  C I    +      GV +G L C   A ++ +G   V+G +R+SL + + + T  R+ L   E  +  Q+ C V ++V RP++NI+ LL+ALV  + LN  V   +S   + MDA F LV++ LGHD  +NPL+ S     V  + L +F CADG SAH GFL+G+G+ VV+EF  GK V +C Q   +GPR
Sbjct:    3 LEGGVDYTPLLTISTIQFENEVVNTVATSLIVVFLLTNLGSIINRLVFISDKTQFNYRSFLRAFIFMHSDDITRLAYWWKGKNPYLSLLN---PGGSGGGRAQRMLNRVQRRRLLLPVCARILLVVSSIASIALTIPGKKTFSSCGRADYEPQMGSV--SPNFSEEPGGVLTRLCRDIPINTKRGDVSSKVSYCSTVLPLDTNALFEESTAVIAGYWEQGGLLISGYTVNGRSNLVLSFVEWQRGVNGNIYRSHIRQWSPERHLGVCAEGISRDRNRACTIQSTRNDSIQGVGVTLGLLSCDD-APDLQSGSSLVAGAVRDSLGWVKFRSTIQRSKLTGGEFRIPQQRECPVVISVERPVVNIVPLLVALVMMYTLNYAVNETVSHKGDIMDALFLLVKETLGHDCTSNPLEDSGGEKEVDVLQLQRFECADGRSAHIGFLRGRGDRVVEEFSDGKLVHQCYQTRAQGPR 466          
BLAST of Gvermi12665.t1 vs. uniprot
Match: A0A2V3II47_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II47_9FLOR)

HSP 1 Score: 196 bits (497), Expect = 2.920e-54
Identity = 131/444 (29.50%), Postives = 219/444 (49.32%), Query Frame = 0
Query:    3 ASFGDTTRLMDGLNFTPQSSVTTTQFKSEAANTVVTSLLITLIIANLVSIIDRLVFRTHSNIFSYRSFARSYFFLNSDDPLRIWFWMRGQYGFW--NAAHDFAPSQYGMWKRFLVVPICTRIGVLVITFGSNALSIPSEKRLNACCLGDYTAVQGDIAQSPDVQGQKWDDVSNMTTNLESSSTPGMVAALYVKSKGMVFAVIASGPTVQTIASYVGWRTEKGNIYHSLMRRWNGQQYCKAIIAGLNFSLNETCNISKVFDMDTGEAGVYMGTLECSFIANNILNGVSGFIRESLRFQRQKETALR--TLVRREGVLDTQQVCAVDVTVSRPLINIILLLIALVTAFFLNILVERIISKSANAMDAAFHLVRKVLGHDTGANPLQISTRRGNVRTVALNKFVCADGVSAHFGFLQGQGEDVVQEFDTGKTVGRCIQVTRRGPRFV 442
            +S  D   + +GL F P  +++T QF S+  N++V +L+ T+IIAN  SI+++LV  +  ++FS+ S+ R++ F NSDDP   +  +RG+YGF   N +H    +Q  + K+ L+VP+  R                                              + D + + +  E    PG++ A      G +F+V+ S   V  +   V W    G+++HS +  +    +   +   +      TC I +V  +     GV+M +L+C+F      + +   + +SL FQ Q+E ALR         V+D++  CA ++T++RPL+N+ILL+I  V AF +N     ++S  A+     FH+VR++LGHDT ANPLQ    +   + V + +FVC +  SAH  F++G G+ VVQ  +  + V  C Q+   G R V
Sbjct:   16 SSISDIMSIEEGLKFNPNLTLSTIQFSSDNLNSIVAALITTIIIANPQSIVNKLVAVSKQDVFSFNSYRRAFVFANSDDPSLGFSCLRGRYGFGFGNGSH----TQLKLRKKLLIVPLFAR----------------------------------------------YSDFAKVVSKTEELRVPGLLMAGQDLKIGALFSVLVSCKKVVVLGFGVKWAMPNGDVFHSKVSNYESYVHLGVLADAVRQPTKSTCEIRRVEPISDSANGVFMASLDCAFPPEKEFSTLLVAMTKSLHFQEQEEVALRHRRFANGSSVMDSRT-CAAEITINRPLMNLILLVIGAVAAFAVNKTTAALLSCRADVTHLGFHMVRELLGHDTRANPLQHGKEQEQDQRVTIRRFVCINEESAHVCFMEGDGDRVVQHLEDSRHVACCSQIACVGRRLV 408          
BLAST of Gvermi12665.t1 vs. uniprot
Match: R7QQN3_CHOCR (Uncharacterized protein n=3 Tax=Chondrus crispus TaxID=2769 RepID=R7QQN3_CHOCR)

HSP 1 Score: 170 bits (430), Expect = 1.880e-43
Identity = 130/461 (28.20%), Postives = 220/461 (47.72%), Query Frame = 0
Query:   11 LMDGLNFTPQSSVTTTQFKSEAANTVVTSLLITLIIANLVSIIDRLVFRTHSNIFSYRSFARSYFFLNSDDPLRIWFWMRGQYGFWNAAHDFAPSQYGMWKRFLVVPICTRIGVLVITFGSNALSIPSEKRLNACCLGDYTAVQGDIAQSPDVQGQKWD------DVSNMTT-------------------NLESSSTPGMVAALYVKSKGMVFAVIASGPTVQTIASYVGW---RTEKGN---IYHSLMRRWNGQQYCKAIIAGLNFSLNETCNISKVFDMDTGEAGVYMGT---LECSFIANNILNGVSGFIRESLRFQRQKETALRTLVRREGVLDTQQ---VCAVDVTVSRPLINIILLLIALVTAFFLNILVERIISKSANAMDAAFHLVRKVLGHDTGANPLQISTRRGNVRTVALNKFVCADGVSAHFGFLQGQGEDVVQEFDTGKTVGRCIQV 434
            L+  LN TP  S +T Q  S+  N ++ SLL   +I+N++S+  +L+F +    F Y S+ RS+ F+NSDDP+RI+ W+  +Y +         ++  +  R L++P+  R+ +LV    S A+SIPSEKRL+ C  GD+      I   P+V+    D      D+   TT                   N+  S   G +  +  +S  +  A+++   T  + A Y+ W   R ++ N   +  + + + +   + + I   L     + C      D    E    +     L+C F   +++  V  ++  SL   + +   +   +    + D  +    C +DV VSRP++NI+ L + LV    +N+LV    S+  NA D  FH++++ LGHDT +NPL+ ++ RG    + L K+ C  G +AH GF+   G+  VQ FD+   V  C QV
Sbjct:    3 LLQELNATPDFSFSTVQTSSDIINALIISLLTVFVISNILSVTSKLIFSSREKSFEYLSWVRSFIFVNSDDPIRIFSWIWHRYSYKEKGCTRYRNEIQL--RRLLLPLLARLFILVTAITSVAISIPSEKRLSGCEKGDFR-----IHMDPNVRKPAPDLNRVCADIPLTTTLGEVRSRVSYCSCLVDFGSNVPVSEGEGGIVTITTESGQLWTALVSKNKTAAS-AFYIQWVKNRRQRDNDKSLLFTNVEKIDSDDHLQVIANALRSETVQQCTAKGTSDKLPSEDNSLIAKAQILDCDFDPLSLIARVQAYVTGSLTLNKLRRGEMDNRLELNPLTDEVRETAACPIDVVVSRPIVNILPLALMLVLWGIINVLVSIYTSRRGNAFDMGFHIIKEALGHDTTSNPLEENSNRGEAMELPLRKWRCGAG-AAHEGFIGRDGDVPVQGFDSFTNVCGCTQV 454          
BLAST of Gvermi12665.t1 vs. uniprot
Match: A0A2V3II31_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II31_9FLOR)

HSP 1 Score: 159 bits (403), Expect = 6.670e-42
Identity = 91/275 (33.09%), Postives = 145/275 (52.73%), Query Frame = 0
Query:  170 DVSNMTTNLESSSTPGMVAALYVKSKGMVFAVIASGPTVQTIASYVGWRTEKGNIYHSLMRRWNGQQYCKAIIAGLNFSLNETCNISKVFDMDTGEAGVYMGTLECSFIANNILNGVSGFIRESLRFQRQKETALR--TLVRREGVLDTQQVCAVDVTVSRPLINIILLLIALVTAFFLNILVERIISKSANAMDAAFHLVRKVLGHDTGANPLQISTRRGNVRTVALNKFVCADGVSAHFGFLQGQGEDVVQEFDTGKTVGRCIQVTRRGPRFV 442
            D + + +  E    PG++ A+     G +F+V+ S   V  +   V W    G+++HS +  +    +   +   +    N TC I +V  +     GV M +L+C+F    +LN V   + +SL  Q Q+E ALR  T      V+D++   A ++T+ RPL+N+ILL+I  V AF +N     ++S  A+     FH+VR++LGHDT ANPLQ    +   + V + +FVC +G SAH GF++G G+ VVQ  +  + V  C Q+   G R V
Sbjct:   12 DFAKVVSKTEELRVPGLLMAVQDLKIGALFSVLVSSKKVVVLGFGVKWAMPNGDVFHSKVSNYESYVHLGVLADAVRQPNNSTCEIRRVEPISDSANGVVMASLDCAFPPEKVLNTVLVAVTKSLHLQEQEEVALRHRTFANGSSVMDSRT-WAAEITIKRPLMNLILLVIGAVAAFAVNKTTAALLSSRADVTHLGFHMVRELLGHDTRANPLQHGKEQEQDQRVTMQRFVCINGESAHVGFMEGDGDRVVQHLENIRHVACCSQIACEGRRLV 285          
BLAST of Gvermi12665.t1 vs. uniprot
Match: R7QI75_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QI75_CHOCR)

HSP 1 Score: 94.0 bits (232), Expect = 6.950e-18
Identity = 59/177 (33.33%), Postives = 101/177 (57.06%), Query Frame = 0
Query:   11 LMDGLNFTPQSSVTTTQFKSEAANTVVTSLLITLIIANLVSIIDRLVFRTHSNIFSYRSFARSYFFLNSDDPLRIWFWMRGQYGFWNAAHDFAPSQYGMWKRFLVVPICTRIGVLVITFGSNALSIPSEKRLNACCLGDYTAVQGDIAQSPDVQGQKWDDVSNMTTNLESSSTPGMV 187
            L+  LN TP  S +T Q  S+  N ++ SLL   +I+N++S+  +L+F +    F Y S+ RS+ F+NSDDP+RI+ W+  +Y +         ++  +  R L++P+  R+ +LV    S A+SIPSEKRL+ C  GD+      I   P+V+ +   D++ +  ++  ++T G V
Sbjct:    3 LLQELNATPDFSFSTVQTSSDIINALIISLLTVFVISNILSVTSKLIFSSREKSFEYLSWVRSFIFVNSDDPIRIFSWIWHRYSYKEKGCTRYRNEIQL--RRLLLPLLARLFILVTAITSVAISIPSEKRLSGCEKGDFR-----IHMDPNVR-KPAPDLNRVCADIPLTTTLGEV 171          
The following BLAST results are available for this feature:
BLAST of Gvermi12665.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3J0V9_9FLOR7.900e-6632.98Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3II47_9FLOR2.920e-5429.50Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QQN3_CHOCR1.880e-4328.20Uncharacterized protein n=3 Tax=Chondrus crispus T... [more]
A0A2V3II31_9FLOR6.670e-4233.09Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QI75_CHOCR6.950e-1833.33Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 330..350
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 351..454
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 113..134
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 135..329
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..35
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 36..58
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 59..112
NoneNo IPR availableTMHMMTMhelixcoord: 36..58
NoneNo IPR availableTMHMMTMhelixcoord: 331..350
NoneNo IPR availableTMHMMTMhelixcoord: 113..135
NoneNo IPR availableTMHMMTMhelixcoord: 196..218

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:217859..219319 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12665.t1Gvermi12665.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 217859..219319 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12665.t1 ID=Gvermi12665.t1|Name=Gvermi12665.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=455bp
MAASFGDTTRLMDGLNFTPQSSVTTTQFKSEAANTVVTSLLITLIIANLV
SIIDRLVFRTHSNIFSYRSFARSYFFLNSDDPLRIWFWMRGQYGFWNAAH
DFAPSQYGMWKRFLVVPICTRIGVLVITFGSNALSIPSEKRLNACCLGDY
TAVQGDIAQSPDVQGQKWDDVSNMTTNLESSSTPGMVAALYVKSKGMVFA
VIASGPTVQTIASYVGWRTEKGNIYHSLMRRWNGQQYCKAIIAGLNFSLN
ETCNISKVFDMDTGEAGVYMGTLECSFIANNILNGVSGFIRESLRFQRQK
ETALRTLVRREGVLDTQQVCAVDVTVSRPLINIILLLIALVTAFFLNILV
ERIISKSANAMDAAFHLVRKVLGHDTGANPLQISTRRGNVRTVALNKFVC
ADGVSAHFGFLQGQGEDVVQEFDTGKTVGRCIQVTRRGPRFVTEIPPKWK
EMKM*
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