Gvermi12664.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12664.t1
Unique NameGvermi12664.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length489
Homology
BLAST of Gvermi12664.t1 vs. uniprot
Match: A0A2V3J0V9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0V9_9FLOR)

HSP 1 Score: 264 bits (675), Expect = 2.730e-79
Identity = 174/471 (36.94%), Postives = 254/471 (53.93%), Query Frame = 0
Query:   15 GLDFTPGFTLSTIQFGNEALNTITTSLLTALIIANLLSIINRLILLTRPDVFSYSSFARSHVFQNSDDPLRIWSWMRGWYDFRA------HGPRATSPMHYRISKRLLLVPLCARIAVLVVTIGSIALALPYEKRLDACSRGDYALTQEDVVARPIVRAQGLL-RVCYPIPVKSKLGTVRSTASYCSFSVSPGDVNQMANLVKTLENTSMDGLVAAGYFPNTGVMLSIIASGQLFQVSASFIEW-RTENGDFYHSLLSSWDGQRFIEAITVGLSFALNETCKSVGITEQKDSDFEFSAGFVNCSFNANL--ALRYVTASVRESMRFRKQKQTALRVLDKGDEMSEARQT-CPVDVTVQRPMINIVPLLVGLTLAFCLNVTVGVTVSHRGNAMDAAFHLVREVLGHDTGANPLQVSARGDDIENVALRNRVCADGISGHKGFMHGQGDTVVEEFDSRQTVGRCMQVACRGLR 474
            G+D+TP  T+STIQF NE +NT+ TSL+   ++ NL SIINRL+ ++    F+Y SF R+ +F +SDD  R+  W +G   + +       G      M  R+ +R LL+P+CARI ++V +I SIAL +P +K   +C R DY      V         G+L R+C  IP+ +K G V S  SYCS +V P D N +       E+T+    V AGY+   G+++S         +  SF+EW R  NG+ Y S +  W  +R +     G+S   N  C               + G ++C    +L      V  +VR+S+ + K + T  R    G E    +Q  CPV ++V+RP++NIVPLLV L + + LN  V  TVSH+G+ MDA F LV+E LGHD  +NPL+ S    +++ + L+   CADG S H GF+ G+GD VVEEF   + V +C Q   +G R
Sbjct:    6 GVDYTPLLTISTIQFENEVVNTVATSLIVVFLLTNLGSIINRLVFISDKTQFNYRSFLRAFIFMHSDDITRLAYWWKGKNPYLSLLNPGGSGGGRAQRMLNRVQRRRLLLPVCARILLVVSSIASIALTIPGKKTFSSCGRADYEPQMGSVSPNFSEEPGGVLTRLCRDIPINTKRGDVSSKVSYCS-TVLPLDTNALFE-----ESTA----VIAGYWEQGGLLISGYTVNGRSNLVLSFVEWQRGVNGNIYRSHIRQWSPERHLGVCAEGISRDRNRACTIQSTRNDSIQGVGVTLGLLSCDDAPDLQSGSSLVAGAVRDSLGWVKFRSTIQRSKLTGGEFRIPQQRECPVVISVERPVVNIVPLLVALVMMYTLNYAVNETVSHKGDIMDALFLLVKETLGHDCTSNPLEDSGGEKEVDVLQLQRFECADGRSAHIGFLRGRGDRVVEEFSDGKLVHQCYQTRAQGPR 466          
BLAST of Gvermi12664.t1 vs. uniprot
Match: R7QQN3_CHOCR (Uncharacterized protein n=3 Tax=Chondrus crispus TaxID=2769 RepID=R7QQN3_CHOCR)

HSP 1 Score: 225 bits (574), Expect = 9.120e-64
Identity = 157/472 (33.26%), Postives = 244/472 (51.69%), Query Frame = 0
Query:   12 LLDGLDFTPGFTLSTIQFGNEALNTITTSLLTALIIANLLSIINRLILLTRPDVFSYSSFARSHVFQNSDDPLRIWSWMRGWYDFRAHGPRATSPMHYRISKRLLLVPLCARIAVLVVTIGSIALALPYEKRLDACSRGDYALTQEDVVARPIVRAQGLLRVCYPIPVKSKLGTVRSTASYCSFSVSPGD---VNQMANLVKTLENTSMDGLVAAGYFPNTGVMLSIIASGQLFQVSASFIEW------RTENGDFYHSLLSSWDGQRFIEAITVGLSFALNETCKSVGITEQ---KDSDFEFSAGFVNCSFNANLALRYVTASVRESMRFRKQKQTAL-RVLDKGDEMSEARQT--CPVDVTVQRPMINIVPLLVGLTLAFCLNVTVGVTVSHRGNAMDAAFHLVREVLGHDTGANPLQVSARGDDIENVALRNRVCADGISGHKGFMHGQGDTVVEEFDSRQTVGRCMQV 468
            LL  L+ TP F+ ST+Q  ++ +N +  SLLT  +I+N+LS+ ++LI  +R   F Y S+ RS +F NSDDP+RI+SW+   Y ++  G    +     I  R LL+PL AR+ +LV  I S+A+++P EKRL  C +GD+ +  +  V +P   A  L RVC  IP+ + LG VRS  SYCS  V  G    V++    + T+   S             G + + + S      SA +I+W      R  +     + +   D    ++ I   L     + C + G +++   +D+     A  ++C F+    +  V A V  S+   K ++  +   L+      E R+T  CP+DV V RP++NI+PL + L L   +NV V +  S RGNA D  FH+++E LGHDT +NPL+ ++   +   + LR   C  G + H+GF+   GD  V+ FDS   V  C QV
Sbjct:    3 LLQELNATPDFSFSTVQTSSDIINALIISLLTVFVISNILSVTSKLIFSSREKSFEYLSWVRSFIFVNSDDPIRIFSWIWHRYSYKEKG---CTRYRNEIQLRRLLLPLLARLFILVTAITSVAISIPSEKRLSGCEKGDFRIHMDPNVRKP---APDLNRVCADIPLTTTLGEVRSRVSYCSCLVDFGSNVPVSEGEGGIVTITTES-------------GQLWTALVSKNKTAASAFYIQWVKNRRQRDNDKSLLFTNVEKIDSDDHLQVIANALRSETVQQCTAKGTSDKLPSEDNSLIAKAQILDCDFDPLSLIARVQAYVTGSLTLNKLRRGEMDNRLELNPLTDEVRETAACPIDVVVSRPIVNILPLALMLVLWGIINVLVSIYTSRRGNAFDMGFHIIKEALGHDTTSNPLEENSNRGEAMELPLRKWRCGAGAA-HEGFIGRDGDVPVQGFDSFTNVCGCTQV 454          
BLAST of Gvermi12664.t1 vs. uniprot
Match: A0A2V3II47_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II47_9FLOR)

HSP 1 Score: 189 bits (481), Expect = 1.400e-51
Identity = 135/463 (29.16%), Postives = 214/463 (46.22%), Query Frame = 0
Query:   14 DGLDFTPGFTLSTIQFGNEALNTITTSLLTALIIANLLSIINRLILLTRPDVFSYSSFARSHVFQNSDDPLRIWSWMRGWYDFRAHGPRATSPMHYRISKRLLLVPLCARIAVLVVTIGSIALALPYEKRLDACSRGDYALTQEDVVARPIVRAQGLLRVCYPIPVKSKLGTVRSTASYCSFSVSPGDVNQMANLVKTLENTSMDGLVAAGYFPNTGVMLSIIASGQLFQVSASFIEWRTENGDFYHSLLSSWDGQRFIEAITVGLSFALNETCKSVGITEQKDSDFEFSAGFVNCSFNANLALRYVTASVRESMRFRKQKQTALRV--LDKGDEMSEARQTCPVDVTVQRPMINIVPLLVGLTLAFCLNVTVGVTVSHRGNAMDAAFHLVREVLGHDTGANPLQVSARGDDIENVALRNRVCADGISGHKGFMHGQGDTVVEEFDSRQTVGRCMQVACRGLR 474
            +GL F P  TLSTIQF ++ LN+I  +L+T +IIAN  SI+N+L+ +++ DVFS++S+ R+ VF NSDDP   +S +RG Y F   G    S    ++ K+LL+VPL AR                                                                    Y  F          A +V   E   + GL+ AG     G + S++ S +   V    ++W   NGD +HS +S+++    +  +   +      TC+   +    DS        ++C+F        +  ++ +S+ F++Q++ ALR      G  + ++R TC  ++T+ RP++N++ L++G   AF +N T    +S R +     FH+VRE+LGHDT ANPLQ     +  + V +R  VC +  S H  FM G GD VV+  +  + V  C Q+AC G R
Sbjct:   26 EGLKFNPNLTLSTIQFSSDNLNSIVAALITTIIIANPQSIVNKLVAVSKQDVFSFNSYRRAFVFANSDDPSLGFSCLRGRYGF---GFGNGSHTQLKLRKKLLIVPLFAR--------------------------------------------------------------------YSDF----------AKVVSKTEELRVPGLLMAGQDLKIGALFSVLVSCKKVVVLGFGVKWAMPNGDVFHSKVSNYESYVHLGVLADAVRQPTKSTCEIRRVEPISDSANGVFMASLDCAFPPEKEFSTLLVAMTKSLHFQEQEEVALRHRRFANGSSVMDSR-TCAAEITINRPLMNLILLVIGAVAAFAVNKTTAALLSCRADVTHLGFHMVRELLGHDTRANPLQHGKEQEQDQRVTIRRFVCINEESAHVCFMEGDGDRVVQHLEDSRHVACCSQIACVGRR 406          
BLAST of Gvermi12664.t1 vs. uniprot
Match: A0A2V3II31_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II31_9FLOR)

HSP 1 Score: 147 bits (370), Expect = 7.170e-37
Identity = 87/284 (30.63%), Postives = 146/284 (51.41%), Query Frame = 0
Query:  193 CSFSVSPGDVNQMANLVKTLENTSMDGLVAAGYFPNTGVMLSIIASGQLFQVSASFIEWRTENGDFYHSLLSSWDGQRFIEAITVGLSFALNETCKSVGITEQKDSDFEFSAGFVNCSFNANLALRYVTASVRESMRFRKQKQTALR--VLDKGDEMSEARQTCPVDVTVQRPMINIVPLLVGLTLAFCLNVTVGVTVSHRGNAMDAAFHLVREVLGHDTGANPLQVSARGDDIENVALRNRVCADGISGHKGFMHGQGDTVVEEFDSRQTVGRCMQVACRGLR 474
            CSF +   D +  A +V   E   + GL+ A      G + S++ S +   V    ++W   NGD +HS +S+++    +  +   +    N TC+   +    DS        ++C+F     L  V  +V +S+  ++Q++ ALR      G  + ++R T   ++T++RP++N++ L++G   AF +N T    +S R +     FH+VRE+LGHDT ANPLQ     +  + V ++  VC +G S H GFM G GD VV+  ++ + V  C Q+AC G R
Sbjct:    2 CSFLLPIID-SDFAKVVSKTEELRVPGLLMAVQDLKIGALFSVLVSSKKVVVLGFGVKWAMPNGDVFHSKVSNYESYVHLGVLADAVRQPNNSTCEIRRVEPISDSANGVVMASLDCAFPPEKVLNTVLVAVTKSLHLQEQEEVALRHRTFANGSSVMDSR-TWAAEITIKRPLMNLILLVIGAVAAFAVNKTTAALLSSRADVTHLGFHMVRELLGHDTRANPLQHGKEQEQDQRVTMQRFVCINGESAHVGFMEGDGDRVVQHLENIRHVACCSQIACEGRR 283          
BLAST of Gvermi12664.t1 vs. uniprot
Match: R7QI75_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QI75_CHOCR)

HSP 1 Score: 135 bits (339), Expect = 1.630e-32
Identity = 95/297 (31.99%), Postives = 151/297 (50.84%), Query Frame = 0
Query:   12 LLDGLDFTPGFTLSTIQFGNEALNTITTSLLTALIIANLLSIINRLILLTRPDVFSYSSFARSHVFQNSDDPLRIWSWMRGWYDFRAHGPRATSPMHYRISKRLLLVPLCARIAVLVVTIGSIALALPYEKRLDACSRGDYALTQEDVVARPIVRAQGLLRVCYPIPVKSKLGTVRSTASYCSFSVSPGD---VNQMANLVKTLENTSMDGLVAAGYFPNTGVMLSIIASGQLFQVSASFIEW------RTENGDFYHSLLSSWDGQRFIEAITVGLSFALNETCKSVGITEQKDSD 299
            LL  L+ TP F+ ST+Q  ++ +N +  SLLT  +I+N+LS+ ++LI  +R   F Y S+ RS +F NSDDP+RI+SW+   Y ++  G    +     I  R LL+PL AR+ +LV  I S+A+++P EKRL  C +GD+ +  +  V +P   A  L RVC  IP+ + LG VRS  SYCS  V  G    V++    + T+   S             G + + + S      SA +I+W      R  +     + +   D    ++ I   L     + C + G +++  S+
Sbjct:    3 LLQELNATPDFSFSTVQTSSDIINALIISLLTVFVISNILSVTSKLIFSSREKSFEYLSWVRSFIFVNSDDPIRIFSWIWHRYSYKEKG---CTRYRNEIQLRRLLLPLLARLFILVTAITSVAISIPSEKRLSGCEKGDFRIHMDPNVRKP---APDLNRVCADIPLTTTLGEVRSRVSYCSCLVDFGSNVPVSEGEGGIVTITTES-------------GQLWTALVSKNNTAASAFYIQWVKNRRQRDNDKSLLFTNVEKIDSDDHLQVIANALRSETVQQCTAKGTSDKLPSE 280          
The following BLAST results are available for this feature:
BLAST of Gvermi12664.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3J0V9_9FLOR2.730e-7936.94Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QQN3_CHOCR9.120e-6433.26Uncharacterized protein n=3 Tax=Chondrus crispus T... [more]
A0A2V3II47_9FLOR1.400e-5129.16Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3II31_9FLOR7.170e-3730.63Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QI75_CHOCR1.630e-3231.99Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..32
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 139..488
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 33..54
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 55..114
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 115..138
NoneNo IPR availableTMHMMTMhelixcoord: 37..59
NoneNo IPR availableTMHMMTMhelixcoord: 115..137

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:213903..215369 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12664.t1Gvermi12664.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 213903..215369 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12664.t1 ID=Gvermi12664.t1|Name=Gvermi12664.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=489bp
MDASNAKTTTLLLDGLDFTPGFTLSTIQFGNEALNTITTSLLTALIIANL
LSIINRLILLTRPDVFSYSSFARSHVFQNSDDPLRIWSWMRGWYDFRAHG
PRATSPMHYRISKRLLLVPLCARIAVLVVTIGSIALALPYEKRLDACSRG
DYALTQEDVVARPIVRAQGLLRVCYPIPVKSKLGTVRSTASYCSFSVSPG
DVNQMANLVKTLENTSMDGLVAAGYFPNTGVMLSIIASGQLFQVSASFIE
WRTENGDFYHSLLSSWDGQRFIEAITVGLSFALNETCKSVGITEQKDSDF
EFSAGFVNCSFNANLALRYVTASVRESMRFRKQKQTALRVLDKGDEMSEA
RQTCPVDVTVQRPMINIVPLLVGLTLAFCLNVTVGVTVSHRGNAMDAAFH
LVREVLGHDTGANPLQVSARGDDIENVALRNRVCADGISGHKGFMHGQGD
TVVEEFDSRQTVGRCMQVACRGLRNMNEIVSEKGGNAV*
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