Gvermi12656.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12656.t1
Unique NameGvermi12656.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length330
Homology
BLAST of Gvermi12656.t1 vs. uniprot
Match: R7QEV6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEV6_CHOCR)

HSP 1 Score: 320 bits (821), Expect = 1.490e-104
Identity = 152/266 (57.14%), Postives = 187/266 (70.30%), Query Frame = 0
Query:   27 LSAIEGEYPYSNHGSSQNPARVYRRGEQTRIKYQRNNHAPGGFIRLTLVTPDQMMNKEVHKRNAFHYSCWGAKPVIAAEDELNKDRFGFTMIGSDGEQHSVDKGYYVMDVTIPECVPDGDYVMGWVWYGGTGGNVETNEPQEPVPWGYFGDYWSCSFVRIEGGAPLAPSCGPVFVNDMSQFSQDGCMSANDEPGICTYEPCKVDGYYQKPKSFKNAGQPPPITPENFGVSYDKSVESNAPKETPDDIDLTEAGNSSANMSYITPSP 292
            + AIEG Y  SN  S  NPA VY+RG+  R+KY RNNH PGGFIRLTLV P++MM+K  H +NAF+Y+CWGA P  AA +E+  D+FGF+ +GSDGEQHS  KGYYVMDV IP  VPDG YV+GWVWYGG GG+ E N  QEP P+GYFGDYWSCS+V I GG+ L     PVF NDMS +S  GCMSAND PG+C+YEPC+VD  YQ P+ FK+   P  +TPE FG       ++  P ET   +D +    +S NM+ +TP+P
Sbjct:    1 MRAIEGGY--SNFDSPDNPAAVYQRGQTVRMKYTRNNHGPGGFIRLTLVAPEKMMDKNAHAKNAFYYTCWGANPQAAAANEMEADQFGFSFVGSDGEQHSHPKGYYVMDVKIPSVVPDGKYVLGWVWYGGGGGSAEGNVQQEPTPYGYFGDYWSCSYVEISGGSALESRHTPVFNNDMSGYSDVGCMSANDAPGVCSYEPCRVDSEYQAPRPFKDGNVPEDLTPEQFGGVSPAGRDATPPAETVTPMDAS----ASENMT-LTPTP 259          
BLAST of Gvermi12656.t1 vs. uniprot
Match: A0A2V3IS62_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS62_9FLOR)

HSP 1 Score: 308 bits (790), Expect = 3.460e-100
Identity = 138/250 (55.20%), Postives = 173/250 (69.20%), Query Frame = 0
Query:    6 QTCRLGGEPQFGVLDCAGPCDLSAIEGEYPYSNHGSSQNPARVYRRGEQTRIKYQRNNHAPGGFIRLTLVTPDQMMNKEVHKRNAFHYSCWGAKPVIAAEDELNKDRFGFTMIGSDGEQHSVDKGYYVMDVTIPECVPDGDYVMGWVWYGGTGGNVETN-EPQEPVPWGYFGDYWSCSFVRIEGGAPLAPSCGPVFVNDMSQFSQDGCMSANDEPGICTYEPCKVDGYYQKPKSFKNAGQPPPITPENFG 254
            +TCRLGGE Q G+ +C GPCDL  I  +  Y+N  +  +PA  Y RG++  IKY RNNHAPGGFIR+T V P Q+M++  H RNAFHYSCWGA PV A  +EL KD FGFTM GSDG QH   KGYYV  +TIP  +PDGDYV+GW WYGGTGGN+++   PQ P  + YFGDY+SCSFV++ GG     +  P F+NDM+QFS  GCMS+ D  G C  EPC    ++++P+ F +   PPP+TP  FG
Sbjct:   37 KTCRLGGEAQHGIDNCRGPCDLRPIHAKRRYANFWNPAHPAATYSRGQRVTIKYTRNNHAPGGFIRMTFVRPSQIMDRNAHARNAFHYSCWGAHPVRARPNELGKDHFGFTMTGSDGAQHGFGKGYYVTHITIPTVLPDGDYVLGWAWYGGTGGNLKSGTSPQYPGKYSYFGDYYSCSFVKVRGGE-YTQTYKPKFINDMAQFSNAGCMSSTDNLGNCAREPCHKPAFFRRPRQFADGRHPPPLTPALFG 285          
BLAST of Gvermi12656.t1 vs. uniprot
Match: A0A2V3J1Z2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1Z2_9FLOR)

HSP 1 Score: 308 bits (789), Expect = 3.800e-100
Identity = 141/256 (55.08%), Postives = 181/256 (70.70%), Query Frame = 0
Query:    8 CRLGGEPQFGVLDCAGPCDLSAIEGEYPYSNHGSSQNPARVYRRGEQTRIKYQRNNHAPGGFIRLTLVTPDQMMNKEVHKRNAFHYSCWGAKPVIAAEDELNKDRFGFTMIGSDGEQHSVDKGYYVMDVTIPECVPDGDYVMGWVWYGGTGG-NVETNEPQ--EPVPWGYFGDYWSCSFVRIEGGAPLAPSCGPVFVNDMSQFSQDGCMSANDEPGICTYEPCKVDGYYQKPKSFKNAGQPPPITPENFGVSYDKS 260
            CR+GGE + G+ +C GPCDL AI+G Y  +NH S  NP+ VY RG++  +KY RNNH PGGFIRLT+V    MM+K VH+RNAFHYSCWGA P  A  DEL  D FG++ +G+DGE+H   +GYYV +V+IP+ +PDGDYV+GWVW+GG G   V  N PQ  +P P GY+ D WSC++VRIEGG  L  +  P F ND+SQ++ +GC++AND PGICT EPC   G +QKP++FK    P P+TP NF  S   S
Sbjct:   19 CRVGGEAKSGIDNCHGPCDLRAIQGGY--ANHASPDNPSAVYSRGQRITVKYTRNNHGPGGFIRLTIVPLGSMMDKAVHERNAFHYSCWGANPQQAGPDELQTDHFGYSYVGNDGEEHPYGQGYYVANVSIPKVIPDGDYVLGWVWFGGIGSVPVLGNYPQPPQPSPMGYYADQWSCAYVRIEGGLALESTYYPAFKNDISQYNPEGCLAANDSPGICTVEPCYTPGIFQKPRNFKAGSYPSPLTP-NFYASVSPS 271          
BLAST of Gvermi12656.t1 vs. uniprot
Match: A0A2V3IUR8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUR8_9FLOR)

HSP 1 Score: 302 bits (773), Expect = 2.090e-99
Identity = 135/232 (58.19%), Postives = 168/232 (72.41%), Query Frame = 0
Query:   23 GPCDLSAIEGEYPYSNHGSSQNPARVYRRGEQTRIKYQRNNHAPGGFIRLTLVTPDQMMNKEVHKRNAFHYSCWGAKPVIAAEDELNKDRFGFTMIGSDGEQHSVDKGYYVMDVTIPECVPDGDYVMGWVWYGGTG-GNVETNEPQEPVPWGYFGDYWSCSFVRIEGGAPLAPSCGPVFVNDMSQFSQDGCMSANDEPGICTYEPCKVDGYYQKPKSFKNAGQPPPITPENF 253
            GPC L A +G Y  SN GS+ NPAR Y+RG+Q  +KY RNNH PGGFIRL+LVT    M+K VH RNAFHYSCWGA    A  +EL+ DRFGF  +G+DGE HS  + YY    T+P CVPDG Y++GWVW+GGT  G ++ N P+ P   G+F DYW+CS+VRI+GGA L  SC PVFVNDM QFS DGCM+ ND PG+C+YEPC  +G+Y+KP+ FK+  +PP +TP  F
Sbjct:   19 GPCQLKAAKGGY--SNFGSTINPAREYQRGQQFVVKYHRNNHGPGGFIRLSLVTLKDAMSKNVHTRNAFHYSCWGAFLKQAGPNELSTDRFGFNFVGNDGELHSAPRAYYQSFATVPRCVPDGVYILGWVWFGGTSLGPIKDNRPRRPDNRGFFSDYWACSYVRIKGGASLTSSCDPVFVNDMMQFSTDGCMAGNDSPGVCSYEPCISEGFYRKPQPFKDGSKPPSLTPSLF 248          
BLAST of Gvermi12656.t1 vs. uniprot
Match: R7QJR3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJR3_CHOCR)

HSP 1 Score: 153 bits (387), Expect = 6.910e-40
Identity = 90/224 (40.18%), Postives = 120/224 (53.57%), Query Frame = 0
Query:    8 CRLG-GEPQFGVLDCAGPCDLSAIEGEYPYSNHGSSQNPARVYRRGEQTRIKYQRNNHAPG--GFIRLTLVTPDQMMNKEVHKRNAFHYSCWGAKPVIAAEDELNKDRFGFTMIGSDGEQHSVDKGYYVMDVTIPECVPDGDYVMGWVWYGGTGGNVETNEPQEPVPWGYFGDYWSCSFVRIEGGAPLAPSCGPVFVNDMSQFSQDGCMSANDEPGICTYEPCK 228
            CR G G P+    DC GPC      G+       S   PA  +RRGEQ  + + RNNH  G  GF+RLTLV  D+MM+   HK+  F  SCW +   +      NK      + G+D E  +     Y   +T+P   PDG YV+GW WYGG  G+ + +         +FGDY+SCSFVRIEGGA L+ S  PVF   ++   +DGC+S+ D  G+C  EPC+
Sbjct:   35 CRAGNGRPR----DCYGPCPALDTYGD---PTGISPSRPAATWRRGEQKTVSWHRNNHGKGESGFVRLTLVPVDKMMDSRAHKKFTFQISCWSSG--LHKCKSRNKH-----VCGNDKEGMA-----YRAPITVPTAYPDGIYVLGWAWYGG--GDFKHDS--------FFGDYYSCSFVRIEGGARLSSSSKPVFAPGLNTKHRDGCLSSTDRVGVCKREPCR 229          
BLAST of Gvermi12656.t1 vs. uniprot
Match: A0A1X6P3E1_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P3E1_PORUM)

HSP 1 Score: 152 bits (385), Expect = 1.820e-38
Identity = 93/251 (37.05%), Postives = 123/251 (49.00%), Query Frame = 0
Query:    8 CRLGG---EPQFGVLDCAGPCDLSAIEGEYPYSNHGSSQNPARVYRRGEQTRIKYQRNNHAPGGFIRLTLVTPDQMMNKEVHKRNAFHYSCWGAKPVIAAEDELNKDRFGFTMIGSDGEQHSVDKGYYVMDVTIPECVPDGDYVMGWVWYGGTGGNVETNEPQEPVPWGYFGDYWSCSFVRIEGGAPLAPSCGPVFVNDMSQFSQDGCMSANDEPGICTYEPCKVDGYYQK--PKSFKNAGQPPPITPENF 253
            CR+GG    P      C GPC  S    +       SS+NPA +YRRG Q  +++ RNNH  GG +R  +V   +M +   H+RNAFH+SCW          + N+D +  T   +  +Q           + IP  +PDGDYV+GW WYGG  G V             FGDY+ CS+VR+EGG PLA    P F  D +      C+S  + PGIC  EPC    Y ++  P  F+    PPPI   NF
Sbjct:   53 CRIGGVGGTPGH----CPGPCPNSDFRPDT------SSKNPAAIYRRGSQYEVRWTRNNHE-GGIVRWAMVPVSEMWDMGSHERNAFHWSCWNINRFKCGAMDHNRDCYFDTSNMAFKDQ-----------LRIPNNLPDGDYVLGWTWYGGGEGPVGKQA--------IFGDYYDCSYVRVEGGNPLADKHIPTFSGDATGT----CLSTVNRPGICKREPCAPMPYVRRRVPVEFEGGRHPPPIYASNF 269          
BLAST of Gvermi12656.t1 vs. uniprot
Match: A0A1X6NZ75_PORUM (Rhodanese domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NZ75_PORUM)

HSP 1 Score: 149 bits (377), Expect = 4.920e-38
Identity = 94/264 (35.61%), Postives = 127/264 (48.11%), Query Frame = 0
Query:    8 CRLGGEPQFGVLDCAGPCDLSAIEGEYPYSNHGSSQNPARVYRRGEQTRIKYQRNNHAPGGFIRLTLVTPDQMMNKEVHKRNAFHYSCWGAKPVIAAEDELNKDRFGFTMIGSDGEQHSVDKGYYVMDVTIPECVPDGDYVMGWVWYGGTGGNVETNEPQEPVPWGYFGDYWSCSFVRIEGGAPLAPSCGPVFVNDMSQFSQDG-CMSANDEPGICTYEPCKVD----GYYQK---PKSFKNAGQPPPITPENFGVSYDKSVES 263
            CR+GG   +   DC GPC  +       Y       NP+  YRRGE   I+Y RNNH  GGF R TLV   QM +  VH  NAF Y+CW       + +   +  +           + +D   Y   +TIP   PDGDYV+G+ WYGG               +G FGDY+ C++VR+EGGAPL     P F +  S  + DG C +  ++ GIC  EPC       GYY +   P  F++ G PPPI  ++  V     V++
Sbjct:   49 CRVGGWDGWAN-DCPGPCPNA------DYREDAGPTNPSATYRRGEAYEIEYTRNNHF-GGFRRFTLVPVKQMWDARVHAANAFSYACWSRGEFECSMENQYRSCW-----------YDMDSKAYKDWITIPPVFPDGDYVLGYTWYGGG------------ERFGNFGDYYDCAYVRVEGGAPLVAEHTPTFTSGESNGANDGKCEATVNDLGICRVEPCIAPSGEKGYYTRRLRPAQFED-GDPPPIRMDSIAVDNRADVDA 280          
BLAST of Gvermi12656.t1 vs. uniprot
Match: A0A2V3IVU4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVU4_9FLOR)

HSP 1 Score: 147 bits (372), Expect = 8.380e-38
Identity = 86/230 (37.39%), Postives = 119/230 (51.74%), Query Frame = 0
Query:    6 QTCRLGGEPQFGVLDCAGPCDLSAIEGEYPYSNHGSSQNPARVYRRGEQTRIKYQRNNHAPGGFIRLTLVTPDQMMNKEVHKRNAFHYSCWGAKPVIAAEDELNKDRFGFTMIGSDGEQHSVDKGYYVMDVTIPECVPDGDYVMGWVWYGGTGGNVETNEPQEPVPWGYFGDYWSCSFVRIEGGAPLAPSCGPVFVNDMSQFSQDGCMSANDEPGICTYEPCKVDGYYQK 235
            +TCR+GG P +    C GPC       +Y +     ++NPA  + RG +  + Y +NNH  GGF+RLTLV  D+MM  E H+  AFHYSCW ++       E ++D       G D +  +     Y   +T+P   PDG YV+GW WYGG  G+            G +GDY+ CS+VRI+GG PL  +   +FV        DGC +A D  G+C  EPC  D +  K
Sbjct:   30 ETCRIGGNPGWESY-CGGPCP------DYNFRYDMRAENPAATWERGSRVTVHYSKNNHV-GGFMRLTLVPLDEMMRTEAHEALAFHYSCWSSELYYCDNKEQHRD------CGYDRDNLA-----YKTTITVPTIYPDGVYVLGWSWYGGGEGH------------GDYGDYYDCSYVRIQGG-PLTDTYHAMFVPGPRY--PDGCQAAVDRLGMCPTEPCPQDFWGSK 225          
BLAST of Gvermi12656.t1 vs. uniprot
Match: A0A1X6NK98_PORUM (Uncharacterized protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NK98_PORUM)

HSP 1 Score: 147 bits (371), Expect = 2.700e-37
Identity = 91/252 (36.11%), Postives = 122/252 (48.41%), Query Frame = 0
Query:    8 CRLGGE-PQFGVLDCAGPCDLSAIEGEYPYSNHGSSQNPARVYRRGEQTRIKYQRNNHAPGGFIRLTLVTPDQMMNKEVHKRNAFHYSCWGAKPVI------AAEDELNKDRFGFTMIGSDGEQHSVDKGYYVMDVTIPECVPDGDYVMGWVWYGGTGGNVETNEPQEPVPWGYFGDYWSCSFVRIEGGAPLAPSCGPVFVNDMSQFSQDG-CMSANDEPGICTYEPCKVDGY---YQKPKSFKNAGQPPPI 248
            CRLGG+ P  G   C GPC       EY    H SS+ PA  + RG +    Y RN H   GF+R+TLV     M  + H R AFHY CWGA  +I      AA+ ++           +  E    D   +    T+P   PDGDY+ GWVWYGG G + + +         +F DYW CS+VRI+GG  L P+    FV    + + D  C+S+   PG+   EP  V+G     +KP  F    +PPP+
Sbjct:   56 CRLGGKGPHTGT--CRGPCGP-----EYAAVTHTSSEAPATTWARGSRQSYSYLRNGHRRSGFVRITLVPVGDKMRHDAHTRFAFHYGCWGAGALINCTGSAAAKGDI-----------ASAEYCGTDTAMFRHPFTVPTVYPDGDYIFGWVWYGGGGDDPDNHGSLIS----FFADYWQCSYVRIKGGMALTPNATAQFVTGPGEPTDDPRCLSSVSRPGVAGPEP--VNGRPLTLRKPDVF-TGDRPPPV 282          
BLAST of Gvermi12656.t1 vs. uniprot
Match: A0A2V3IQV8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQV8_9FLOR)

HSP 1 Score: 146 bits (368), Expect = 5.880e-36
Identity = 86/249 (34.54%), Postives = 122/249 (49.00%), Query Frame = 0
Query:    8 CRLGGEPQFGVLDCAGPCDLSAIEGEYPYSNHGSSQNPARVYRRGEQTRIKYQRNNHAPGGFIRLTLVTPDQMMNKEVHKRNAFHYSCWGAKPVIAAEDELNKDRFGFTMIGSDGEQHSVDKGYYVMDVTIPECVPDGDYVMGWVWYGGTGGNVETNEPQEPVPWGYFGDYWSCSFVRIEGGAPLAPSCGPVFVNDMSQFSQDGCMSANDEPGICTYEPCKVDGYYQK--PKSFKNAGQPPPITPENFG 254
            CR+GG   F + +C GPC        Y  +      NP  V++RG   R+ + RNNH  GGF+R +LV  ++  +K  H + AFHY+CW        + + ++D         D +  +  K  Y     IP   PDGDYV+GW WYGG             V +G+FGDY+ C++VR+ GG P+  S  P F        +DGC +  D+ GIC  EPC+     +K  P  FK+   P PI  E +G
Sbjct:   36 CRIGGTGGF-IGNCPGPCP------NYNIAADADPSNPTTVFQRGGYHRVVWTRNNHE-GGFVRWSLVPLNKRDSKHWHAKMAFHYNCWSVGRFTCNDFDFHRD------CHYDRQNEAYSKMLY-----IPPVFPDGDYVLGWTWYGGG------------VGYGHFGDYYDCAYVRVSGGEPVQESYVPTFSAGGGSTYEDGCEATVDDLGICWKEPCRPMRKTEKRVPAPFKDGKTPQPILSEWYG 253          
The following BLAST results are available for this feature:
BLAST of Gvermi12656.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
R7QEV6_CHOCR1.490e-10457.14Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IS62_9FLOR3.460e-10055.20Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J1Z2_9FLOR3.800e-10055.08Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IUR8_9FLOR2.090e-9958.19Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QJR3_CHOCR6.910e-4040.18Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6P3E1_PORUM1.820e-3837.05Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A1X6NZ75_PORUM4.920e-3835.61Rhodanese domain-containing protein n=1 Tax=Porphy... [more]
A0A2V3IVU4_9FLOR8.380e-3837.39Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6NK98_PORUM2.700e-3736.11Uncharacterized protein (Fragment) n=1 Tax=Porphyr... [more]
A0A2V3IQV8_9FLOR5.880e-3634.54Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 238..329
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 275..298

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:120259..121248 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12656.t1Gvermi12656.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 120259..121248 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12656.t1 ID=Gvermi12656.t1|Name=Gvermi12656.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=330bp
MHLLTQTCRLGGEPQFGVLDCAGPCDLSAIEGEYPYSNHGSSQNPARVYR
RGEQTRIKYQRNNHAPGGFIRLTLVTPDQMMNKEVHKRNAFHYSCWGAKP
VIAAEDELNKDRFGFTMIGSDGEQHSVDKGYYVMDVTIPECVPDGDYVMG
WVWYGGTGGNVETNEPQEPVPWGYFGDYWSCSFVRIEGGAPLAPSCGPVF
VNDMSQFSQDGCMSANDEPGICTYEPCKVDGYYQKPKSFKNAGQPPPITP
ENFGVSYDKSVESNAPKETPDDIDLTEAGNSSANMSYITPSPVSAEYDTL
PSPSLEIIETEPGDGYPEHSMEQDYTSFD*
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