Gvermi12655.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12655.t1
Unique NameGvermi12655.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length501
Homology
BLAST of Gvermi12655.t1 vs. uniprot
Match: A0A2V3J3J0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3J0_9FLOR)

HSP 1 Score: 270 bits (691), Expect = 3.020e-79
Identity = 222/669 (33.18%), Postives = 297/669 (44.39%), Query Frame = 0
Query:   31 SSTGSLSPLSAAVLPRTSVTLPQHS-VHPVSPTPTAMSDERPSLGPLAKIPLRPSMRPVLQLDLDAVAEQLSIFQGAAVTQEDLRNSFPIAKKQPQSPLQPSSI-PKSFASVYPSGTETPVIPLSVE---DDDFNDDREGQNLVLHFETVDEAHGLSDTRDSPNEMGDKVDASKGWAVSVPVSEPYEPPLQTWPTEPAEIMDEETSLLEHEPQGVDLAKHGDMVFQPDTTAVVQRQGNENDFEDQRVIVTVPETTSNGVNSGFIIPNYDSNENLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VRTFCGDFIAALSSLGAIVYLDSCKELRGRVSFFPMMTFISALSSITFSISSMILSGTNLSVTDHGVFGWLQTDRHILGLYLGGVVGFLGTVSCIASLKYLPSVVVSSVQTMIPVVGTTLAVLMRIENLPDIWTTLGGAVLFYGVLLIADATKRSEVIVVLNEHLTS 500
            SS G++SP    + P++S+T  QH+ +HP S  P +         PLA++P RPS+RP+LQ+D D VA++L+ FQGA+VT +DL+NS P      Q     SS  P    S+  SGT TP +P+SVE   +D+ +     Q +VL     +EA    D   S  +     D SKG+A+S PV+    P       +  + +DEE+ LL+H  QG++LA   ++    D+  +VQR G+++  EDQ V+V+VP   S G N+G +IPN+DS +NL                                                                                                                                                                                                                                    VR+ CGD IAA SSLGAIV+L+ CKELR R+  F MM  ISAL+S+TFS++SM + GT+ SVTDHG  GW+QT+R ILGLYLGGVVGFLGTV CIA+LKYLPSVVV SVQTM+PVVGT +AV+M  + LPD+ TTLGGA L YGVL+IADAT++SEV VVLN+H+ S
Sbjct:   42 SSYGAISPF---LTPQSSLTFAQHAQIHPSSYPPASPLTPNLPPTPLARVPSRPSLRPLLQIDFDQVAQELNRFQGASVTGQDLKNSIPAT----QGSFDVSSTAPTPRDSLTVSGTATPSVPMSVEVAHNDNASPYTTDQAMVLKIRAAEEALRSPDVSWSQLDSDVLPDTSKGYAMSFPVNPDPLPIDIRNGMDYQQQVDEESPLLDH--QGINLASSVELPS--DSAIIVQRHGDKHVVEDQEVVVSVPHAGSVGQNTGLLIPNFDSRDNLKEILMVVPPDQEESEAEPQRKLEETVSSTKEIARDTIDQISNMMPSLVDVESTVEVRGSTKNVTVAMNVKREVSLVGYLILAVALFSVASQGTAVKWLPSVDGMIAASWLMQCQTFLMVPFAVFQYLTLNEEERRQWNEPSTMRMILIASMSQVAWACGFFLAIDYTSLFHAWSLNNIHALTIVLIAVGSGMLRRKNARVVSSGELQGARIAIVGVILMQIPNLISLDVRSLCGDLIAATSSLGAIVFLNVCKELRQRIPLFLMMAPISALNSVTFSMASMAIGGTDFSVTDHGALGWMQTERLILGLYLGGVVGFLGTVCCIAALKYLPSVVVGSVQTMMPVVGTLVAVMMGTDRLPDVCTTLGGAALLYGVLVIADATRQSEVTVVLNDHIAS 699          
BLAST of Gvermi12655.t1 vs. uniprot
Match: A0A6G0X1X2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X1X2_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 6.630e-12
Identity = 51/154 (33.12%), Postives = 84/154 (54.55%), Query Frame = 0
Query:  339 GDFIAALSSLGAIVYLDSCKELRGRVSF-FPMMTFISALSSITFSISSMILSGTNLSVTDH---GVFGWLQTDRHILGLYLGGVVGFLGTVSCIASLKYLPSVVVSSVQTMIPVVGTTLAVLMRIENLPDIWTTLGGAVLFYGV-LLIADATKR 487
            GD +A L ++GA +YL + K +R +    F +  ++   S     +  ++L G  ++++     G+FGWL + R  L LYL GV  F+G +  I  LKY   +VVS V  M PV+ + L + + + N+P I T +G  V+  G  ++I  +TKR
Sbjct:  230 GDIVAFLGAIGAAIYLTNAKAVRSQPGMNFMVFMWLHMCSVAVILLLILLLLGETITLSADPMIGLFGWLDSTRLPLELYLVGVCDFVGGMGYIRVLKYFEPIVVSIVMLMEPVLASLLGIAVGVSNMPGIMTLVGSFVVIIGTAMVIKSSTKR 383          
BLAST of Gvermi12655.t1 vs. uniprot
Match: A0A2E7FZ15_9EURY (Uncharacterized protein n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E7FZ15_9EURY)

HSP 1 Score: 73.2 bits (178), Expect = 1.600e-10
Identity = 48/156 (30.77%), Postives = 83/156 (53.21%), Query Frame = 0
Query:  336 TFCGDFIAALSSLGAIVYLDSCKELRGRVSFFPMMTF---ISALSSITFSISSMILSGTNLS--VTDHGVFGWLQTDRHILGLYLGGVVGFLGTVSCIASLKYLPSVVVSSVQTMIPVVGTTLAVLMRIENLPDIWTTLGGAVLFYGVLLIADATK 486
            T  GD  A L ++  + YL + + LRG  +  P+  +   ++++S++  +I S++  GT+++  V     FGW+ +   +L LYL    G LG     ASLK+LP +V+S    + P++G  L  L+ ++ +P +WT LGG  +  G  L    T 
Sbjct:  151 TLIGDLAAFLGAIAIVGYLAAGRNLRGERNM-PLFLYAFPVTSISAVFLTIHSVVSEGTSITSAVAIDWTFGWMDSAWILLVLYLAIGPGLLGHTGINASLKWLPPLVISVSVVLEPILGGILGWLIGVQEIPGVWTWLGGPFMIIGTALAIYGTN 305          
BLAST of Gvermi12655.t1 vs. uniprot
Match: A0A2V4DBR5_9EURY (EamA domain-containing protein n=4 Tax=Archaea TaxID=2157 RepID=A0A2V4DBR5_9EURY)

HSP 1 Score: 65.1 bits (157), Expect = 7.330e-8
Identity = 42/155 (27.10%), Postives = 78/155 (50.32%), Query Frame = 0
Query:  336 TFCGDFIAALSSLGAIVYLDSCKELRGRVSFFPMMTF-ISALSSITFSISSMILSGT--NLSVTDHGVFGWLQTDRHILGLYLGGVVGFLGTVSCIASLKYLPSVVVSSVQTMIPVVGTTLAVLMRIENLPDIWTTLGGAVLFYGVLLIADATKR 487
            TF GD  A   ++  + YL   + LR       +  F ++ +++I  + SSM+   +   ++  D   FGWL     +   YL    GF+G     A+L++LP++++S    M P++G  +   + +E +P +WT LGG ++  G +++  A  R
Sbjct:  158 TFIGDLAAFFGAVMVVGYLMIGRRLRSEGLPLHLYAFPVTVVAAILLTFSSMLFEASPIGMAAADLSTFGWLDAAWLLPIAYLAIGPGFVGHTGINAALRWLPTLLISVTLVMEPMLGAIIGWALGVEEIPGMWTWLGGPLMVAGTVMVTVAVAR 312          
BLAST of Gvermi12655.t1 vs. uniprot
Match: A0A2D7LAC9_9EURY (EamA domain-containing protein n=5 Tax=Archaea TaxID=2157 RepID=A0A2D7LAC9_9EURY)

HSP 1 Score: 60.5 bits (145), Expect = 2.300e-6
Identity = 37/144 (25.69%), Postives = 75/144 (52.08%), Query Frame = 0
Query:  339 GDFIAALSSLGAIVYLDSCKELRGRVSFFPMMTFISALSSITFSISSMILSGTNLSVTDH-GVFGWLQTDRHILGLYLGGVVGFLGTVSCIASLKYLPSVVVSSVQTMIPVVGTTLAVLMRIENLPDIWTTLGGAVLFYGVLLI 481
            GDF+A L ++  + YL   + +RG +  F     ++A+S++  +  ++   G    + +  G FGW+         YL    G  G     A L+++P + +S +  M PV+G+ +  ++ ++N+P +WT +GG ++  G+ L+
Sbjct:  159 GDFLAFLGAVTVVGYLVIGRMVRGWMPLFLYAFPVTAVSAVLLTGWAIYAEGLTFDLAEMTGAFGWVSAAWVGYVAYLALGPGLAGHTGINAVLRWIPPLTISMILIMEPVIGSVIGWVVGVDNVPGVWTLVGGLLMVAGLALV 302          
BLAST of Gvermi12655.t1 vs. uniprot
Match: A0A7S1D0J2_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D0J2_CYCTE)

HSP 1 Score: 59.3 bits (142), Expect = 5.490e-6
Identity = 46/152 (30.26%), Postives = 78/152 (51.32%), Query Frame = 0
Query:  336 TFCGDFIAALSSLGAIVYLDSCKELRGRVSFFPMMTFISALSSITFSISSMILSGTNLSVTDHGVFGWLQTDRHILGLYLGGVVGFLGTVSCIASLKYLPSVVVSSVQTMIPVVGTTLAVLMRIENLPDIWTTLGGAVLFYGVLLIADATKR 487
            TF GD +A L S    VYL   + LR  +  + + TF     + + S+S   L G N S++   VFG+L+       LYLG   G  G V     +K++  + +S+  T  P +G+ L  ++ ++ +P  +T LGGA+L  G+ +I +  ++
Sbjct:  153 TFEGDMVAFLGSATVAVYLVIGQHLRRWMPLW-IYTFTIIFVAYSTSLSLSFLLGENPSLSM--VFGFLRQPYLPYALYLGAGPGLGGHVMINFLIKFVSPLTISTAMTSEPFIGSILGYVVGLQEVPQFFTWLGGAILLLGLYIIVNGEEQ 301          
The following BLAST results are available for this feature:
BLAST of Gvermi12655.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3J3J0_9FLOR3.020e-7933.18Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A6G0X1X2_9STRA6.630e-1233.12Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A2E7FZ15_9EURY1.600e-1030.77Uncharacterized protein n=1 Tax=Euryarchaeota arch... [more]
A0A2V4DBR5_9EURY7.330e-827.10EamA domain-containing protein n=4 Tax=Archaea Tax... [more]
A0A2D7LAC9_9EURY2.300e-625.69EamA domain-containing protein n=5 Tax=Archaea Tax... [more]
A0A7S1D0J2_CYCTE5.490e-630.26Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 296..299
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..140
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..140
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..67
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 460..464
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 366..390
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 432..437
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 391..409
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 483..500
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 465..482
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 355..365
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 334..354
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..333
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 438..459
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 410..431
NoneNo IPR availableSUPERFAMILY103481Multidrug resistance efflux transporter EmrEcoord: 402..482
NoneNo IPR availableTMHMMTMhelixcoord: 366..388
NoneNo IPR availableTMHMMTMhelixcoord: 465..482
NoneNo IPR availableTMHMMTMhelixcoord: 437..459
NoneNo IPR availableTMHMMTMhelixcoord: 408..430
NoneNo IPR availableTMHMMTMhelixcoord: 332..354

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:117551..119053 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12655.t1Gvermi12655.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 117551..119053 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12655.t1 ID=Gvermi12655.t1|Name=Gvermi12655.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=501bp
MADGPNPGRSSSGQASQSLPVQQQAAEIHGSSTGSLSPLSAAVLPRTSVT
LPQHSVHPVSPTPTAMSDERPSLGPLAKIPLRPSMRPVLQLDLDAVAEQL
SIFQGAAVTQEDLRNSFPIAKKQPQSPLQPSSIPKSFASVYPSGTETPVI
PLSVEDDDFNDDREGQNLVLHFETVDEAHGLSDTRDSPNEMGDKVDASKG
WAVSVPVSEPYEPPLQTWPTEPAEIMDEETSLLEHEPQGVDLAKHGDMVF
QPDTTAVVQRQGNENDFEDQRVIVTVPETTSNGVNSGFIIPNYDSNENLX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRTFCGDFIAALSSLGA
IVYLDSCKELRGRVSFFPMMTFISALSSITFSISSMILSGTNLSVTDHGV
FGWLQTDRHILGLYLGGVVGFLGTVSCIASLKYLPSVVVSSVQTMIPVVG
TTLAVLMRIENLPDIWTTLGGAVLFYGVLLIADATKRSEVIVVLNEHLTS
*
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