Gvermi12511.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi12511.t1
Unique Name	Gvermi12511.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	495

Homology

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BLAST of Gvermi12511.t1 vs. uniprot
Match: A0A2V3II95_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II95_9FLOR)

HSP 1 Score: 620 bits (1599), Expect = 3.680e-218
Identity = 307/481 (63.83%), Postives = 386/481 (80.25%), Query Frame = 0

Query:    1 MSLNLREIERGIGIDLLRRPVVTSMLNAYLLRLFADAFLQPTEEDDDDHFDAYDDVRKGHEEVGCAKSPLSEKLAASSIFLLTHFIQLIGLAESLVWIVIGLLYKAIRLPRVYGFEKMVLDLSVLLFKPSVRYVKKTLRFQCRPGQKVPHLQLSRSGFGSMVITVVSSEESLTRDTRALLQMLRYLNSTTVAFWTDESVVMVGVNKNVERALCKLGSEPIKIDLGWHKDVIEGTNFKMEAVFTKEHLRVMESGIQSVGRRAVIVELCAQFETTNLELLVKSLSQFAAVCEAYERGLRMFNGKRVSIYAVGLALCIALIVFYDGLPGLLQPSVDVLPLAIGAFTLWMTLGKSAALGETEERTTYTPYNRENILLAYHGLARIEPDVRNVCWVPEVHREEHAEVDEHDTVDGSLSVLEAAVCLSIFEHFGHFVKWKGSRLLIDRFEVRSSGEKGLAHIVGVQRLRSLAALRLCEHAPVVRRLG 481
            M+L L EIERGIGIDLLRRPV+ + LNA+LL+LFADAFL   +E+++        V+    + G AKSPL+EKLAA+SIF L H + L+G AES+ W +I +++K ++LPRVY  EK++LDL V+  KPSVRYVKKT+RFQCRPGQK+P LQ +R GFG  VIT+VSS ES+TRDT ALL MLRY+N  T A+WTD+SV+++G+N+N+ERALC L SEP  IDLGWHKDVIE TN K+EAVFTKE+LR ++SGIQSVGRRAV+VE+ A+F T NLE LVKS+SQ+AAVCEA+ERG+R+FNGKR+SIYAVGL + +ALIVFY+GL GLL+PS DVL LA+GA+TLWMT+GKSAALGETEERT+ + YNREN+LLAYHGLA IE +V N+CWVPEVHR++H    + + VDGS+SVLEA + L+IFEHFGHFVKWKG RL +DR +V +  + G+AHIV V R+  L  L   +    V+RLG
Sbjct:    1 MALRLHEIERGIGIDLLRRPVLVAFLNAFLLQLFADAFLHHDDEEEEK-------VKYEAPKAGWAKSPLTEKLAATSIFFLAHLLMLVGFAESVGWALIAIVFKVLKLPRVYVLEKLLLDLRVMFLKPSVRYVKKTIRFQCRPGQKIPRLQTTRRGFGVFVITIVSSVESITRDTAALLHMLRYMNYPTYAYWTDDSVLLIGINRNIERALCNLASEPAVIDLGWHKDVIESTNLKVEAVFTKENLRRVDSGIQSVGRRAVVVEIAAEFTTLNLETLVKSMSQYAAVCEAHERGIRLFNGKRLSIYAVGLFVSLALIVFYEGLGGLLKPSADVLTLAVGAYTLWMTVGKSAALGETEERTSLSTYNRENVLLAYHGLAHIEENVINICWVPEVHRDDHESPLDAEAVDGSISVLEAGIFLNIFEHFGHFVKWKGPRLQLDRMKVVAGDDPGVAHIVSVDRMAHLNMLGYQKGETFVKRLG 474

The following BLAST results are available for this feature:

BLAST of Gvermi12511.t1 vs. uniprot

BLAST of Gvermi12511.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3II95_9FLOR	3.680e-218	63.83	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 79..104
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 304..321
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 105..303
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..78
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 327..348
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 349..494
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 322..326
None	No IPR available	TMHMM	TMhelix		coord: 81..103
None	No IPR available	TMHMM	TMhelix		coord: 304..321

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_3404	contig	ScGOVlb_3404:5947133..5948617 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi12511.t1	Gvermi12511.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_3404 5947133..5948617 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi12511.t1 ID=Gvermi12511.t1|Name=Gvermi12511.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=495bp
MSLNLREIERGIGIDLLRRPVVTSMLNAYLLRLFADAFLQPTEEDDDDHF
DAYDDVRKGHEEVGCAKSPLSEKLAASSIFLLTHFIQLIGLAESLVWIVI
GLLYKAIRLPRVYGFEKMVLDLSVLLFKPSVRYVKKTLRFQCRPGQKVPH
LQLSRSGFGSMVITVVSSEESLTRDTRALLQMLRYLNSTTVAFWTDESVV
MVGVNKNVERALCKLGSEPIKIDLGWHKDVIEGTNFKMEAVFTKEHLRVM
ESGIQSVGRRAVIVELCAQFETTNLELLVKSLSQFAAVCEAYERGLRMFN
GKRVSIYAVGLALCIALIVFYDGLPGLLQPSVDVLPLAIGAFTLWMTLGK
SAALGETEERTTYTPYNRENILLAYHGLARIEPDVRNVCWVPEVHREEHA
EVDEHDTVDGSLSVLEAAVCLSIFEHFGHFVKWKGSRLLIDRFEVRSSGE
KGLAHIVGVQRLRSLAALRLCEHAPVVRRLGAPPAENAEPDGAV*