Gvermi12502.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12502.t1
Unique NameGvermi12502.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length591
Homology
BLAST of Gvermi12502.t1 vs. uniprot
Match: A0A2V3IEM1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEM1_9FLOR)

HSP 1 Score: 181 bits (459), Expect = 5.850e-46
Identity = 224/589 (38.03%), Postives = 309/589 (52.46%), Query Frame = 0
Query:   12 ARALERAVRRHGDIDAMTDLGTMMVFEDV------FASQRMRGVQFLNRAIKQGRHPHAMYFLAKFFTDQQVNGAASLAAPLLERALRLDERPEILHRLGLLYLYGKGVRKDAAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLGLQYSEGTCVLKANASKARKWFMRSLNRCDDAAPRFNLALLMLDGDADE-DDVTQAIRLLEDSLEKEQHELTMLELADLY-VKRSV-DVERGVNLYEAAALRFDSGAARFKFVHNLLGCR---AATPDNRVRVHDFCLKDVQ-KNRNLGSLVLMAQVLWS--VSERKEALRILDIHQWTR--HGV-FSLMLRYDLSLHPGGRKRARALMETFDSRIEDVCFSDAVILSERECAA-DRLRALERFERDRKRRDVNVYSFVLP-FARRCRFDLPFHGGLECVSNAMRVFTCIADLACLNLASLLLETEGRQHE----CVGVLEGLMDGNLRLLGQLNCAYVLMNGVAGVQRDWESGMQMLRDAVSETNDVSARAMLGNALAQQKGASDEDVERG-WRLWKGVQEEADGEELRRLGRLV 575
            A+  ERA++R  D+DAM  LG M++          +     RGVQ L RA+KQ  +P A   LA  F D            LLE A R    P  LH L  +   G    KD   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        RL   Y EGT  L+ +   A KW+ RS++  +    ++ LA L+L+    E  D T+A  LLED+L +   E +++ LA++Y V R V ++ R   L E A   F S AA    VH L  C       P +  R    C + +   N +   +++MA +LWS  VS R +  R + + +     HG+ F+LMLRYD    P  RK A +    F       C+ +A++ SE+E    D ++A + F   R       Y   +P + R+    LP+HG   C +  +  F  +A++  LNLASLLL+   +  E     + +LE LM+  LR +  +N  YVL  GV G+ +D    ++ML   + ET DVSAR +L + LA++   S+ ++E   W L     E +D EEL++L RL+
Sbjct:   12 AKRYERAIKRFNDVDAMIQLGHMLLSGRHSSGAVGYKIDHCRGVQLLERAVKQADNPRAKALLALHFRDFGNKKQRRRVVSLLEDAFRQMGDPVSLHVLAKVLYDGDCGEKDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNESDIMHRLARLYHEGTVNLEPSFENAVKWYQRSIDVGEHCDSKYYLARLLLETPVGEYRDPTRAALLLEDALTQSYTERSLICLANVYTVHRQVANIPRAAYLLERAVCDFGSTAAT---VHLLNFCAFGFQGFPLDHQRAILICERHLSCTNPHRTVMMIMASILWSGSVSVRVDRERAIQVARQIENDHGIMFALMLRYDAPSRPADRKLAASYFTNFRH-----CYVNALLTSEQEDPRFDSVQAEQMFRLARGNLLGTDYLGWIPLYIRKSTLGLPYHGDERCFTKNVMRFCSVANITSLNLASLLLDRTSKSPEQCAEAITILECLMETELRDIAAVNLCYVLWYGVGGIAQDQPRALKMLVRFIGETRDVSARVLLASTLAERANESNWNLESSSWTLSAIRAEISDEEELQKLARLL 592          
BLAST of Gvermi12502.t1 vs. uniprot
Match: A0A2V3ITQ7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITQ7_9FLOR)

HSP 1 Score: 156 bits (395), Expect = 2.140e-37
Identity = 200/559 (35.78%), Postives = 295/559 (52.77%), Query Frame = 0
Query:   28 MTDLGTMMVFEDVFASQRMRGVQFLNRAIKQGRHPHAMYFLAKFFTDQQVNGAASLAAPLLERALRLDERPEILHRLGLLYLYGKGVRKDAAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLGLQYSEGTCVLKANASKARKWFMRSLNRCDDAAPRFNLALLMLDG-DADEDDVTQAIRLLEDSLEKEQHELTMLELADLYVK--RSVDVERGVNLYEAAALRFDSGAARFKFVHNLLGCRAATPDNRVRVHDFCLKDVQKNRNLGSLVLMAQVLWSVSER------------KEALRILDIHQWTRHGVFSLMLRYDLSLHPGGRKRARALMETFDSRIED---VCFSDAVILSE--RECAADRLRALERFERDRKRRDVNVYSFVLPFA-RRCRFDLPFHGGLECVSNAMRVFTCIADLACLNLASLLLE----TEGRQHECVGVLEGLMDGNLRLLGQLNCAYVLMNGVAGVQRDWESGMQMLRDAVSETNDVSARAMLGNALAQQKGASDEDVERGWRLWKGVQE 561
            M  L  ++++ + +  +  RG+Q L RAIKQ   P AMY LA+++ D         A  LLER+L   E P +LH L      G GVR++   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  LG+ +++G      NA +A KWF R++   +  + + NLA+++    D    D ++A  LLE+ +E+   +  +L+LA+LY      ++  R V L   A   F+S  ARF     +L      P  R        +  +K  ++GS++ ++++LWS +E             K+  R  DI  +    V + MLRY     P   K+A  + E    + +D   +    A++LSE      +D   A+E F        + ++   LP + R    DLP HG   C++ +++ +  +  +A LNLASLL+E    T     E V +LE L+D  +  L  LN  Y+L N V G+ +D E    +   A  E N++  + +L NAL++       D ++   LW+ V++
Sbjct:    1 MIALANLLMYSEDYRDEE-RGIQMLERAIKQAGSPLAMYRLARYYLDFGSRSQYHKAVALLERSLHQSEDPAVLHLLSFAVASGLGVRRNIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNALGVVFADGAPHFPPNARRAVKWFNRAIEVGNLPSAKHNLAVILTQTHDKVMPDPSRAALLLEEVVEETGKQGAILQLAELYSNWLSVLNYPRAVTLLTRAVHEFNSYPARFSLAR-MLAFGEGVPAQRATALGLFERHYEKVHDIGSMLNLSEMLWSGTEELPADMERSVSLCKQLCRKTDIGNY----VLASMLRYGAPTLPRNLKQAITICER--EKADDDHFIMLVHAILLSEDPESNDSDISHAIELFRALSVDTPLQMWWVWLPLSLRTSSVDLPIHGNEHCITESVKRYEEVNVIAKLNLASLLVEDRSPTLQDSEEAVQLLESLIDTRIGDLAALNLGYLLWNEVGGIPQDKERARALFERATEEDNNLVGKVLLANALSEGIDEEVSDADQVAELWRSVED 551          
BLAST of Gvermi12502.t1 vs. uniprot
Match: A0A2V3IUV8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUV8_9FLOR)

HSP 1 Score: 92.0 bits (227), Expect = 8.280e-16
Identity = 152/658 (23.10%), Postives = 241/658 (36.63%), Query Frame = 0
Query:   13 RALERAVRRHGDIDAMTDLGTMMVFEDVFASQRM-RGVQFLNRAIKQGRHPHAMYFLAKFFTDQQ------------------------VNGAASL--------------AAPLLERALRLDERPEILHRLGLLYLYGKGVRKDAAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLGLQYSEGTCVLKANASKARKWFMRSLNRCDDAAPRFNLALLMLDGDADEDDVTQAIRLLEDSLEKEQHELTMLELADLY--VKRSVDVERGVNLYEAAALRFDSGAARFKFVHNLL-GCRAATPD-----NRVRVHDFCLKD---------------------------------VQKNRNLGSLVLMA----QVLWSVSERKEALRILDIHQWTRHGVFSLMLRYDLSLHPGGRKRARALMETFDSRIEDVCFSDAVILSERECAADRLRALERFERDRKRRDVNVYSFV-LPFARRCR-FDLPFHGGLECVSNAMRVFTCIADLACLNLASLLLETEG----RQHECVGVLEGLMDGNLRLLGQLNCAYVLMNGVAGVQRDWESGMQMLRDAVSETNDVSARAMLGNALAQQKGASDEDVERGWRLWKGVQEE-----ADGEELRRLGRLV 575
            R  E A++   +  AM +L  MM+  +   ++   RGVQ L RAIKQ + P AM+ L  +  D                          + G AS               AA LL RALRL E P+ +  L  L +    ++ D A+                                                         LGL Y++G   ++ N  +A KWF R++   D A  ++NLA++++  +    D  +++RLL++ +     +  +L LA +   VK+  +      LY+ A   +DS  A  K V  L+ G  A   D       +  H    KD                                 V K  +  +  L+     QVL  V +R  AL ++  H         L+L             A  + E     +E V +  A  L E EC +                    ++F+ +PF  R     LP HG    ++   +   CI  +A +NLA L LE  G         V +L  L++  +  L  +N  +VL NG+AGV++D    +++  +A  +T    A A L  A+A        D+ R  R+W+ V+       AD EE  R+ ++V
Sbjct:   17 RRYENAIKFTNNPTAMVELAIMMLNHNTGITRDTDRGVQLLERAIKQAQSPRAMHNLGLYLDDVGNRSERRRAXXXXXXXXXXXXXXXFLYGLASALVDRRCGIAPQPVRAAQLLRRALRLGENPKCMWLLATLLVADPTIQPDTAYAMRLFKRSIQLTNDPEKMNI-------------------------------------LGLYYADGVLRIRPNKRRAIKWFERAIQCADHAYAKYNLAVMLVLRNPP--DPLRSVRLLKEVILTNGDKDAVLFLASVLCAVKQVENYALAHALYDFAVRVYDSTEAMMKLVDYLMIGSPALAVDIPRAFRLLERHYEIAKDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYRVIKGDSEFTATLLRFGAPQVL--VPDRPRALALMQAHSKAEPDDDKLLL-------------AVLISEQGYHDLEQVDYEQAAQLLEAECESV----------------ARKHTFLWMPFYLRVSTIPLPVHGDPNSLTLCTKREECIPHVAQINLAGLYLEGRGLAPDEADRAVNLLTSLLNTRVADLAAMNLGFVLWNGIAGVKKDTVRALELFDEAFGQTGSALAGAYLAGAMATGSDEVAPDLVRAARIWRRVRVACGVCGADPEEYERVCQVV 604          
The following BLAST results are available for this feature:
BLAST of Gvermi12502.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IEM1_9FLOR5.850e-4638.03Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ITQ7_9FLOR2.140e-3735.78Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IUV8_9FLOR8.280e-1623.10Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 234..254
NoneNo IPR availablePANTHERPTHR43628:SF9SEL1-REPEAT-CONTAINING PROTEIN YBEQcoord: 7..131
coord: 150..266
NoneNo IPR availablePANTHERPTHR43628ACTIVATOR OF C KINASE PROTEIN 1-RELATEDcoord: 7..131
coord: 150..266
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 11..180
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 154..274
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 247..279
e-value: 290.0
score: 1.0
coord: 98..133
e-value: 0.059
score: 22.5
coord: 172..208
e-value: 87.0
score: 5.5
coord: 135..170
e-value: 350.0
score: 0.2
coord: 210..245
e-value: 200.0
score: 2.3
coord: 490..526
e-value: 77.0
score: 6.0
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 257..275
e-value: 220.0
score: 2.7
coord: 102..130
e-value: 0.0014
score: 19.2
coord: 214..238
e-value: 180.0
score: 3.1
coord: 175..200
e-value: 0.19
score: 12.4
coord: 156..168
e-value: 150.0
score: 3.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 3..307
e-value: 2.8E-32
score: 113.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:5669222..5670994 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12502.t1Gvermi12502.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 5669222..5670994 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12502.t1 ID=Gvermi12502.t1|Name=Gvermi12502.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=591bp
MDSDKNETLAKARALERAVRRHGDIDAMTDLGTMMVFEDVFASQRMRGVQ
FLNRAIKQGRHPHAMYFLAKFFTDQQVNGAASLAAPLLERALRLDERPEI
LHRLGLLYLYGKGVRKDAAHAAGLFERALRLEQDPYLMESLAIALLQAPS
MHQHRRRALKLYRKAIDMTADPLVMNRLGLQYSEGTCVLKANASKARKWF
MRSLNRCDDAAPRFNLALLMLDGDADEDDVTQAIRLLEDSLEKEQHELTM
LELADLYVKRSVDVERGVNLYEAAALRFDSGAARFKFVHNLLGCRAATPD
NRVRVHDFCLKDVQKNRNLGSLVLMAQVLWSVSERKEALRILDIHQWTRH
GVFSLMLRYDLSLHPGGRKRARALMETFDSRIEDVCFSDAVILSERECAA
DRLRALERFERDRKRRDVNVYSFVLPFARRCRFDLPFHGGLECVSNAMRV
FTCIADLACLNLASLLLETEGRQHECVGVLEGLMDGNLRLLGQLNCAYVL
MNGVAGVQRDWESGMQMLRDAVSETNDVSARAMLGNALAQQKGASDEDVE
RGWRLWKGVQEEADGEELRRLGRLVCRSSEQKWAQLRDAH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf