Gvermi12498.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12498.t1
Unique NameGvermi12498.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length281
Homology
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BLAST of Gvermi12498.t1 vs. uniprot
Match: A0A2V3J1M9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1M9_9FLOR)

HSP 1 Score: 306 bits (784), Expect = 2.010e-101
Identity = 146/259 (56.37%), Postives = 185/259 (71.43%), Query Frame = 0 
Query:   20 RSAQPNGCGESESCVVVLDLDSGEPPSVQNQGRKASEFPPQPCASNLKCKNRELEDCQNVGFLNTNIGFIPVISAVDSGGAFVVFGSDIVPFS--FRFLDNDTPGLGFLFRPLTTAFTGTPDNQPFLVSLTLAPKVRPPATLEPPPYTFGFDFALYNRPSLDAVPLETVLYRRGTFRNGGCDLEDVFRPIPQELLSIEQSDNFQDARDNPVVVIPAFLTVYRLRVTFETDTECASFLFSTTTPCCTVDNSKFKNPGCNR 276
            R+A+  GC  S  C    +L++  P +   +GR  S   P PCASNLKCK  EL DC+ VG +++NIGFIPVIS +D+GG   +F S +VP S  F FLDND P LG LFRP T +F GTPDN+PFL+SL LAPKVRPPA LEPPPY F FDF LYNRP+ D VPL T+LYRRGTF++G C+LE+ FRPIP+E ++   SD F D     V+ IP  + + RLRVT +TD EC   +F++TTPCCT++++KFK+PGCNR
Sbjct:   18 RAAESQGCSGSSPCPFEANLNAKSPATTFTRGRLDSRIKPVPCASNLKCKKNELLDCETVGLIDSNIGFIPVISTLDAGGVLALFSSSVVPVSTRFLFLDNDQPNLGALFRP-TQSFIGTPDNEPFLISLILAPKVRPPAQLEPPPYVFAFDFTLYNRPAFDKVPLRTMLYRRGTFKDGSCELENTFRPIPEEWITEVDSDAFLDVLGRVVIAIPIDIPITRLRVTLDTDEECVGVVFASTTPCCTLNDAKFKDPGCNR 275
The following BLAST results are available for this feature:
BLAST of Gvermi12498.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J1M9_9FLOR2.010e-10156.37Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..280
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..17

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:5512320..5513232 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12498.t1Gvermi12498.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 5512320..5513232 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12498.t1 ID=Gvermi12498.t1|Name=Gvermi12498.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=281bp
MLRLSHVLVVTSFLLLVSTRSAQPNGCGESESCVVVLDLDSGEPPSVQNQ
GRKASEFPPQPCASNLKCKNRELEDCQNVGFLNTNIGFIPVISAVDSGGA
FVVFGSDIVPFSFRFLDNDTPGLGFLFRPLTTAFTGTPDNQPFLVSLTLA
PKVRPPATLEPPPYTFGFDFALYNRPSLDAVPLETVLYRRGTFRNGGCDL
EDVFRPIPQELLSIEQSDNFQDARDNPVVVIPAFLTVYRLRVTFETDTEC
ASFLFSTTTPCCTVDNSKFKNPGCNRPTRV*
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