Gvermi12496.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12496.t1
Unique NameGvermi12496.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length193
Homology
BLAST of Gvermi12496.t1 vs. uniprot
Match: A0A2V3IMC6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMC6_9FLOR)

HSP 1 Score: 123 bits (308), Expect = 2.270e-32
Identity = 71/155 (45.81%), Postives = 93/155 (60.00%), Query Frame = 0
Query:   33 MHFDIVRNKRHHTKQLLQILRADTAQVLYTVHKTPGGVKLVSTATNATLFRATINKTFKTVRIHAAHDDSALFTTRQHGSLFSITDVFHGEMNEESAPDIQLCAGSDYTLTEVNGGRTLAVVERELRWTQFTHHSVYVDVGLNAPLYLLLVVTIN 187
            M F +   K  HTKQL  I RADT   LY +H++  G KL  + T+  L++A I+ T   V+I  A  +  L TTRQ G LF IT VF G+ N    P +++CA  DY L E   GR LAVV+R +R+ +  H +V VD GLNAP+ LLL+ TIN
Sbjct:    1 MSFTLTPPKHTHTKQLCHITRADTEHSLYRIHRSHNGFKLFDSHTHELLYKAVIDITLNVVQIVDAKSEQVLLTTRQKGHLFPITQVFTGD-NTAVEPYVEVCAALDYELCERETGRVLAVVDRVVRYAERAHCNVCVDTGLNAPVLLLLISTIN 154          
BLAST of Gvermi12496.t1 vs. uniprot
Match: A0A2V3IIY6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIY6_9FLOR)

HSP 1 Score: 124 bits (310), Expect = 2.720e-32
Identity = 71/187 (37.97%), Postives = 103/187 (55.08%), Query Frame = 0
Query:    1 MMLTETLRHALPSLPSRHSRQGATYPQKFNRVMHFDIVRNKRHHTKQLLQILRADTAQVLYTVHKTPGGVKLVSTATNATLFRATINKTFKTVRIHAAHDDSALFTTRQHGSLFSITDVFHGEMNEESAPDIQLCAGSDYTLTEVNGGRTLAVVERELRWTQFTHHSVYVDVGLNAPLYLLLVVTIN 187
            M L   LRHA+P +   HS+        F+    F +   K  H K+L  I  A++   LY + +   G++L        L+R  ++ +  T+RI  A  D  + TTRQ G LFSI  VF+G+      P I++CA  DY +TE  GGR LA VE+ +RW++ +H SV++  GLNAPL LLL+ +IN
Sbjct:    1 MHLNHHLRHAIPHITHLHSKTHTPSQIVFDHPTEFHLTLKKHTHAKELFSIKEANSEHALYHILRCQDGLRLTDKH-GEELYRTAVSSSDNTMRIRDARTDDIVITTRQRGQLFSIVQVFNGD-GFYGKPFIEVCAALDYKVTEAEGGRLLATVEQVVRWSEPSHCSVHIATGLNAPLLLLLIASIN 185          
The following BLAST results are available for this feature:
BLAST of Gvermi12496.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IMC6_9FLOR2.270e-3245.81Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IIY6_9FLOR2.720e-3237.97Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:5470100..5470678 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12496.t1Gvermi12496.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 5470100..5470678 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12496.t1 ID=Gvermi12496.t1|Name=Gvermi12496.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=193bp
MMLTETLRHALPSLPSRHSRQGATYPQKFNRVMHFDIVRNKRHHTKQLLQ
ILRADTAQVLYTVHKTPGGVKLVSTATNATLFRATINKTFKTVRIHAAHD
DSALFTTRQHGSLFSITDVFHGEMNEESAPDIQLCAGSDYTLTEVNGGRT
LAVVERELRWTQFTHHSVYVDVGLNAPLYLLLVVTINLLTDV*
back to top