Gvermi12495.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12495.t1
Unique NameGvermi12495.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length304
Homology
BLAST of Gvermi12495.t1 vs. uniprot
Match: A0A2V3IMC3_9FLOR (Beta-glucanase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMC3_9FLOR)

HSP 1 Score: 377 bits (967), Expect = 4.530e-125
Identity = 173/242 (71.49%), Postives = 202/242 (83.47%), Query Frame = 0
Query:   62 NNITKFGAGQNSIYFAPNWASGPVFRNEWDPNLVQWDGNKLSLTVEKRIDEIFYGAAIRTHSRWYGYGCVSACMKPIDVSGIISSLFTYTGKYDGIGGSTPNQNEIDIEFEGHDTTKVQFNFYTNYDENSVQRNEYVHDLGYDASQSYNVYGFRWTPWGIQWEVNGQVVKEVSNENGNTTPVVTATTVQKVMANAWIVPEATGPFFGGVFDSDTFVSASAEYRWIRYEKLDEHGCCAISDSC 303
            + + KFG+  +SIY+A N+ SGPVFR+ WDPNLV WDG+KLS TVEKR D   YGA +RT+S WYGYGCVSACMKPI VSGII+SLFTYTG +DGIGGS PN NEIDIEFEG DTT VQFN+YT+ D ++VQ NE+ H+LG+DASQS+NVYGFRWTPWGI+WEVNGQ+V +V N  G TTP VT+TTVQKVMANAWIV E+   FFGG FD  +F +ASAEYRWIRY+KLDE+GCCAIS SC
Sbjct:  300 SELQKFGSELSSIYYASNFPSGPVFRSNWDPNLVSWDGSKLSFTVEKRSDGSLYGAELRTNSHWYGYGCVSACMKPIPVSGIITSLFTYTGNFDGIGGSAPNHNEIDIEFEGKDTTIVQFNYYTDDDGSTVQTNEHDHNLGFDASQSFNVYGFRWTPWGIEWEVNGQIVHQVQNNGGTTTPTVTSTTVQKVMANAWIVRESAEAFFGGAFDEASFSTASAEYRWIRYDKLDENGCCAISPSC 541          
BLAST of Gvermi12495.t1 vs. uniprot
Match: UPI00111732AB (family 16 glycosylhydrolase n=1 Tax=Bacillus alkalicellulosilyticus TaxID=1912214 RepID=UPI00111732AB)

HSP 1 Score: 148 bits (373), Expect = 3.650e-38
Identity = 89/223 (39.91%), Postives = 121/223 (54.26%), Query Frame = 0
Query:   80 WASGPVFRNEWDPNLVQWDGNKLSLTVEKRIDEI----FYGAAIRTHSRWYGYGCVSACMKPIDVSGIISSLFTYTGKYDGIGGSTPNQNEIDIEFEGHDTTKVQFNFYTNYDENSVQRNEYVHDLGYDASQSYNVYGFRWTPWGIQWEVNGQVVKEVSNENGNTTPVVTATTVQKVMANAWIVPEATGPFFGGVFDSDTFVSASAEYRWIRY---EKLDEHG 295
            W +G +F   W P  V +   K+ L ++K  DE     +    +RT+ ++Y YG     MKP   +G +SS FTYTG +D         +EIDIEF G DTT+VQFN++TN     V  NE+ HDLG+DAS+S+N Y F W P  I W VNG++V   + EN   TP       QK+M N W  P      + GVFD +       EY W+RY   E+LD++G
Sbjct:   93 WTNGAMFNATWYPEQVTFSDGKMKLQIDKEDDEEAVPEYKAGELRTN-QFYQYGLFEVNMKPAKSTGTVSSFFTYTGPWDW---DNDPWDEIDIEFLGKDTTRVQFNYFTN----GVGNNEHYHDLGFDASESFNTYAFEWRPDSISWYVNGELVY-TATENIPQTP-------QKIMMNLW--PGIGVDAWTGVFDGED-TPVVTEYDWVRYTPLEELDDNG 296          
BLAST of Gvermi12495.t1 vs. uniprot
Match: A0A521WHF7_9GAMM (Glycosyl hydrolase family protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A521WHF7_9GAMM)

HSP 1 Score: 149 bits (375), Expect = 7.240e-38
Identity = 85/214 (39.72%), Postives = 120/214 (56.07%), Query Frame = 0
Query:   77 APNWASGPVFRNEWDPNLVQWDGNKLSLTVEKRID--EIFYGAAIRTHSRWYGYGCVSACMKPIDVSGIISSLFTYTGKYDGIGGSTPNQNEIDIEFEGHDTTKVQFNFYTNYDENSVQRNEYVHDLGYDASQSYNVYGFRWTPWGIQWEVNGQVVKEVSNENGNTTPVVTATTVQKVMANAWIVPEATGPFFGGVFDSDTFVSASAEYRWIRY 288
            A  W +G  F N W  + V + G +++L ++   D  E +     RT + ++GYGC  A  +P   +G +SS FT+ G YD   G     NEID+EF G DT +VQFNF+TN D++   RNE   DLG+DA+ + +VYGF+WT  GI+W V+G +V E  +   N TP     ++ KVM N W V E    + G    S   V+AS  Y W+RY
Sbjct:  128 ADGWKNGSPFDNAWRADHVGFGGGQMTLRLDDVADLGEPYSSGEYRT-TGFHGYGCYEASFRPAGAAGTVSSFFTFAGPYDN--GGNGRHNEIDVEFIGSDTRRVQFNFWTN-DDSYASRNEVAVDLGFDAADAAHVYGFKWTATGIRWYVDGALVHEAFDSPANPTPKA-GESLHKVMMNLWPVDETAAGWAGTFAWSGAPVTAS--YDWVRY 334          
BLAST of Gvermi12495.t1 vs. uniprot
Match: Q45648_BACSP (Beta-glucanase n=2 Tax=Bacillaceae TaxID=186817 RepID=Q45648_BACSP)

HSP 1 Score: 142 bits (359), Expect = 3.580e-37
Identity = 87/224 (38.84%), Postives = 119/224 (53.12%), Query Frame = 0
Query:   80 WASGPVFRNEWDPNLVQWDGNKLSLTVEKRIDEI----FYGAAIRTHSRWYGYGCVSACMKPIDVSGIISSLFTYTGKYDGIGGSTPNQNEIDIEFEGHDTTKVQFNFYTNYDENSVQRNEYVHDLGYDASQSYNVYGFRWTPWGIQWEVNGQVVKEVSNENGNTTPVVTATTVQKVMANAWI---VPEATGPFFGGVFDSDTFVSASAEYRWIRYEKLDEHGC 296
            W++G +F   W P  V +   K+ L +EK  +E     +    +RT+  +Y YG     MKP   +G +SS FTYTG +D         +EIDIEF G DTTK+QFN++TN     V  NE+ H+LG+DA+  +N Y F W P  I+W VNG++V   + EN   TP       QK+M N W    V   TG F G     DT V    +Y W++Y  L+E GC
Sbjct:   58 WSNGQMFNATWYPEQVTFSNGKMKLQIEKEDNETASPPYKAGELRTND-FYHYGLFEVSMKPAKSTGTVSSFFTYTGPWDW---ENDPWDEIDIEFLGKDTTKIQFNYFTN----GVGGNEHYHELGFDAADDFNTYAFEWRPESIRWFVNGELV-HTATENIPQTP-------QKIMMNLWPGIGVDGWTGRFNG----EDTPVVT--QYDWVKYTPLEELGC 259          
BLAST of Gvermi12495.t1 vs. uniprot
Match: A0A378NPJ2_9FIRM (Beta-glucanase n=7 Tax=Selenomonadaceae TaxID=1843491 RepID=A0A378NPJ2_9FIRM)

HSP 1 Score: 139 bits (350), Expect = 5.210e-36
Identity = 90/222 (40.54%), Postives = 115/222 (51.80%), Query Frame = 0
Query:   77 APNWASGPVFRNEWDPNLVQWDGNKLSLTV--EKRIDEIFYGAAIRTHSRWYGYGCVSACMKPIDVSGIISSLFTYTGKYDGIGGSTPNQNEIDIEFEGHDTTKVQFNFYTNYDENSVQRNEYVHDLGYDASQSYNVYGFRWTPWGIQWEVNGQVVKEVSNENGNTTPVVTATTVQKVMANAWI---VPEATGPFFGGVFDSDTFVSASAEYRWIRYEKLDE 293
            A  W +G +F   W    V +DG  L L +  EK+ D+I Y         +YGYG     MKPI   G++SS FTYTG  D    + P  +EIDIEF G DTTKVQFN+Y     +    +EY++DLG+DAS+S++ YGF W    I W V+G   KEV    G T PV    T  K+M NAW    V E    F       D  +   AEY+WI+Y    E
Sbjct:   62 ADGWTNGYMFNVNWHKENVTFDGGNLQLIIDKEKKADKIPYSGGEFRSKDFYGYGKYEVSMKPIKNDGVVSSFFTYTGPSD----NNP-WDEIDIEFLGKDTTKVQFNYY----RDGKGGHEYLYDLGFDASESFHTYGFEWHKDKIIWFVDG---KEVYRLEGTTIPV----TKSKLMMNAWCGTGVDEWLNAF------DDKNLPVKAEYQWIKYTPFTE 261          
BLAST of Gvermi12495.t1 vs. uniprot
Match: GUB_BREBE (Beta-glucanase n=1 Tax=Brevibacillus brevis TaxID=1393 RepID=GUB_BREBE)

HSP 1 Score: 139 bits (349), Expect = 6.950e-36
Identity = 85/217 (39.17%), Postives = 114/217 (52.53%), Query Frame = 0
Query:   80 WASGPVFRNEWDPNLVQWDGNKLSLTVEKRIDEI--FYGAAIRTHSRWYGYGCVSACMKPIDVSGIISSLFTYTGKYDGIGGSTPNQNEIDIEFEGHDTTKVQFNFYTNYDENSVQRNEYVHDLGYDASQSYNVYGFRWTPWGIQWEVNGQVVKEVSNENGNTTPVVTATTVQKVMANAWIVPEATGPFFGGVFDSDTFVSASAEYRWIRYEKLDEH 294
            W +G +F   W P  V  DG  + LT+ K+      +    +RT+  +Y YG     MKP  V G +SS FTYTG++D  G      +EIDIEF G DTT++QFN++TN     V  NE+ +DLG+DAS+S+N Y F W    I W VNG+ V   + EN   TP       QK+M N W  P      + GVFD D      + Y W+RY  L  +
Sbjct:   59 WTNGQMFNATWYPEQVTADG-LMRLTIAKKTTSARNYKAGELRTND-FYHYGLFEVSMKPAKVEGTVSSFFTYTGEWDWDGDPW---DEIDIEFLGKDTTRIQFNYFTN----GVGGNEFYYDLGFDASESFNTYAFEWREDSITWYVNGEAV-HTATENIPQTP-------QKIMMNLW--PGVGVDGWTGVFDGDN-TPVYSYYDWVRYTPLQNY 255          
BLAST of Gvermi12495.t1 vs. uniprot
Match: UPI0006A980C4 (family 16 glycosylhydrolase n=1 Tax=Alkalihalobacillus halodurans TaxID=86665 RepID=UPI0006A980C4)

HSP 1 Score: 140 bits (353), Expect = 1.590e-35
Identity = 84/223 (37.67%), Postives = 115/223 (51.57%), Query Frame = 0
Query:   80 WASGPVFRNEWDPNLVQWDGNKLSLTVEKRIDEI---------FYGAAIRTHSRWYGYGCVSACMKPIDVSGIISSLFTYTGKYDGIGGSTPNQNEIDIEFEGHDTTKVQFNFYTNYDENSVQRNEYVHDLGYDASQSYNVYGFRWTPWGIQWEVNGQVVKEVSNENGNTTPVVTATTVQKVMANAWIVPEATGPFFGGVFDSDTFVSASAEYRWIRYEKLDE 293
            W +G +F   W P  V      + LT++K  +++         +    +RT+  +Y YG     MKP  V G +SS FTYTG++D  G      +EIDIEF G DTT++QFN++TN     V  NE+ +DLG+DAS+S+N Y F W    I W VNG+ V   + EN   TP       QK+M N W  P      + GVFD D      + Y W+RY  L E
Sbjct:   59 WTNGQMFNATWYPEQVTLSDGLMRLTIDKEDEQVLENDEQAPPYKAGELRTND-FYHYGLFEVSMKPAKVEGTVSSFFTYTGEWDWDGDPW---DEIDIEFLGKDTTRIQFNYFTN----GVGGNEFYYDLGFDASESFNTYAFEWREDSITWYVNGEAV-HTATENIPQTP-------QKIMMNLW--PGVGVDGWTGVFDGDN-TPVYSYYDWVRYTPLSE 262          
BLAST of Gvermi12495.t1 vs. uniprot
Match: GUB_ORPSP (Beta-glucanase n=2 Tax=unclassified Orpinomyces TaxID=2642122 RepID=GUB_ORPSP)

HSP 1 Score: 137 bits (345), Expect = 1.890e-35
Identity = 86/236 (36.44%), Postives = 123/236 (52.12%), Query Frame = 0
Query:   57 YDGSTNNITKFGAGQNSIYFAPNWASGPVFRNEWDPNLVQWDGNKLSLTVEKRIDEIFYGAAIRTHSRWYGYGCVSACMKPIDVSGIISSLFTYTGKYDGIGGSTPNQNEIDIEFEGHDTTKVQFNFYTNYDENSVQRNEYVHDLGYDASQSYNVYGFRWTPWGIQWEVNGQVVKEVSNENGNTTPVVTATTVQKVMANAWI---VPEATGPFFGGVFDSDTFVSASAEYRWIRYE 289
            ++GS +++  F   +++ +   NW +G +F   W PN  +++  KL LT+++  D   Y         +YGYG     MKPI   G++SS FTYTG  DG        +EIDIEF G+DTTKVQFN+YTN        +E++H LG+DASQ ++ YGF W    I W V+G  V   + +N   TP        K+M NAW    V +   PF G         + SA Y W+ Y+
Sbjct:   33 WNGS-HDVMDFNYHESNRFEMSNWPNGEMFNCRWTPNNDKFENGKLKLTIDR--DGSGYTCGEYRTKNYYGYGMFQVNMKPIKNPGVVSSFFTYTGPSDGT-----KWDEIDIEFLGYDTTKVQFNYYTN----GQGHHEHIHYLGFDASQGFHTYGFFWARNSITWYVDGTAVY-TAYDNIPDTP-------GKIMMNAWNGIGVDDWLRPFNGRT-------NISAYYDWVSYD 241          
BLAST of Gvermi12495.t1 vs. uniprot
Match: A0A1H7W395_9FIRM (Beta-glucanase n=5 Tax=unclassified Butyrivibrio TaxID=2639466 RepID=A0A1H7W395_9FIRM)

HSP 1 Score: 140 bits (354), Expect = 4.700e-35
Identity = 86/231 (37.23%), Postives = 125/231 (54.11%), Query Frame = 0
Query:   59 GSTNNITKFGAGQNSIYFAPNWASGPVFRNEWDPNLVQWDGNKLSLTVEKRIDEIFYGAAIRTHSRWYGYGCVSACMKPIDVSGIISSLFTYTGKYDGIGGSTPNQNEIDIEFEGHDTTKVQFNFYTNYDENSVQRNEYVHDLGYDASQSYNVYGFRWTPWGIQWEVNGQVVKEVSNENGNTTPVVTATTVQKVMANAWIVPEATGPFFGGVFDSDTFVSASAEYRWIRYE 289
            G T++   F    +S +   +W++G +F   W PN V +   ++ LT+++     + G   RT  ++YGYG     MKPI  SG++SS FTYTG+ DG        +EIDIEF G+DTTKVQFN+YTN   N    +EY+++LG+DASQS++ YGF W    I W V+G+ V   + +  NT          K+M N W  P      +   +D  T +SA   Y W  Y+
Sbjct:   33 GGTHDGMAFDYHDSSQFEMSSWSNGGMFDCTWSPNNVSFANGQMKLTIDRNWQG-YTGGEYRT-KKYYGYGLFQVNMKPIKNSGVVSSFFTYTGESDGT-----KWDEIDIEFLGYDTTKVQFNYYTNGQGN----HEYLYNLGFDASQSFHTYGFDWNAGSITWYVDGKAVFTATRDIPNTPG--------KIMMNVW--PGTGVDNWLRHYDGRTGISAY--YDWASYD 240          
BLAST of Gvermi12495.t1 vs. uniprot
Match: UPI000998E755 (family 16 glycosylhydrolase n=3 Tax=Bacillaceae TaxID=186817 RepID=UPI000998E755)

HSP 1 Score: 139 bits (351), Expect = 5.220e-35
Identity = 89/226 (39.38%), Postives = 120/226 (53.10%), Query Frame = 0
Query:   71 QNSIYFAPNWASGPVF-RNEWDPNLVQWDGNKLSLTVEKR---IDEIFYGAAIRTHSRWYGYGCVSACMKPIDVSGIISSLFTYTG-KYDGIGGSTPNQNEIDIEFEGHDTTKVQFNFYTNYDENSVQRNEYVHDLGYDASQSYNVYGFRWTPWGIQWEVNGQVVKEVSNENGNTTPVVTATTVQKVMANAWI---VPEATGPFFGGVFDSDTFVSASAEYRWIRY 288
             N+   +  W +  VF  + W  N V + G +L L++ +         Y +   T + +YGYG     MKP +VSG+ISS FTYTG  Y+G        +EIDIEF G+DTTKVQFN+YTN     V  NE ++DLG+DASQS+N Y F W P  I W VNGQ+V   + EN  + P        K+M N W    + E  G + G         +A+A Y W+RY
Sbjct:   44 SNNWQISDGWKNDDVFFGSHWSSNRVNFSGGELELSLRRNDAYARPYNYESGEYTTNHFYGYGLYEVSMKPANVSGVISSFFTYTGPSYNGAPW-----DEIDIEFLGNDTTKVQFNYYTN----GVGGNEILYDLGFDASQSFNTYAFDWQPNYISWYVNGQLVA-TATENIPSNP-------SKIMMNIWNTYGIDEWAGRYSGQ--------NANAYYEWVRY 244          
The following BLAST results are available for this feature:
BLAST of Gvermi12495.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IMC3_9FLOR4.530e-12571.49Beta-glucanase n=1 Tax=Gracilariopsis chorda TaxID... [more]
UPI00111732AB3.650e-3839.91family 16 glycosylhydrolase n=1 Tax=Bacillus alkal... [more]
A0A521WHF7_9GAMM7.240e-3839.72Glycosyl hydrolase family protein n=1 Tax=Gammapro... [more]
Q45648_BACSP3.580e-3738.84Beta-glucanase n=2 Tax=Bacillaceae TaxID=186817 Re... [more]
A0A378NPJ2_9FIRM5.210e-3640.54Beta-glucanase n=7 Tax=Selenomonadaceae TaxID=1843... [more]
GUB_BREBE6.950e-3639.17Beta-glucanase n=1 Tax=Brevibacillus brevis TaxID=... [more]
UPI0006A980C41.590e-3537.67family 16 glycosylhydrolase n=1 Tax=Alkalihalobaci... [more]
GUB_ORPSP1.890e-3536.44Beta-glucanase n=2 Tax=unclassified Orpinomyces Ta... [more]
A0A1H7W395_9FIRM4.700e-3537.23Beta-glucanase n=5 Tax=unclassified Butyrivibrio T... [more]
UPI000998E7555.220e-3539.38family 16 glycosylhydrolase n=3 Tax=Bacillaceae Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000757Glycoside hydrolase family 16PFAMPF00722Glyco_hydro_16coord: 86..257
e-value: 6.9E-26
score: 90.8
IPR000757Glycoside hydrolase family 16PROSITEPS51762GH16_2coord: 7..294
score: 17.422791
NoneNo IPR availableGENE3D2.60.120.200coord: 61..290
e-value: 3.8E-41
score: 143.2
NoneNo IPR availablePANTHERPTHR31062:SF1XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATEDcoord: 93..259
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 32..57
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..31
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 58..303
NoneNo IPR availableTMHMMTMhelixcoord: 35..57
IPR044791Beta-glucanase/XTHPANTHERPTHR31062XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATEDcoord: 93..259
IPR013320Concanavalin A-like lectin/glucanase domain superfamilySUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 79..292

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:5464064..5465411 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12495.t1Gvermi12495.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 5464064..5465411 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12495.t1 ID=Gvermi12495.t1|Name=Gvermi12495.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=304bp
MVPSPPASFSAIPSLYIAKHALNVTIRIKITLFYGSIVSVGISLILSKSI
FAIFIFYDGSTNNITKFGAGQNSIYFAPNWASGPVFRNEWDPNLVQWDGN
KLSLTVEKRIDEIFYGAAIRTHSRWYGYGCVSACMKPIDVSGIISSLFTY
TGKYDGIGGSTPNQNEIDIEFEGHDTTKVQFNFYTNYDENSVQRNEYVHD
LGYDASQSYNVYGFRWTPWGIQWEVNGQVVKEVSNENGNTTPVVTATTVQ
KVMANAWIVPEATGPFFGGVFDSDTFVSASAEYRWIRYEKLDEHGCCAIS
DSC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000757GH16
IPR044791Beta-glucanase/XTH
IPR013320ConA-like_dom_sf