Gvermi12494.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12494.t1
Unique NameGvermi12494.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length252
Homology
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BLAST of Gvermi12494.t1 vs. uniprot
Match: R7Q4N0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4N0_CHOCR)

HSP 1 Score: 95.5 bits (236), Expect = 1.910e-20
Identity = 56/151 (37.09%), Postives = 86/151 (56.95%), Query Frame = 0 
Query:   63 KIGDSKFPATKMTWERLLQDFPVRPAHQRSLVPVAFGGASKKIYEELSSSNLDADARKLWEMLEARLYNASQQRGQLNAFFSARWKEKQEATEQFYARLRTQALRLPE---------------PS-LRSQTYVMSGNYDEVVSKMSLLTKS 197
            +IGD  F   K +W+RL +DFP     ++ L+P+AF G ++ +YEE++  N DA   +LW++L  RL N   Q    + FF+  W EK+E+ E+F  RLR+ +L LP                PS L+ Q  + SG +DEVVS++S L+ +
Sbjct:   10 RIGDGSFFIAKRSWDRLCKDFPTTTTGRKRLLPLAFDGDARFVYEEIAGFNPDATCDELWKLLGNRLCNEIHQSALRDRFFAMTWNEKRESFEKFAWRLRSASLLLPGTVDDGLLLNRLKNGLPSRLQDQAKLASGTFDEVVSRVSSLSSA 160
The following BLAST results are available for this feature:
BLAST of Gvermi12494.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7Q4N0_CHOCR1.910e-2037.09Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:5446383..5447744 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12494.t1Gvermi12494.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 5446383..5447744 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12494.t1 ID=Gvermi12494.t1|Name=Gvermi12494.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=252bp
MLESLKSARTSPPVLSQVAAKSATADESTFDASAMVLADSEYLSPGSAHK
IYSREFHLTRVSKIGDSKFPATKMTWERLLQDFPVRPAHQRSLVPVAFGG
ASKKIYEELSSSNLDADARKLWEMLEARLYNASQQRGQLNAFFSARWKEK
QEATEQFYARLRTQALRLPEPSLRSQTYVMSGNYDEVVSKMSLLTKSGMS
RPERVKEAKEYDNAGQRAGHRDRVCYKCRNPGDIARFCPDIKDIGAAPAQ
T*
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