Gvermi12485.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12485.t1
Unique NameGvermi12485.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length376
Homology
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BLAST of Gvermi12485.t1 vs. uniprot
Match: A0A2V3IMH0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMH0_9FLOR)

HSP 1 Score: 318 bits (816), Expect = 1.710e-103
Identity = 147/318 (46.23%), Postives = 203/318 (63.84%), Query Frame = 0 
Query:   52 SCVYAMGIQNNEGLGQTLLRNQFSVYIAELLSSKIQFPEHISQHGYNLADFFDRCAPPASANNRSPPNIPEHCMLRKKQLLLRNCPRGDCACLKEATMKYVLPLASRCDIIGAEHDGFKTQEYSGCISNALKRYFGGPNRWPRPYDAIHHRQGDLQSEHNSNSEWLYMLNNIVSFMCKHSDRDIIIITQGEPKVPKCGNRVVLAGNTTERGAFPIMQHARWVGVENSGFGIAMVEISNPERVLMDTFVMQWYDWLTKPEWTVFNSAGGVFSFASGSEAIAAKYAGAGLEVRTIRSPDLKKFDKFETEVPPRRWEKEAL 369
            +CV A+G QNNEG+GQ L RNQ +V++AE++ +K+  P   + HGY L+ FFD C  PA             C L +  LLL  C R DC CL+     YV  +A RC  IG   D +K+ EY+GC+ N L RYFGGP RW RPYDA+H R GDL      +      ++ +++F+CKHSDRDII++TQG P +P+CG+RVVLA NTT + AF I QHA W  +E+SG  IAM++IS P+RV++  + + ++DWL  P WT+ +  G +F F S   A+ A +AG  L +R+ R+P L+K+ K E E+P RRW+ EAL
Sbjct:   55 NCVQALGFQNNEGIGQALRRNQMAVFVAEMVQAKLSLPNRTTAHGYALSSFFDHCDMPAEQE--------PFCTLDQSSLLLNRCERADCDCLQRQLAPYVQRMAHRCKTIGVVTDNYKSLEYAGCLRNTLTRYFGGPTRWKRPYDAVHFRLGDLAHRKADSRTTRLWMHFVITFLCKHSDRDIIVVTQGNPTIPRCGSRVVLASNTTIQEAFGIFQHATWTSMEHSGLAIAMMQISRPQRVILSRWTLDFWDWLVVPSWTIVDGDGALFHFDSKELAMKAAFAGGDLSIRSYRNPSLRKYFKIEDEIPSRRWQDEAL 364
The following BLAST results are available for this feature:
BLAST of Gvermi12485.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IMH0_9FLOR1.710e-10346.23Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 17..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..37
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 29..37
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 38..375
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:5318900..5320027 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12485.t1Gvermi12485.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 5318900..5320027 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12485.t1 ID=Gvermi12485.t1|Name=Gvermi12485.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=376bp
MSHRQRAVSSLRRHYHLLFIIIILTCLLSASHPRVHSVVRSTALRTTRYR
TSCVYAMGIQNNEGLGQTLLRNQFSVYIAELLSSKIQFPEHISQHGYNLA
DFFDRCAPPASANNRSPPNIPEHCMLRKKQLLLRNCPRGDCACLKEATMK
YVLPLASRCDIIGAEHDGFKTQEYSGCISNALKRYFGGPNRWPRPYDAIH
HRQGDLQSEHNSNSEWLYMLNNIVSFMCKHSDRDIIIITQGEPKVPKCGN
RVVLAGNTTERGAFPIMQHARWVGVENSGFGIAMVEISNPERVLMDTFVM
QWYDWLTKPEWTVFNSAGGVFSFASGSEAIAAKYAGAGLEVRTIRSPDLK
KFDKFETEVPPRRWEKEALHEENHS*
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