Gvermi12478.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12478.t1
Unique NameGvermi12478.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length649
Homology
BLAST of Gvermi12478.t1 vs. uniprot
Match: A0A0C3AKN9_9AGAM (Uncharacterized protein n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AKN9_9AGAM)

HSP 1 Score: 79.7 bits (195), Expect = 1.050e-11
Identity = 71/310 (22.90%), Postives = 131/310 (42.26%), Query Frame = 0
Query:    6 SPPKNTAETLDNLSATTGALIDAFDQIITLPFVDSLRIDALG--ELSIADVVLDLKQKYQELQGNTLPFARTLYAYAGLQLQTIPTINAGLDLSTYLNLHKLIIARHKLEASNVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKDLQEKERAVAIIAGIFTFIFTVVAILAIVATAGAVGPAASSATSTIAVQGSASVGFFTALGSSIGAAAGTSGLIAVSAAASTAALGGLAETIVSSIEARNFARAVSALETLKESAETARDHLLEVVNLMTVIENSLEDIVSVWTDVESSLSIIQSD 313
            +PP  +A+TL +++ATTG +   F +I+T+PF+D L++      E S+  V+L  K KY+ LQ  T+P  R LY+YA LQ   +P +   + L+ +L  ++ ++ ++   A  +                                       +   +   A +II G+ T I          ATAGA+        + +A QG  +V                 G++A          G  A  +  ++ A      +S+L+ +  S++T  D L +V+ ++  I   +  I  +W  ++ SL+ +Q +
Sbjct:  375 APPAYSAQTLPDMTATTGKINADFTKIMTMPFIDQLKVTGADGQETSLGSVMLSCKTKYEALQMKTIPIVRDLYSYAMLQQTVLPIVGNTMSLTDFLASNQWLVMKYGASAKQIAKDTRALLDEYQGFHAMLLKNLDEVNKSIKANEEALRAAQAQYDALMAKSIIEGLITLI----------ATAGAIA-------ALVAGQGPLAVSL---------------GILAA---------GNFASMVADAVAADKLPAVISSLKGIISSSQTTADELKQVIPVLQNIIELMSQISDIWDSIDGSLASVQQE 643          
BLAST of Gvermi12478.t1 vs. uniprot
Match: A0A0D2P279_HYPSF (Uncharacterized protein n=1 Tax=Hypholoma sublateritium (strain FD-334 SS-4) TaxID=945553 RepID=A0A0D2P279_HYPSF)

HSP 1 Score: 71.2 bits (173), Expect = 4.400e-9
Identity = 39/115 (33.91%), Postives = 69/115 (60.00%), Query Frame = 0
Query:    7 PPKNTAETLDNLSATTGALIDAFDQIITLPFVDSLRIDALGEL--SIADVVLDLKQKYQELQGNTLPFARTLYAYAGLQLQTIPTINA--GLDLSTYLNLHKLIIARHKLEASNV 117
            PP + + TL  +SATTG ++  F++I+TLPFVD L++    E+  S+  V+++ K++Y+ LQG T+   R L  Y+ LQ   +P +N   GL L  +L  +  ++ ++  +A  +
Sbjct:  341 PPSDASTTLPEMSATTGQIVANFNKILTLPFVDDLKVKDKNEVETSVYTVMVNCKRQYEALQGTTVEIVRDLNGYSLLQDVILPMVNTSDGLSLDEFLRTNLPLVMKYGKDAKKI 455          
BLAST of Gvermi12478.t1 vs. uniprot
Match: A0A0D2L707_HYPSF (Uncharacterized protein n=1 Tax=Hypholoma sublateritium (strain FD-334 SS-4) TaxID=945553 RepID=A0A0D2L707_HYPSF)

HSP 1 Score: 55.1 bits (131), Expect = 7.440e-6
Identity = 31/68 (45.59%), Postives = 46/68 (67.65%), Query Frame = 0
Query:   18 LSATTGALIDAFDQIITLPFVDSLRI-DALG-ELSIADVVLDLKQKYQELQGNTLPFARTLYAYAGLQ 83
            +SATTG +I  FD+I+TLPFVD L++ D  G E S+  ++L+ K +Y+ LQ  T+   R L +Y+ LQ
Sbjct:    1 MSATTGQIIANFDKILTLPFVDDLKVTDVDGVESSVYTIMLNCKTQYEALQSRTVEIVRNLNSYSVLQ 68          
The following BLAST results are available for this feature:
BLAST of Gvermi12478.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A0C3AKN9_9AGAM1.050e-1122.90Uncharacterized protein n=1 Tax=Serendipita vermif... [more]
A0A0D2P279_HYPSF4.400e-933.91Uncharacterized protein n=1 Tax=Hypholoma sublater... [more]
A0A0D2L707_HYPSF7.440e-645.59Uncharacterized protein n=1 Tax=Hypholoma sublater... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 132..166
NoneNo IPR availableCOILSCoilCoilcoord: 470..490
NoneNo IPR availableCOILSCoilCoilcoord: 512..532
NoneNo IPR availableGENE3D1.20.1170.10coord: 57..350
e-value: 2.0E-8
score: 35.7
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 193..648
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..165
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 166..192
NoneNo IPR availableSUPERFAMILY58100Bacterial hemolysinscoord: 78..346
NoneNo IPR availableTMHMMTMhelixcoord: 229..251
NoneNo IPR availableTMHMMTMhelixcoord: 165..187
NoneNo IPR availableTMHMMTMhelixcoord: 202..224

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:5152839..5154785 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12478.t1Gvermi12478.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 5152839..5154785 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12478.t1 ID=Gvermi12478.t1|Name=Gvermi12478.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=649bp
MATELSPPKNTAETLDNLSATTGALIDAFDQIITLPFVDSLRIDALGELS
IADVVLDLKQKYQELQGNTLPFARTLYAYAGLQLQTIPTINAGLDLSTYL
NLHKLIIARHKLEASNVKKQSETFRKTFVATLDVFESTIKELGEQIQDLE
KQIQDTKDLQEKERAVAIIAGIFTFIFTVVAILAIVATAGAVGPAASSAT
STIAVQGSASVGFFTALGSSIGAAAGTSGLIAVSAAASTAALGGLAETIV
SSIEARNFARAVSALETLKESAETARDHLLEVVNLMTVIENSLEDIVSVW
TDVESSLSIIQSDVDNWNDENFSEELVASTLEEWEDVRTAVAKYTAVVSG
DRSLNLEKQSDVHLPADEIINLTRSFAISELQSNLHAPDIEFEGKLSDLC
QMRSALETTKSLPNIRDTLKSQVTAALGHFGEVQTGLEQSSDELASFTKQ
RLAWLDAFEIAEVTKRIDMVAQLEAAVENFEVGIARAQETEAKAFLFQTS
VGLVISTLIRIINENNVKQHALKKELEKLEKDRKRRKWLWVVPVAGAVNE
IVDAANNIRGKIKRGRREIRLISNSCQQLRKLSSTVSSSVKDSTLVTQTY
SSILNDTRAGIDDAAIFKVFGAALPADLFVSLKESWTELEIDIKEFKE*
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