Gvermi12475.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12475.t1
Unique NameGvermi12475.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length248
Homology
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BLAST of Gvermi12475.t1 vs. uniprot
Match: A0A2V3IFE0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFE0_9FLOR)

HSP 1 Score: 114 bits (285), Expect = 4.550e-26
Identity = 97/253 (38.34%), Postives = 125/253 (49.41%), Query Frame = 0 
Query:    1 MQRKMIRLSDSLHRRKRLERHNSRHRLSAQHLVFDRNGHAF-PAAAXXXXXXXXXTQPSPSINFSGVMSSPVLFSRERILKLERENMGTHLAQLRFDDIDDDADADKLAISSMREPTTRRGSSGRSPQKRRYVAHVASPRIHFVPGL----WKAAPN----DSAKVRQLPRDSGCMPTRASPRHPSFPMAPSSPVFSKARSASTASSGGKTVETHRLVNRGEA--PTDIV-DAPQNVMYRRPIALLDRDVEKE 241
            +QR++ R  DSL RR R ER   RH + + H+ FDRNG+A  P  A            S S N S  ++S VL  RERIL++ERE     +  L FDDID+D   D+ A+SS+REP +RR         R+  A      +  +P L    + AA      + AKVRQLPR SG MPTRASPR PS                   SSG K     + V   +   P     ++P   MYR P AL +RDVE+E
Sbjct:   56 VQRRVSRWGDSLRRRTRQERRVPRHLVQSHHVAFDRNGNAAQPPPAPPQ-------SESTSSNLSDALASQVLLHRERILRMEREKKERDVTSLTFDDIDEDDHHDERAVSSLREPWSRR--------VRQVGAREDDDTLLMLPRLSSISFSAAGEPVAVEPAKVRQLPRLSGLMPTRASPRSPSSXXXXXXXXXXXXXXXXXXSSGRKRAAKPQPVQTPDKHHPNPFAANSPHPAMYRLPTALNNRDVERE 293
The following BLAST results are available for this feature:
BLAST of Gvermi12475.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IFE0_9FLOR4.550e-2638.34Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 192..221
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 53..247
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..52
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 35..52
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 27..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:5036474..5037217 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12475.t1Gvermi12475.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 5036474..5037217 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12475.t1 ID=Gvermi12475.t1|Name=Gvermi12475.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=248bp
MQRKMIRLSDSLHRRKRLERHNSRHRLSAQHLVFDRNGHAFPAAAHAFPA
AAHATQPSPSINFSGVMSSPVLFSRERILKLERENMGTHLAQLRFDDIDD
DADADKLAISSMREPTTRRGSSGRSPQKRRYVAHVASPRIHFVPGLWKAA
PNDSAKVRQLPRDSGCMPTRASPRHPSFPMAPSSPVFSKARSASTASSGG
KTVETHRLVNRGEAPTDIVDAPQNVMYRRPIALLDRDVEKENRERHR*
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