Gvermi12462.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12462.t1
Unique NameGvermi12462.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length906
Homology
The following BLAST results are available for this feature:
BLAST of Gvermi12462.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 298..334
e-value: 12.0
score: 13.0
coord: 261..297
e-value: 7.3
score: 14.9
coord: 150..186
e-value: 0.01
score: 25.0
coord: 335..371
e-value: 11.0
score: 13.2
coord: 447..483
e-value: 11.0
score: 13.2
coord: 522..558
e-value: 0.41
score: 19.7
coord: 744..780
e-value: 1.5
score: 17.9
coord: 373..409
e-value: 0.12
score: 21.5
coord: 484..520
e-value: 0.053
score: 22.7
coord: 410..446
e-value: 5.8
score: 15.8
coord: 224..260
e-value: 120.0
score: 4.3
coord: 559..595
e-value: 0.12
score: 21.5
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 375..407
e-value: 0.31
score: 11.8
coord: 485..520
e-value: 0.0013
score: 19.4
coord: 229..260
e-value: 3.9
score: 8.3
coord: 300..334
e-value: 3.5
score: 8.5
coord: 526..556
e-value: 4.1E-4
score: 21.0
coord: 746..777
e-value: 0.0088
score: 16.7
coord: 263..295
e-value: 0.078
score: 13.7
coord: 562..592
e-value: 0.072
score: 13.8
coord: 647..663
e-value: 98.0
score: 3.9
coord: 341..364
e-value: 37.0
score: 5.2
coord: 151..186
e-value: 0.98
score: 10.2
coord: 453..479
e-value: 0.25
score: 12.1
coord: 416..442
e-value: 0.083
score: 13.6
coord: 783..815
e-value: 0.18
score: 12.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 4..202
e-value: 1.1E-13
score: 53.6
coord: 366..521
e-value: 6.9E-27
score: 96.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 203..365
e-value: 1.3E-24
score: 89.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 737..900
e-value: 2.7E-14
score: 54.8
coord: 522..718
e-value: 1.7E-18
score: 68.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..52
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..41
NoneNo IPR availablePANTHERPTHR43628ACTIVATOR OF C KINASE PROTEIN 1-RELATEDcoord: 206..366
NoneNo IPR availablePANTHERPTHR43628:SF9SEL1-REPEAT-CONTAINING PROTEIN YBEQcoord: 743..895
NoneNo IPR availablePANTHERPTHR43628:SF9SEL1-REPEAT-CONTAINING PROTEIN YBEQcoord: 317..467
NoneNo IPR availablePANTHERPTHR43628ACTIVATOR OF C KINASE PROTEIN 1-RELATEDcoord: 743..895
coord: 97..257
NoneNo IPR availablePANTHERPTHR43628ACTIVATOR OF C KINASE PROTEIN 1-RELATEDcoord: 464..605
NoneNo IPR availablePANTHERPTHR43628:SF9SEL1-REPEAT-CONTAINING PROTEIN YBEQcoord: 97..257
NoneNo IPR availablePANTHERPTHR43628:SF9SEL1-REPEAT-CONTAINING PROTEIN YBEQcoord: 464..605
NoneNo IPR availablePANTHERPTHR43628:SF9SEL1-REPEAT-CONTAINING PROTEIN YBEQcoord: 206..366
NoneNo IPR availablePANTHERPTHR43628ACTIVATOR OF C KINASE PROTEIN 1-RELATEDcoord: 317..467
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..628
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 649..905
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 629..648
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 430..662
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 98..199
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 212..419
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 745..876

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4931607..4934324 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12462.t1Gvermi12462.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4931607..4934324 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12462.t1 ID=Gvermi12462.t1|Name=Gvermi12462.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=906bp
MDDHNRNIERDENRGSTNQEHNGSGNSQYGEQSVYDLSIRNQNFRESEDG
HEQTLSLEGTLESLRQRIEDDDPEATAQYADLMVSISQESPSELVYGMHL
YLRAWELGYQHSAAQITNMADILTSGTLSIRASGVHASHLYMLAGQQGYA
RALLNHGVLLLRGGPGINRNINEAVQLIASAAERGHERALINLAILIEEE
ISLEGLDIPRIVRLLEQAEDGGNQHVLNGLGHIMMNGGVGIRTDIQRAVC
LFERAIQSGSTLALRFLGTLLVGGFDEVPTDIPRAVRLYERAVENQDSIA
AELLARILVDGVGNVQSNAPRAEQLFRMAIENGSISARSSLAELLIEGAE
GVERNPPEAVRLLEDAVQLAGDTTSMMSLGLLLIEGGDGIQKNPERGMSF
LERAVAQEDANATLVLGLVLATGTDDIPRNTSRAIRLLEQAIGLGCVDAL
LCLAKMLFFGAEGVRKNPTRCVSLLERAVRAENYEAMEFLAFILSNGADG
IAADPFRAVSLYEKAIEEGNRETSLVDLGVLLFKGADGLPRDPLRAYAFF
QKAAENLEEVGMCNAAVMLVAGVDGIPKDKPRAIDLYEKAIEVKNSAMAK
VSLSMFLWVEGQTLQRAVRLCEEAVDEEYVPAFAVLALYLRIGCGFMARD
IQRAMYLCERASMDEDEATHLLTMANLCTEGENNLYVDGNAGVEAYEALL
GHEKDVTKMVWVKICLRDSYTTLPFRGWRHGVMPENEVVLNAVTLAMVNY
ASLLIDGLEGVPRNASKAIQLYRAAIEDDGCIVAMTNLAYLLCTPSLGVG
VDSDGEEAIRLLERAIGVSKPHNNVTAMLVLANYLVDDANDEHKNAHRAA
ELYGAVVGDTNDAYAFNKLYNLLACGAEGFAADGESADALLVSARECGVE
IRRGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf