Gvermi12459.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi12459.t1
Unique Name	Gvermi12459.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	339

Homology

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BLAST of Gvermi12459.t1 vs. uniprot
Match: A0A2V3IHW0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHW0_9FLOR)

HSP 1 Score: 383 bits (983), Expect = 3.330e-130
Identity = 196/311 (63.02%), Postives = 241/311 (77.49%), Query Frame = 0

Query:   28 IFGIRVSRDHILRLSAILTLRTLLTIVDLPLEETASAYLASILSSITNVTVFLALTSNYFHFEGFIGRIGSFLFPSSRKPSAFVTIYSQVVFLLGPLVSWLETAVITYEVMGIARRWETHMQRAQAQGSTFARRLLLGFAFLCLICTAAITAFLGKFHTKYAAGAATACFLLLSFSFFKDDANIVEASILCLYACVILAFGWMESQRLSDEAKAMLLISTVILTSVSMARATRFLRLTMIGFEALCEEEQAGIKWGHGSIRRSFGVLTIIALTFRTLVWSEDVRQGEYFPLLCRSAQVVAVVFLYILYSQR 338
            +FG+R SRDHILRLSAIL+LR LLT+ DLPLE TA+AY+ S+LSS+TN+ + LALTSNYFHFEG +GRIG+F FPS RKPSAF+ +Y+++VF+LGPL SW ETAVITYE+M IARRWE  MQRA   GS   RRLLL F FLC+  + AI   LG  + K  AGAATA  LLL++S+  DDAN+VEA++L LY C +L F   ESQ LSDE++AMLL+ TV+L   +M+RATRF+RL  IGFE    EE+AGI WG GS++ SFGVLTIIA+TFR L+WS++V +GEY    CR  QV+AVV LYI YSQR
Sbjct:    1 MFGVRFSRDHILRLSAILSLRALLTVFDLPLENTATAYITSLLSSMTNMAIVLALTSNYFHFEGLLGRIGAFFFPSPRKPSAFIILYARLVFVLGPLASWFETAVITYEIMSIARRWEASMQRAATDGSHVPRRLLLAFTFLCITGSVAIGVTLGLENRKVGAGAATASLLLLTYSYLNDDANVVEAAMLSLYVCTLLIFAKGESQLLSDESRAMLLVGTVVLLCTAMSRATRFVRLLAIGFEEFYREEEAGIAWGQGSVQNSFGVLTIIAITFRILIWSQEVHEGEYVAEWCRITQVIAVVILYIFYSQR 311

The following BLAST results are available for this feature:

BLAST of Gvermi12459.t1 vs. uniprot

BLAST of Gvermi12459.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IHW0_9FLOR	3.330e-130	63.02	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 260..314
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 241..259
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..31
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 315..335
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 88..107
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 129..161
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 59..63
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 188..205
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 32..37
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 336..338
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 182..187
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 211..229
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 230..240
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 206..210
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 64..87
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 162..181
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 108..128
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..11
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 38..58
None	No IPR available	TMHMM	TMhelix		coord: 290..307
None	No IPR available	TMHMM	TMhelix		coord: 162..184
None	No IPR available	TMHMM	TMhelix		coord: 239..256
None	No IPR available	TMHMM	TMhelix		coord: 188..205
None	No IPR available	TMHMM	TMhelix		coord: 212..229
None	No IPR available	TMHMM	TMhelix		coord: 317..336
None	No IPR available	TMHMM	TMhelix		coord: 12..34
None	No IPR available	TMHMM	TMhelix		coord: 119..141

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_3404	contig	ScGOVlb_3404:4924337..4925353 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi12459.t1	Gvermi12459.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_3404 4924337..4925353 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi12459.t1 ID=Gvermi12459.t1|Name=Gvermi12459.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=339bp
MNFLFSPSQRNAGIRAFAAPFTAPAFTIFGIRVSRDHILRLSAILTLRTL
LTIVDLPLEETASAYLASILSSITNVTVFLALTSNYFHFEGFIGRIGSFL
FPSSRKPSAFVTIYSQVVFLLGPLVSWLETAVITYEVMGIARRWETHMQR
AQAQGSTFARRLLLGFAFLCLICTAAITAFLGKFHTKYAAGAATACFLLL
SFSFFKDDANIVEASILCLYACVILAFGWMESQRLSDEAKAMLLISTVIL
TSVSMARATRFLRLTMIGFEALCEEEQAGIKWGHGSIRRSFGVLTIIALT
FRTLVWSEDVRQGEYFPLLCRSAQVVAVVFLYILYSQR*