Gvermi12458.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12458.t1
Unique NameGvermi12458.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length841
Homology
BLAST of Gvermi12458.t1 vs. uniprot
Match: A0A2V3IHX4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHX4_9FLOR)

HSP 1 Score: 599 bits (1544), Expect = 6.350e-199
Identity = 368/881 (41.77%), Postives = 520/881 (59.02%), Query Frame = 0
Query:   13 AARQFLSEFASGLHQ---SRDTHTNRPEHVP------KPRKPKRRMRPISVANVPAAHDNGLSSASHEG---------------LTRLSLADQSLHNEIPKLFPSSESHLQ---KSESPFLRKLQIAPSASENQVAQAPEKGT--------DSVPVPAGSFSPQISKHLKESSDDQSSPTKPEQQQHGLLSEALQNRAITHATHVRTIANDPTLFLEALQTLYQLTCISSSNSTEHDVSLLIYHTSRPTRLKYCQTVLSHLYDILRAYPVPIQRALNLSTTAADFPQPPTGAWVPFHPSHLSFRRLAEESSEVLPMSNRLKTNLEVTWDALLDMLRTYCGHKQEAAGSVDDEKVVSVINSLHPCNIDIFASRFVNLLSTHTVNVQQPTHIRLLDERFHAQSISFKKSKDIGVILHRVPQRVLEAFGDVPAHKFFARFLTGIDSARLYTALVPRFLARVLEALSRASNANSNHEFCDAVYEARLYARFLAVVMHSVNWSHSPFAISGSLSAPETFPPRKHKSGKEETSDADNLHSNVPQAAHRKEQTERQQGKQ-REETRKKHSSGKTRHPNHVRSIAT-----------------AETPGLGSHALQWRAWHLTALWQSVFNIDELITSAVSSKQITAIVAAAAVADVLLRFAAIDPVAKVSSWFREGLSAMKKLVVIDRGIDVQMPFVHILKIDLFSCDEISAQGSNWWENQGLDDNYVMKSDCSEWSAIGNMRLVQECCTSLALFRRNLADCSDTKWQKTTPRRITPRMTGSTDALSPLQTHTGRETNSTLGQKEEEKGNERDG----REEVRKEFLSRLDPRLRELMHIVVSSRPDNEEDAQKKFLRVAKTLYSEVPVTVRAVAAHLCGDEVKSRLQS 836
            +A++FLS+FAS L+    +R  H N  E  P      K  KP+ R+RPIS+ + P+A       AS                  L   SL   +L  +  K  PSS +      ++E+PFLR LQ       + + + P + +        DS+ + AGS     S   K+S  +  + + P+++  G LS+AL+ +A  HAT++R +AN+P+   EALQ ++QL   S S   +   +  ++  S   R  Y Q V   L+D+L   P PIQRALNLST+  +FP      WVP +P+HLS R L EE ++  P S RLK N+EV WD LLDMLRTYCG K+  AG+ D++  V++++S+HPCN DIFA RF++L+ST+++N   P+HIRLLD R H ++ +    +D  V+LHR+P+++L +F D+ A++F   FLT IDSARL TAL+PRFLAR++E L +A+ A+SN +FC+AV E+R++ARFLAVV+H+VNWSHSPF +SG      +   RK  + K          + V +   R++Q +    ++ R E R   SS     PN  R +                    ETPGLGSHA +WRA  L+ALWQ+V NIDELI SAVSS    A+VAA+ +AD +LR +A DPVA+ S WF   + AM  L V D    ++MP    L  DL + +++      +   +G  + YV+K D + W AIGN+RL+QEC  SLA  RR L +CSD+K +K   RRITPRMT S  A S LQ+    +  +   +KE      ++G    +E ++KEF++R+D RLRELM +V+SS+PD+EE+A+K F RVAK LY   PVTVRAVAAH+CG EV  RLQS
Sbjct:   19 SAKEFLSQFASALYSKTTTRKEHPNAEERSPPFKAQQKRGKPRIRLRPISLGDTPSADTTARREASQRSTVLSPLQQQVKRESVLDADSLRKDTLVRKWDKASPSSRNMNTLPVQNENPFLRALQEQTGGEMSALLRKPRQRSVSRTGIQSDSI-IAAGSSGGDSSASEKQS--ESFAQSHPDKEPIG-LSDALRKQAAIHATYIRAVANEPSELKEALQAIHQLPYSSVSAPDDSSNNSGVHTASTSERRSYRQAVYGELHDLLCKLPCPIQRALNLSTSTPEFPYKKANPWVPPYPAHLSARLLREEDNDATPASGRLKVNIEVAWDMLLDMLRTYCGDKRARAGTFDEQAAVNIMSSIHPCNTDIFAIRFISLVSTYSLNTDHPSHIRLLDGRLHGRASTSYAPRDHRVVLHRLPEQILASFDDLAAYRFLVLFLTRIDSARLSTALLPRFLARMMEGLRKAAAAHSNQDFCEAVLESRVHARFLAVVIHTVNWSHSPFVLSGVGGDESSAEQRKSMALKR---------NRVVKEGDRQQQNQASDDREKRPEGRTSSSSASRNRPNESRPLENNSSIISSRSDGFCSENQEETPGLGSHARKWRATLLSALWQNVLNIDELIRSAVSSGHAAAVVAASVIADDILRLSAFDPVARSSEWFESSMQAMFSLRVEDGQTKMRMPLTQFLVHDLLNSEQVGGHELGFLTIKG--EEYVLKCDANGWGAIGNLRLIQECLPSLADLRRKLIECSDSKARKRASRRITPRMTSSASAFSSLQSTATSDVKTLTSRKEAGDETSKEGMMDMQERLQKEFVARMDSRLRELMQVVISSQPDSEEEAKKSFARVAKILYPAEPVTVRAVAAHICGHEVGLRLQS 884          
The following BLAST results are available for this feature:
BLAST of Gvermi12458.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IHX4_9FLOR6.350e-19941.77Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 493..507
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 490..555
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 721..749
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 155..172
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 517..539
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..172
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 750..767
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 721..767

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4921619..4924141 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12458.t1Gvermi12458.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4921619..4924141 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12458.t1 ID=Gvermi12458.t1|Name=Gvermi12458.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=841bp
MNGHDAAAEKTFAARQFLSEFASGLHQSRDTHTNRPEHVPKPRKPKRRMR
PISVANVPAAHDNGLSSASHEGLTRLSLADQSLHNEIPKLFPSSESHLQK
SESPFLRKLQIAPSASENQVAQAPEKGTDSVPVPAGSFSPQISKHLKESS
DDQSSPTKPEQQQHGLLSEALQNRAITHATHVRTIANDPTLFLEALQTLY
QLTCISSSNSTEHDVSLLIYHTSRPTRLKYCQTVLSHLYDILRAYPVPIQ
RALNLSTTAADFPQPPTGAWVPFHPSHLSFRRLAEESSEVLPMSNRLKTN
LEVTWDALLDMLRTYCGHKQEAAGSVDDEKVVSVINSLHPCNIDIFASRF
VNLLSTHTVNVQQPTHIRLLDERFHAQSISFKKSKDIGVILHRVPQRVLE
AFGDVPAHKFFARFLTGIDSARLYTALVPRFLARVLEALSRASNANSNHE
FCDAVYEARLYARFLAVVMHSVNWSHSPFAISGSLSAPETFPPRKHKSGK
EETSDADNLHSNVPQAAHRKEQTERQQGKQREETRKKHSSGKTRHPNHVR
SIATAETPGLGSHALQWRAWHLTALWQSVFNIDELITSAVSSKQITAIVA
AAAVADVLLRFAAIDPVAKVSSWFREGLSAMKKLVVIDRGIDVQMPFVHI
LKIDLFSCDEISAQGSNWWENQGLDDNYVMKSDCSEWSAIGNMRLVQECC
TSLALFRRNLADCSDTKWQKTTPRRITPRMTGSTDALSPLQTHTGRETNS
TLGQKEEEKGNERDGREEVRKEFLSRLDPRLRELMHIVVSSRPDNEEDAQ
KKFLRVAKTLYSEVPVTVRAVAAHLCGDEVKSRLQSPLAE*
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