Gvermi12457.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12457.t1
Unique NameGvermi12457.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length155
Homology
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BLAST of Gvermi12457.t1 vs. uniprot
Match: A0A2V3ILP5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILP5_9FLOR)

HSP 1 Score: 135 bits (339), Expect = 1.510e-38
Identity = 63/88 (71.59%), Postives = 76/88 (86.36%), Query Frame = 0 
Query:    1 MTIVDRSNTNWTPWPRLAGIPQRFQIIGGVAAIMGAAAILVQVRASRATVPGTLSKEWKAATEKTFEAKERESADPVVMNPITASRKK 88
            MT+VDRSNTNWTPWPRLA IPQRFQ+IGGVAAIMGAAA+L++ R SRA VP T++KEW+ AT+    AKERE+ADP+V+NPI+ S KK
Sbjct:    1 MTVVDRSNTNWTPWPRLAAIPQRFQLIGGVAAIMGAAALLLKARTSRAPVPSTINKEWQDATDAASHAKEREAADPIVLNPISKSMKK 88
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BLAST of Gvermi12457.t1 vs. uniprot
Match: A0A7V5I8Y2_9BACT (DUF1138 domain-containing protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A7V5I8Y2_9BACT)

HSP 1 Score: 67.4 bits (163), Expect = 5.690e-12
Identity = 32/84 (38.10%), Postives = 52/84 (61.90%), Query Frame = 0 
Query:    4 VDRSNTNWTPWPRLAGIPQRFQIIGGVAAIMGAAAILVQVRASRATVPGTLSKEWKAATEKTFEAKERESADPVVMNPITASRK 87
            ++R+ T+W PWP +A  P+  Q++GGV   +  A  +V+      + P T+ ++W+A TEK    KERE+ +P V+NPI+ S K
Sbjct:    3 MNRTGTDWHPWPAVARFPKSVQLLGGVGLSLVFAYTMVEFSRRIGSRPRTVVEDWQAETEKRALQKEREAGEPTVLNPISRSFK 86
The following BLAST results are available for this feature:
BLAST of Gvermi12457.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3ILP5_9FLOR1.510e-3871.59Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7V5I8Y2_9BACT5.690e-1238.10DUF1138 domain-containing protein n=1 Tax=bacteriu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009515Protein of unknown function DUF1138PFAMPF06592DUF1138coord: 26..83
e-value: 6.1E-9
score: 35.8
IPR007836Ribosomal protein L41PFAMPF05162Ribosomal_L41coord: 130..154
e-value: 6.8E-9
score: 35.6
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..41
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 42..154
NoneNo IPR availableTMHMMTMhelixcoord: 24..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4907299..4921212 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12457.t1Gvermi12457.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4907299..4921212 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12457.t1 ID=Gvermi12457.t1|Name=Gvermi12457.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=155bp
MTIVDRSNTNWTPWPRLAGIPQRFQIIGGVAAIMGAAAILVQVRASRATV
PGTLSKEWKAATEKTFEAKERESADPVVMNPITASRKKLETCSVDGASLF
KTVGSDFRLPSVLSATRLDRVDPNHAVSIMRDKWKKKRMRRLKRKRRRMR
ARSK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009515DUF1138
IPR007836Ribosomal_L41