Gvermi12455.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12455.t1
Unique NameGvermi12455.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length244
Homology
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BLAST of Gvermi12455.t1 vs. uniprot
Match: A0A2V3IJ33_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJ33_9FLOR)

HSP 1 Score: 110 bits (276), Expect = 2.780e-26
Identity = 46/82 (56.10%), Postives = 62/82 (75.61%), Query Frame = 0 
Query:  134 NVTEVNIVYLSMCVTAITVVCLEIPFVPGCHGCETYVARIAINATHSPKENHQLDVVCNLISGSGLCDFMDDIPICPICEAL 215
            N T++N +YLS CV  I+VVC+E+P VPGCHGCETYVAR+A+  +H+PK N   D +C ++  S +C   +DIP+CPICEAL
Sbjct:  106 NSTQINTLYLSKCVALISVVCIELPIVPGCHGCETYVARLAVELSHAPKNNPVADQICKVVYSSKVCVLSEDIPVCPICEAL 187
The following BLAST results are available for this feature:
BLAST of Gvermi12455.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IJ33_9FLOR2.780e-2656.10Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 45..243
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 28..44
NoneNo IPR availableTMHMMTMhelixcoord: 28..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4903215..4903946 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12455.t1Gvermi12455.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4903215..4903946 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12455.t1 ID=Gvermi12455.t1|Name=Gvermi12455.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=244bp
MHYYRSVERETNTGLQGARIFKRKDSNIVVRCIVGAIVLCLYSLCQTRIK
PSTEFKLADIVNNHHFHIFSGTFPKSSQPDNVSTSTLQLFRSESERKKAN
ASPENLFGLLRPSNAEKELASTKLGVAAVPDLRNVTEVNIVYLSMCVTAI
TVVCLEIPFVPGCHGCETYVARIAINATHSPKENHQLDVVCNLISGSGLC
DFMDDIPICPICEALSEDPDAETESRTMYKRTSSHHDRYILQR*
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