Gvermi12448.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12448.t1
Unique NameGvermi12448.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length254
Homology
BLAST of Gvermi12448.t1 vs. uniprot
Match: A0A2V3IJ24_9FLOR (Chlorophyll synthase, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJ24_9FLOR)

HSP 1 Score: 470 bits (1209), Expect = 8.720e-165
Identity = 227/252 (90.08%), Postives = 238/252 (94.44%), Query Frame = 0
Query:    1 MVLAGPLLTGYTQTLNDWCDRDIDAINEPQRPIPSGAITEREVKTQLVALLVAGIALSAAIDVWTAHDWPVNTALTLFGSFIAYIYSEPPLKLKQNGWLGCYALGASYISLPWWCGHAAFGQLDWKVMVLTLFYSFAGLGIAIVNDFKSVEGDRATGMQSLPVMFGIDTAKWICAGMIDVFQLLVAAVIYAIGEHKYAAAILALVIPQVVFQFQYLLKDPIKNDVKYQAAAQPFLVIGILVTALAVGHHGPL 252
            M LAGPLLTGYTQTLNDW DRDIDAINEPQRPIPSGAI+E EVKTQLVALLVAGI LSAAIDVWT H+WPVNTALTLFGSFIAYIYS PPLKLKQNGWLGCYALGASYISLPWWCGHAAFG+LDWKVM+LTLFYSFAGLGIAIVNDFKSVEGDR TGMQSLPVMFGID AKWIC GMIDVFQLLVAA+IYA+GE KYAAAILAL++PQV  QF+Y L DP+KNDVKYQAAAQPFLVIGILV+ALAVGHHGPL
Sbjct:  140 MFLAGPLLTGYTQTLNDWYDRDIDAINEPQRPIPSGAISENEVKTQLVALLVAGILLSAAIDVWTHHEWPVNTALTLFGSFIAYIYSAPPLKLKQNGWLGCYALGASYISLPWWCGHAAFGELDWKVMLLTLFYSFAGLGIAIVNDFKSVEGDRQTGMQSLPVMFGIDAAKWICVGMIDVFQLLVAAIIYAVGEDKYAAAILALLLPQVFLQFKYFLNDPVKNDVKYQAAAQPFLVIGILVSALAVGHHGPL 391          
BLAST of Gvermi12448.t1 vs. uniprot
Match: R7QL79_CHOCR (Chlorophyll a synthase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QL79_CHOCR)

HSP 1 Score: 414 bits (1064), Expect = 1.800e-143
Identity = 195/252 (77.38%), Postives = 217/252 (86.11%), Query Frame = 0
Query:    1 MVLAGPLLTGYTQTLNDWCDRDIDAINEPQRPIPSGAITEREVKTQLVALLVAGIALSAAIDVWTAHDWPVNTALTLFGSFIAYIYSEPPLKLKQNGWLGCYALGASYISLPWWCGHAAFGQLDWKVMVLTLFYSFAGLGIAIVNDFKSVEGDRATGMQSLPVMFGIDTAKWICAGMIDVFQLLVAAVIYAIGEHKYAAAILALVIPQVVFQFQYLLKDPIKNDVKYQAAAQPFLVIGILVTALAVGHHGPL 252
            M LAGPLLTGYTQ +NDW DR+IDAINEP RPIP+G +TE EVKTQ+  LL AG+AL+A +DVW AH+WPVN  LT+FG F+AYIYS PPLKLKQNGW G YALGASYISLPWW G A FG LDWK MVLTLFYSFAGLGIAI+NDFKSVEGDRATGMQSLPVMFGIDTAKWIC GMID+FQLLVA +++ +GE  YAAAI+ALV PQ+  Q +Y LKDP+K DVKYQA+AQPFLVIGILV  LAVGHHGPL
Sbjct:   91 MFLAGPLLTGYTQVINDWYDREIDAINEPYRPIPAGLVTENEVKTQIGVLLAAGLALAAGLDVWAAHEWPVNFTLTVFGVFVAYIYSAPPLKLKQNGWTGSYALGASYISLPWWAGQALFGTLDWKTMVLTLFYSFAGLGIAIINDFKSVEGDRATGMQSLPVMFGIDTAKWICVGMIDIFQLLVAGILFGVGEKGYAAAIVALVAPQMFLQQKYFLKDPVKYDVKYQASAQPFLVIGILVAGLAVGHHGPL 342          
BLAST of Gvermi12448.t1 vs. uniprot
Match: UPI001E1DEA48 (LOW QUALITY PROTEIN: chlorophyll synthase, chloroplastic-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DEA48)

HSP 1 Score: 389 bits (1000), Expect = 4.090e-134
Identity = 182/252 (72.22%), Postives = 206/252 (81.75%), Query Frame = 0
Query:    1 MVLAGPLLTGYTQTLNDWCDRDIDAINEPQRPIPSGAITEREVKTQLVALLVAGIALSAAIDVWTAHDWPVNTALTLFGSFIAYIYSEPPLKLKQNGWLGCYALGASYISLPWWCGHAAFGQLDWKVMVLTLFYSFAGLGIAIVNDFKSVEGDRATGMQSLPVMFGIDTAKWICAGMIDVFQLLVAAVIYAIGEHKYAAAILALVIPQVVFQFQYLLKDPIKNDVKYQAAAQPFLVIGILVTALAVGHHGPL 252
            MVLAGPLLTGYTQ +NDW DRDIDAINEP RPIPSG +TE +VK Q+  LL  G  +S  +DVW+ H+WPVN ALT FG FIA+IYS PPLKLKQNGW G Y+LGASYISLPWW G A FG LDWK MVLTLFYS AGLGIA++NDFKS+EGDRATGMQSLPVMFGIDTAKWI  G ID+FQLLVA +++++GE  YA AI+ALV PQ+  Q    LKDP+ NDVKYQA+AQPFLV+GI V  LA GHHGPL
Sbjct:   66 MVLAGPLLTGYTQVINDWYDRDIDAINEPYRPIPSGLVTETDVKAQVGVLLSLGFLVSGVLDVWSGHEWPVNVALTTFGVFIAFIYSAPPLKLKQNGWAGSYSLGASYISLPWWAGQAVFGTLDWKTMVLTLFYSIAGLGIAVINDFKSIEGDRATGMQSLPVMFGIDTAKWITVGTIDIFQLLVACILFSVGEKAYAGAIVALVAPQIYLQVTTFLKDPVANDVKYQASAQPFLVLGIFVAGLARGHHGPL 317          
BLAST of Gvermi12448.t1 vs. uniprot
Match: A0A7S0BQL7_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BQL7_9RHOD)

HSP 1 Score: 383 bits (983), Expect = 9.690e-131
Identity = 184/249 (73.90%), Postives = 208/249 (83.53%), Query Frame = 0
Query:    1 MVLAGPLLTGYTQTLNDWCDRDIDAINEPQRPIPSGAITEREVKTQLVALLVAGIALSAAIDVWTAHDWPVNTALTLFGSFIAYIYSEPPLKLKQNGWLGCYALGASYISLPWWCGHAAFGQLDWKVMVLTLFYSFAGLGIAIVNDFKSVEGDRATGMQSLPVMFGIDTAKWICAGMIDVFQLLVAAVIYAIGEHKYAAAILALVIPQVVFQFQYLLKDPIKNDVKYQAAAQPFLVIGILVTALAVGHH 249
            M++AGP LTG+TQT+NDW DR+IDAINEP RPIPSG I+E EVK Q+  LLVAG+A S  +D W  H++PV   LT+FG F +YIYS PPLKLKQNGWLG YALGASYI+LPWW G A FG LDWKVMVLTLFYSFAGLGIAIVNDFKSVEGDRA G+ SLPV FGIDTAKWIC GMIDVFQLLVA ++  +GE  YAAAI  LV PQ+ FQ ++ LKDP+KNDVKYQA+AQPFLV+GILVT LAVGHH
Sbjct:  122 MIMAGPFLTGFTQTINDWYDREIDAINEPYRPIPSGKISEGEVKAQIWFLLVAGMATSYGLDRWAEHEFPVMLTLTVFGCFTSYIYSAPPLKLKQNGWLGNYALGASYIALPWWAGQALFGTLDWKVMVLTLFYSFAGLGIAIVNDFKSVEGDRALGLDSLPVAFGIDTAKWICVGMIDVFQLLVAGILAYVGELPYAAAICGLVAPQMYFQQKFFLKDPVKNDVKYQASAQPFLVLGILVTGLAVGHH 370          
BLAST of Gvermi12448.t1 vs. uniprot
Match: A0A6T6MCL3_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A6T6MCL3_9RHOD)

HSP 1 Score: 380 bits (977), Expect = 1.500e-129
Identity = 178/252 (70.63%), Postives = 210/252 (83.33%), Query Frame = 0
Query:    1 MVLAGPLLTGYTQTLNDWCDRDIDAINEPQRPIPSGAITEREVKTQLVALLVAGIALSAAIDVWTAHDWPVNTALTLFGSFIAYIYSEPPLKLKQNGWLGCYALGASYISLPWWCGHAAFGQLDWKVMVLTLFYSFAGLGIAIVNDFKSVEGDRATGMQSLPVMFGIDTAKWICAGMIDVFQLLVAAVIYAIGEHKYAAAILALVIPQVVFQFQYLLKDPIKNDVKYQAAAQPFLVIGILVTALAVGHHGPL 252
            M+++GPLLTGYTQT+NDW DRDIDAINEP RPIPSG ITE +VK Q+  LL  G+A +  +DVW+ H+ P      +FGSFI+YIYS PPLKLKQNGWLG YALGASYISLPWW G   FG L+WK MVLT+FYS AGLGIAIVNDFKS+EGDR  G++SLPV FG+DTAKWIC G IDVFQ LVA V++AIGE  YAAA++AL++PQ+V Q +Y LKDPI+NDVKYQA+AQPFLV+GILVT LA+G+HGPL
Sbjct:  138 MIMSGPLLTGYTQTINDWYDRDIDAINEPYRPIPSGRITEGQVKAQIAVLLGGGLATAYGLDVWSQHETPWILLTAIFGSFISYIYSAPPLKLKQNGWLGNYALGASYISLPWWAGQLVFGSLEWKTMVLTMFYSLAGLGIAIVNDFKSIEGDRKMGLKSLPVEFGVDTAKWICVGTIDVFQALVACVLFAIGETPYAAALVALIVPQMVLQQKYFLKDPIENDVKYQASAQPFLVLGILVTGLAIGNHGPL 389          
BLAST of Gvermi12448.t1 vs. uniprot
Match: A0A5J4Z6E9_PORPP (Chlorophyll synthase, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z6E9_PORPP)

HSP 1 Score: 379 bits (973), Expect = 7.160e-129
Identity = 176/252 (69.84%), Postives = 209/252 (82.94%), Query Frame = 0
Query:    1 MVLAGPLLTGYTQTLNDWCDRDIDAINEPQRPIPSGAITEREVKTQLVALLVAGIALSAAIDVWTAHDWPVNTALTLFGSFIAYIYSEPPLKLKQNGWLGCYALGASYISLPWWCGHAAFGQLDWKVMVLTLFYSFAGLGIAIVNDFKSVEGDRATGMQSLPVMFGIDTAKWICAGMIDVFQLLVAAVIYAIGEHKYAAAILALVIPQVVFQFQYLLKDPIKNDVKYQAAAQPFLVIGILVTALAVGHHGPL 252
            MV++GP LTG+TQT+NDW DRDIDAINEP RPIPSG ITE +VK Q+V LL AG+  +  +DVW  H+ P      LFGS I+YIYS PPLKLKQNGW+G YALGASYISLPWW G   FG LDWK M+LT+FYSFAGLGIAIVNDFKS+EGDRA G+ SLPV FG++ AKWIC G ID+FQ+LVAAV++ IGE+ YAAA+ AL++PQ+ FQ ++ LKDPI+NDVKYQAAAQPFLV+GILVT LA+GHHGP+
Sbjct:  143 MVMSGPFLTGFTQTINDWYDRDIDAINEPYRPIPSGRITEGQVKAQIVLLLGAGLGTAYGLDVWAQHETPYVLIAALFGSLISYIYSAPPLKLKQNGWIGNYALGASYISLPWWAGQLVFGTLDWKTMLLTMFYSFAGLGIAIVNDFKSIEGDRAMGLNSLPVAFGVEKAKWICVGTIDIFQVLVAAVLFGIGENTYAAALTALILPQMYFQQKFFLKDPIENDVKYQAAAQPFLVLGILVTGLALGHHGPI 394          
BLAST of Gvermi12448.t1 vs. uniprot
Match: A0A1X6PD57_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PD57_PORUM)

HSP 1 Score: 377 bits (967), Expect = 1.210e-127
Identity = 175/252 (69.44%), Postives = 206/252 (81.75%), Query Frame = 0
Query:    1 MVLAGPLLTGYTQTLNDWCDRDIDAINEPQRPIPSGAITEREVKTQLVALLVAGIALSAAIDVWTAHDWPVNTALTLFGSFIAYIYSEPPLKLKQNGWLGCYALGASYISLPWWCGHAAFGQLDWKVMVLTLFYSFAGLGIAIVNDFKSVEGDRATGMQSLPVMFGIDTAKWICAGMIDVFQLLVAAVIYAIGEHKYAAAILALVIPQVVFQFQYLLKDPIKNDVKYQAAAQPFLVIGILVTALAVGHHGPL 252
            M+L+GPL+TG+TQT+NDW DRD+DAINEP RPIPSG ITE +VK Q+  LLVAG++L+  +DVW AH+ P  T    FG  +AYIYS PPLKLKQNGW G YALGASYISLPWW G   FG LDWKVMVLTLFYSFAGLGIA++NDFKS+EGDR  G+ SLPV FG+DTAK+I  GMID+FQ LVAA+++ +GE  YAA I AL++PQV  QF+Y L DP+K DVKYQA+AQPFLV+GILV  LAVGHHGPL
Sbjct:  165 MILSGPLMTGFTQTVNDWYDRDLDAINEPYRPIPSGRITEGQVKAQMWVLLVAGMSLAIGLDVWAAHETPTVTLTAAFGVIVAYIYSAPPLKLKQNGWTGTYALGASYISLPWWAGQNVFGTLDWKVMVLTLFYSFAGLGIAVINDFKSIEGDRELGLTSLPVQFGVDTAKYITVGMIDIFQALVAAILFYVGERTYAAVIAALIVPQVALQFKYFLVDPLKYDVKYQASAQPFLVLGILVAGLAVGHHGPL 416          
BLAST of Gvermi12448.t1 vs. uniprot
Match: A0A7S1XF48_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XF48_9RHOD)

HSP 1 Score: 371 bits (952), Expect = 4.470e-126
Identity = 175/252 (69.44%), Postives = 204/252 (80.95%), Query Frame = 0
Query:    1 MVLAGPLLTGYTQTLNDWCDRDIDAINEPQRPIPSGAITEREVKTQLVALLVAGIALSAAIDVWTAHDWPVNTALTLFGSFIAYIYSEPPLKLKQNGWLGCYALGASYISLPWWCGHAAFGQLDWKVMVLTLFYSFAGLGIAIVNDFKSVEGDRATGMQSLPVMFGIDTAKWICAGMIDVFQLLVAAVIYAIGEHKYAAAILALVIPQVVFQFQYLLKDPIKNDVKYQAAAQPFLVIGILVTALAVGHHGPL 252
            M +AGPLLTG+TQT+NDW DR++DAINEP RPIPSGAI+E EVK Q++ LL A + +S A+D W  HD PV   LTLFG  ++Y YS PPLK KQNGW+G YALGASYISLPWW G A FGQLDWKVMV TLFYSFAGLGIA VNDFKS+EGD   G++SLPV FGIDTAKWI AGMID+FQ L A VI ++GE  Y  A+L L++PQ+ FQ +YLL DP+K DVKYQA+AQPFLV+GILV  LA+GHHGPL
Sbjct:  116 MFMAGPLLTGFTQTMNDWYDREMDAINEPYRPIPSGAISEGEVKGQILGLLAASLGVSVALDQWCQHDTPVVLMLTLFGILVSYNYSAPPLKFKQNGWIGTYALGASYISLPWWAGQAVFGQLDWKVMVFTLFYSFAGLGIATVNDFKSIEGDAKLGLKSLPVAFGIDTAKWIAAGMIDIFQFLAAGVILSVGETAYGLAMLGLLMPQMYFQQKYLLNDPVKYDVKYQASAQPFLVMGILVAGLAIGHHGPL 367          
BLAST of Gvermi12448.t1 vs. uniprot
Match: K9WV73_9NOST (Chlorophyll synthase n=3 Tax=Cylindrospermum TaxID=56106 RepID=K9WV73_9NOST)

HSP 1 Score: 366 bits (940), Expect = 1.570e-124
Identity = 175/250 (70.00%), Postives = 208/250 (83.20%), Query Frame = 0
Query:    1 MVLAGPLLTGYTQTLNDWCDRDIDAINEPQRPIPSGAITEREVKTQLVALLVAGIALSAAIDVWTAHDWPVNTALTLFGSFIAYIYSEPPLKLKQNGWLGCYALGASYISLPWWCGHAAFGQLDWKVMVLTLFYSFAGLGIAIVNDFKSVEGDRATGMQSLPVMFGIDTAKWICAGMIDVFQLLVAAVIYAIGEHKYAAAILALVIPQVVFQFQYLLKDPIKNDVKYQAAAQPFLVIGILVTALAVGHHG 250
            M+L+GPLL GYTQTLND+ DR+IDAINEP RPIPSGAI+ER+V TQ+V L ++GI L+  +DVW  H++P  TAL +FG FIAYIYS PPLKLKQNGWLG YALGASYI+LPWW GHA FG L+WK++VLTLFYS AGLGIAIVNDFKSVEGDR  G+QSLPVMFGI TA WIC  MID+FQ LVAA + +I E+ YAA ++ L+IPQ+  Q  Y L+DP+ NDVKYQA+AQPFLV+G+LVT LA+GH G
Sbjct:   98 MLLSGPLLAGYTQTLNDYYDREIDAINEPYRPIPSGAISERQVITQIVLLFLSGIGLAFVLDVWAGHEFPNVTALAVFGCFIAYIYSAPPLKLKQNGWLGNYALGASYIALPWWAGHALFGDLNWKIVVLTLFYSLAGLGIAIVNDFKSVEGDRQLGLQSLPVMFGITTASWICVVMIDLFQGLVAAYLVSIHENLYAAILVLLIIPQITLQDMYFLRDPVANDVKYQASAQPFLVLGMLVTGLALGHAG 347          
BLAST of Gvermi12448.t1 vs. uniprot
Match: Q3M7T8_TRIV2 (Chlorophyll synthase n=9 Tax=Nostocaceae TaxID=1162 RepID=Q3M7T8_TRIV2)

HSP 1 Score: 365 bits (938), Expect = 2.170e-124
Identity = 174/250 (69.60%), Postives = 209/250 (83.60%), Query Frame = 0
Query:    1 MVLAGPLLTGYTQTLNDWCDRDIDAINEPQRPIPSGAITEREVKTQLVALLVAGIALSAAIDVWTAHDWPVNTALTLFGSFIAYIYSEPPLKLKQNGWLGCYALGASYISLPWWCGHAAFGQLDWKVMVLTLFYSFAGLGIAIVNDFKSVEGDRATGMQSLPVMFGIDTAKWICAGMIDVFQLLVAAVIYAIGEHKYAAAILALVIPQVVFQFQYLLKDPIKNDVKYQAAAQPFLVIGILVTALAVGHHG 250
            M+L+GPLLTGYTQTLND+ DR+IDAINEP RPIPSGAI+  +V TQ+VAL +AGIA++  +D+W  H++P  T L LFGSFIA+IYS PPLKLKQNGWLG YALGASYI+LPWW GHA FG+L+WK+ +LTL YS AGLGIAIVNDFKSVEGDR  G+QSLPVMFGI+TA WIC  MIDVFQ L+AA +  I E+ YAA ++ L+IPQ+ FQ  Y L+DP+KNDVKYQA+AQPFLV+G+LV  LA+GH G
Sbjct:   87 MLLSGPLLTGYTQTLNDFYDREIDAINEPYRPIPSGAISVPQVVTQIVALFLAGIAVAFTLDLWAGHEFPNVTVLALFGSFIAFIYSAPPLKLKQNGWLGNYALGASYIALPWWAGHALFGELNWKIAILTLIYSLAGLGIAIVNDFKSVEGDRQLGLQSLPVMFGINTAAWICVVMIDVFQGLIAAYLVTIHENLYAAILVLLIIPQITFQDMYFLRDPLKNDVKYQASAQPFLVLGMLVAGLALGHAG 336          
The following BLAST results are available for this feature:
BLAST of Gvermi12448.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IJ24_9FLOR8.720e-16590.08Chlorophyll synthase, chloroplastic n=1 Tax=Gracil... [more]
R7QL79_CHOCR1.800e-14377.38Chlorophyll a synthase n=1 Tax=Chondrus crispus Ta... [more]
UPI001E1DEA484.090e-13472.22LOW QUALITY PROTEIN: chlorophyll synthase, chlorop... [more]
A0A7S0BQL7_9RHOD9.690e-13173.90Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A6T6MCL3_9RHOD1.500e-12970.63Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A5J4Z6E9_PORPP7.160e-12969.84Chlorophyll synthase, chloroplastic n=1 Tax=Porphy... [more]
A0A1X6PD57_PORUM1.210e-12769.44Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S1XF48_9RHOD4.470e-12669.44Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
K9WV73_9NOST1.570e-12470.00Chlorophyll synthase n=3 Tax=Cylindrospermum TaxID... [more]
Q3M7T8_TRIV22.170e-12469.60Chlorophyll synthase n=9 Tax=Nostocaceae TaxID=116... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000537UbiA prenyltransferase familyPFAMPF01040UbiAcoord: 2..218
e-value: 1.5E-37
score: 129.2
NoneNo IPR availableGENE3D1.20.120.1780UbiA prenyltransferasecoord: 127..249
e-value: 4.6E-6
score: 28.6
NoneNo IPR availablePANTHERPTHR42723CHLOROPHYLL SYNTHASEcoord: 1..248
NoneNo IPR availablePANTHERPTHR42723:SF1CHLOROPHYLL SYNTHASE, CHLOROPLASTICcoord: 1..248
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 145..171
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 66..70
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 99..119
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 198..217
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 120..124
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 88..98
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 71..87
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 248..253
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 125..144
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 229..247
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 193..197
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 172..192
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..46
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 218..228
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 47..65
NoneNo IPR availableTMHMMTMhelixcoord: 125..144
NoneNo IPR availableTMHMMTMhelixcoord: 198..217
NoneNo IPR availableTMHMMTMhelixcoord: 172..194
NoneNo IPR availableTMHMMTMhelixcoord: 230..252
NoneNo IPR availableTMHMMTMhelixcoord: 47..64
NoneNo IPR availableTMHMMTMhelixcoord: 98..120
NoneNo IPR availableTMHMMTMhelixcoord: 69..86
IPR006372Bacteriochlorophyll/chlorophyll synthetaseTIGRFAMTIGR01476TIGR01476coord: 1..247
e-value: 4.6E-94
score: 313.0
IPR006372Bacteriochlorophyll/chlorophyll synthetaseCDDcd13958PT_UbiA_chlorophyllcoord: 1..243
e-value: 9.73706E-116
score: 330.731
IPR044878UbiA prenyltransferase superfamilyGENE3D1.10.357.140UbiA prenyltransferasecoord: 1..124
e-value: 6.3E-22
score: 79.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4843761..4844522 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12448.t1Gvermi12448.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4843761..4844522 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12448.t1 ID=Gvermi12448.t1|Name=Gvermi12448.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=254bp
MVLAGPLLTGYTQTLNDWCDRDIDAINEPQRPIPSGAITEREVKTQLVAL
LVAGIALSAAIDVWTAHDWPVNTALTLFGSFIAYIYSEPPLKLKQNGWLG
CYALGASYISLPWWCGHAAFGQLDWKVMVLTLFYSFAGLGIAIVNDFKSV
EGDRATGMQSLPVMFGIDTAKWICAGMIDVFQLLVAAVIYAIGEHKYAAA
ILALVIPQVVFQFQYLLKDPIKNDVKYQAAAQPFLVIGILVTALAVGHHG
PLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000537UbiA_prenyltransferase
IPR006372Chl_synth
IPR044878UbiA_sf