Gvermi12442.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12442.t1
Unique NameGvermi12442.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length768
Homology
BLAST of Gvermi12442.t1 vs. uniprot
Match: R7QKF5_CHOCR (Uncharacterized protein n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7QKF5_CHOCR)

HSP 1 Score: 409 bits (1050), Expect = 5.550e-123
Identity = 269/811 (33.17%), Postives = 408/811 (50.31%), Query Frame = 0
Query:   79 EDIWSSLFCDNFD------TMMDDSLDVQNLRDETNILEDA--ERVMHSRQGGLREWDYGSPFQQFSIDIDGINKILGRRFIRETNSILDKVTKEIQQEG------TEGVLTATS------------LTRLSILNVFLPEHVLQKIVSNVNRVLKHKCKRETTPFEITGVLILHVLAASYSSTVGTITAKRNRDFFFQMEIESGSYSEIWAALSCTDERRQRVEQFGDGWCNYPPRANSMITELEDELAAVNRLFLYVPGVAIFSLDDDHQRLRSRSVAQLTNLSHVNNLQKALGPVNNAICSALNPVFLASHYSRPGEKITDVWERLIRLIQGVPTAGPVRPMVDAIFASDRRYNSKATIEYINERIGATGIGMHKRSLDYPF--------------------------------------------CIRRWS------------------HSFTLIPKAGY--ESPKSAAEREIFHFISADSVSQTSPSGNRDNNVMDTVARLKVRQVLSNVDEVTLLQSEDPGWFLGRAFQLTSRTSQAFLRAICEDYETNTEALSFLISGKQM---------DYKQHEEAVTIV---------MFATAE-----------NLQNKTKSEILM--------LLSSVGHTLSQALRKSQLIDKVMELRSRVHNGNLKLTSTAQQTLSPSQHKEANKKKLLDGLYLASLSSWIMKPLVSTPGMKEGNFNESQVLKALPSFFECN--VVVNGSSLYSENSELHD--QKYKIEYIRTTGLISSRRDPMISDSPDAVLCFTDCDEAQHVRAVEIKTMTSLNNV 758
            ED+WS +F D  +       +   +  V       +I ED   ER ++ ++GGL++W Y SPF +  + +D ++ +L  RFI E NSILD V +E+          T   +T +S            L+RLS+L  F+P+ +L+K+ +  NR L  + ++ TT  E+ G+L+LHVL ASY+     +   +  DFFF M + +  Y ++W+AL+   E+R  V+    GWC    R  S+IT++E E+AAVNR  LY+PG  + SLDDDH R+ SR+V+ L+ L   NN +K LGPV N + SAL  VF A H++R GEK+   WERL  L+QG  T G ++PM DAIFA+DR YN+K T+ ++++ +GA+ +G HKR + YPF                                            C+ R S                   SFT++P + +  + P S    E   F +   VS   P G +   V++T    +V Q L+ +  +T  QSEDP WFL RAF+ TSRT  +FL  +  D+E +  +L++ + GKQ+         D+   E+ + +          M   AE            L+  ++S I +        +L      LS A  K+ L++ V++L++ +  G ++L      ++S S        K+L  L  ASL +W+MKPLVST GMKEG+ NE +VLKA+PSF             +++     H   +K  I +I + GL+ S+   MI+DSPD +L   +  E   V A EIKTMT+L  V
Sbjct:  120 EDLWSGIFHDYDEERCALGALHAPTSTVDAHMSGGDITEDLLEERAVNHQEGGLQDWTYESPFAEVEVIVDEVDSVLEVRFITEANSILDNVLEEVNSRESACPHETMDSMTVSSRNDCSTPRQVKPLSRLSVLRTFIPDSLLEKLKAVANRALHSRGQKLTTVQELLGLLVLHVLCASYNEGPSVVCGAKMSDFFFHMGLSAARYRQVWSALTGCREKRTAVDYSTTGWCRTASRTTSLITDIESEVAAVNRELLYIPGATVLSLDDDHLRMASRAVSSLSFLQQHNNPKKGLGPVGNTLGSALTSVFFACHFTRRGEKLLHTWERLAPLLQGASTTGALKPMADAIFAADRGYNTKETLNFVSKTLGASLLGTHKRDMTYPFVFGSGAITRRSKGMVVSEKGCRAVYVATLKSNLSVRRSGRELEACLYRESCSGRIAAMIHNNRRLFKSRSFTIVPHSRFRGQEPLSVLAEEQVIFDADRRVSL--PQGEQSAKVLNTPGSNQVDQALARIKILTFNQSEDPVWFLLRAFRFTSRTGHSFLATVTRDFENHVSSLAWALRGKQLAVGSDTLPQDHSSCEQLLRVKWECVCKLFGMRLGAEPQPSERRDLALRLERYSRSRINLFNRNDLQQMLGGFARGLSGAPSKTVLVNAVLQLQADIGAGTVELDDDGADSVSLSASLTERASKILQKLREASLHAWVMKPLVSTAGMKEGSRNEIEVLKAIPSFLSKTRGAYARTRGVFNAVEYAHSDIRKIVIRHIPSVGLVESKSSTMIADSPDGILACKNEIEESFVCAAEIKTMTALTTV 928          
BLAST of Gvermi12442.t1 vs. uniprot
Match: R7QLD7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLD7_CHOCR)

HSP 1 Score: 212 bits (540), Expect = 9.130e-61
Identity = 102/177 (57.63%), Postives = 128/177 (72.32%), Query Frame = 0
Query:  242 KRNRDFFFQMEIESGSYSEIWAALSCTDERRQRVEQFGDGWCNYPPRANSMITELEDELAAVNRLFLYVPGVAIFSLDDDHQRLRSRSVAQLTNLSHVNNLQKALGPVNNAICSALNPVFLASHYSRPGEKITDVWERLIRLIQGVPTAGPVRPMVDAIFASDRRYNSKATIEYINE 418
            ++ + F F+ +I    Y E+W+ALS T  +R+  EQ   GW N P   N++IT +E ELAA+NR  ++V GV I+S+DDDH RL SR+V  LTNLS V N +KALGPVNNA CSAL   F+ASHYSRP EKIT VW RL++LIQGVPT G +RPMVD+IFASDR YN   TI ++NE
Sbjct:   11 RKTKHFSFRCKISGSRYKEVWSALSGTKRKREGFEQSECGWLNKPVAGNALITYMEGELAAINRRLVHVEGVTIYSVDDDHNRLSSRAVLHLTNLSQVTNPKKALGPVNNAACSALTHAFIASHYSRPHEKITHVWHRLVQLIQGVPTVGALRPMVDSIFASDRGYNEVETISFLNE 187          
BLAST of Gvermi12442.t1 vs. uniprot
Match: R7Q9D7_CHOCR (EF-hand domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9D7_CHOCR)

HSP 1 Score: 189 bits (481), Expect = 9.440e-47
Identity = 187/758 (24.67%), Postives = 297/758 (39.18%), Query Frame = 0
Query:   43 ISEQELRQLR-VESYLGYAAGGKLVHSNAQDALQIAVEDIWSSLFCD----NFDTMMDDSLDVQN---LRDETNILEDAERVMHSRQGGLREWDYGSPFQQFSIDIDGINKILGRRFIRETNSILDKVTKEIQQEGTEGVLTATS---LTRLSILNVFLPEHVLQKIVSNVNRVLKHKCKRETTPFEITGVLILHVLAASYSSTVGTITAKRNRDFFFQMEIESGSYSEIWAALSCTDERRQRVEQFGDGWCNYPPRANSMITELEDELAAVNRLFLYVPGVAIFSLDDDHQRLRSRSVAQLTNLSHVNNLQKALGPVNNAICSALNPVFLASHYSRPGEKITDVWERLIRLIQGVPTAGPVRPMVDAIFASDRRYNSKATIEYINERIGATGIGMHKRSLDYPF----------------------------------------------CIRRWSHS------------------FTLIPKAGYESPKSAAEREIFHFISAD----SVSQTSPSGNRDNNVMDTVARLKVRQVLSNVDEVTLLQSEDPGWFLGRAFQLTSRTSQAFLRAICEDYETNTEALSFLISGKQM------------DYKQH-----EEAVTIVMFATAE--------------------NLQNKTKSEILMLLSSVGHTLSQALRKSQLIDKVMELRSRVHNGNLKLTSTAQQTLSPSQHKEANKKKLLDGLYLASLSSWIMKPLVSTPGMKEGNFNESQVLKALPSFFE 684
            IS+QE+R LR  ++   Y A G    S A        ED+ S +F D     F     + + V+    LR   +  +   +    R GGL  W Y SPF + ++ +D +N  L  RF+ E + +L KV  +I   G  G  +A     +T LS L  F+ + +L+K+    NRVL    ++ T+  E+ G++I+HVL A+Y  +  TI                                                                                                                  C A             GEK+   WERL++L+QGV T G +RPM  AIFA+DR YNSK TIE+I++ +GA+ +G HKR L +PF                                              C+ R S S                  FT++ +  Y +  +  + E    +  +    +VS   P+ +  + +    A+ +V+QVL+ V  +T LQSEDP WFL RAF+ TSRTS  F++AI  DY T    L++L+ G  +            + ++H     E  + +     A+                     + + TKS++  +L+     L   + KS L+  V +L+  V    + L  + ++  SP +    +  K+   L  ASL +W+MKPL++T GM+EG  NE ++++A+P F +
Sbjct:  220 ISDQEIRSLRHSQNMTSYCASGG--ESGAP-----LWEDLHSRIFHDFNGERFSAGPWEEVHVEEERCLRSAMSFDDLQAKKNAQRHGGLPMWHYESPFAEVTVRVDDVNDTLEHRFLEEAHDVLRKVKADIVGRGDLGDDSAKERDVVTPLSCLQSFVSDCLLEKLSYGANRVLHQNRQKGTSKEELLGLIIIHVLCAAYDESPSTI------------------------------------------------------------------------------------------------------------------CDA-------------GEKLIHTWERLVQLLQGVSTTGSLRPMPGAIFAADRGYNSKVTIEFISDVLGASLLGTHKRDLWFPFVFGDGPITRRHRGMVVSERGCRAVYTARLKEGPSSSRASNLRAVEACVYRESCSGRIAALVHNNGALFPSRCFTIVCRDSYRAESAVRKLEAALIVYDEPWKTAVSTQRPTRSSSHAIPRVSAKSRVQQVLAQVRCLTYLQSEDPVWFLLRAFRFTSRTSFGFVQAIARDYGTRINGLAWLLQGSVLTPGTEALSEEVEEVREHIKMKWESIIAVFGLRLADLPVTSSRRTVAARLRGMSATRITSSTKSDLQEILAVFDRALDGRVPKSSLVAAVRQLKIDVAADTVDLDGSEREDASPEELLIQSAAKVSHALRDASLHAWVMKPLIATAGMREGTRNEDKIVEAIPEFMK 843          
BLAST of Gvermi12442.t1 vs. uniprot
Match: A0A2V3ITK4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITK4_9FLOR)

HSP 1 Score: 146 bits (368), Expect = 8.590e-36
Identity = 80/182 (43.96%), Postives = 114/182 (62.64%), Query Frame = 0
Query:  578 KTKSEILMLLSSVGHTLSQALRKSQLIDKVMELRSRVHNGNLKLTSTAQQTLSPSQHKEANKKKLLDGLYLASLSSWIMKPLVSTPGMKEGNFNESQVLKALPSFFECNVVVNGSSLYSENSELHDQKYKIEYIRTTGLISSRRDPMISDSPDAVLCFTDCDEAQHVRAVEIKTMTSLNNVD 759
            KTK+E++  +S +GH +S   RK ++++K++    +V  G + L     + L+  +   A KKKLL+ LY  SL+SW+MKPLVST GMKEG+ NE QVL  L +FF+ + V    S   +       KY+ +YIRT GLISSR   MISDSPDA++ + D  EA+HV A EIKTM ++   +
Sbjct:   16 KTKTELVAGMSRIGHPISSTQRKGEIVEKILLFLKQVQTGEVVLVENEAEELTAEEQVIAAKKKLLEVLYKRSLNSWVMKPLVSTVGMKEGSLNEKQVLIELSTFFDSHNVQEWLSTKMKGDTF---KYRADYIRTIGLISSRSYLMISDSPDALMVYLDKQEARHVCAFEIKTMNTVRTTE 194          
BLAST of Gvermi12442.t1 vs. uniprot
Match: A0A2V3IP41_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP41_9FLOR)

HSP 1 Score: 110 bits (275), Expect = 1.440e-24
Identity = 55/120 (45.83%), Postives = 79/120 (65.83%), Query Frame = 0
Query:  565 TIVMFATAENLQNKTKSEILMLLSSVGHTLSQALRKSQLIDKVMELRSRVHNGNLKLTSTAQQTLSPSQHKEANKKKLLDGLYLASLSSWIMKPLVSTPGMKEGNFNESQVLKALPSFFE 684
            T ++ A   +L  KTK++++  +S +GH +S  LRK+Q+++K++  R +V  G L L     + LS  +   A KKKLL+ LY  SL SW+MKPLVST GMKEG FNE QVL+ LP+ F+
Sbjct:    3 TFLVSAETNSLNAKTKAKLVAAMSRIGHPVSSTLRKAQIVEKILVFRQQVQTGELLLVENEVEELSAEEEVIAAKKKLLEVLYKRSLDSWVMKPLVSTVGMKEGLFNEKQVLRELPTLFD 122          
BLAST of Gvermi12442.t1 vs. uniprot
Match: A0A2V3IVJ7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVJ7_9FLOR)

HSP 1 Score: 112 bits (281), Expect = 3.860e-24
Identity = 72/241 (29.88%), Postives = 114/241 (47.30%), Query Frame = 0
Query:  442 SHSFTLIPKAGYESPKSAAEREIFHFISADSVSQTSPSGNRDNNVMDTVARLKVRQVLSNVDEVTLLQSEDPGWFLGRAFQLTSRTSQAFLRAICEDYETNTEALSFLISGKQMDY-------------------------------------KQHEEAVTIVMFATAENLQNKTKSEILMLLSSVGHTLSQALRKSQLIDKVMELRSRVHNGNLKLTSTAQQTLSPSQHKEANKKKLLDG 645
            S  FTL+PKAG +   S A+ E FH +             ++      +AR KV QV+S V EV  LQS+DPGWFL RAFQ TS+T+  F+RA   ++E N  AL+ ++ GK   Y                                      + ++  T ++ A    L   TK+E++  +S +GH +S  LR++Q+++K++  + +V  G + +     + LS  +   A KKK+  G
Sbjct:    4 SSKFTLVPKAGCQHLISNADLEQFHRVYE----------RQEGTYGLYLARYKVGQVVSEVFEVIALQSQDPGWFLARAFQFTSQTTSNFIRARAHNFEINVRALADIVKGKSTGYGNSHFPDTTIESLTRLELRLKNVCEVLNVSLSTAPSENEFDQMKTFLVSAETNALNAMTKAELVAAMSRIGHPVSSTLRRAQIVEKILLFQQQVQTGEVVMVENEAEELSAEEQVIAAKKKITGG 234          
BLAST of Gvermi12442.t1 vs. uniprot
Match: A0A2V3IV24_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV24_9FLOR)

HSP 1 Score: 87.4 bits (215), Expect = 5.740e-17
Identity = 46/111 (41.44%), Postives = 68/111 (61.26%), Query Frame = 0
Query:  183 LSILNVFLPEHVLQKIVSNVNRVLKHKCKRETTPFEITGVLILHVLAASYSSTVGTITAKRNRDFFFQMEIESGSYSEIWAALSCTDERRQRVEQFGD---GWCNYPPRAN 290
            +++ +VF P  +L K+ S VNRVL  + ++ TT  E  G+++ HVLAASY +TV  +T   + +F++Q  I    Y+EIWAAL  T +R QR E +G+   GW N P   N
Sbjct:    1 MNVFDVFFPTSLLGKLRSYVNRVLSARKEKPTTVMEFKGIIVNHVLAASYGTTVSVMTYTESEEFYYQTGILGKRYAEIWAALRGTKKRPQRAEVYGNSEKGWFNKPVVGN 111          
BLAST of Gvermi12442.t1 vs. uniprot
Match: R7Q906_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q906_CHOCR)

HSP 1 Score: 82.0 bits (201), Expect = 2.390e-15
Identity = 36/67 (53.73%), Postives = 50/67 (74.63%), Query Frame = 0
Query:  295 ELEDELAAVNRLFLYVPGVAIFSLDDDHQRLRSRSVAQLTNLSHVNNLQKALGPVNNAICSALNPVF 361
            E+E E AA+NR  LY+P   +FSLDDDH R+   ++  LT+L  +NN +K+LGP++NA+CSALNP F
Sbjct:    2 EIESETAAINRELLYIPNATVFSLDDDHLRMAFSALVVLTHLRQLNNQKKSLGPLDNALCSALNPFF 68          
BLAST of Gvermi12442.t1 vs. uniprot
Match: R7QIE1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIE1_CHOCR)

HSP 1 Score: 85.1 bits (209), Expect = 1.010e-14
Identity = 61/189 (32.28%), Postives = 90/189 (47.62%), Query Frame = 0
Query:  442 SHSFTLIPKAGYESPKSAAEREIFHFI--------SADSVSQTSPSGNRDNNVMDTVARLKVRQVLSNVDEVTLLQSEDPGWFLGRAFQLTSRTSQAFLRAICEDYETNTEALSFLISGKQM---------DYKQHEEAV--------TIVMFATAENLQNKTKSEILMLLSSVGHTLSQALRKSQLID 605
            +H + LIPK G+         E    I          +      P+ +     +   A LKV Q+L ++ + T+LQSEDPGWFLGRAF+ TSRTS  F+ AI  +Y  N   LSFL+ GK++         D K  E+ +        T +  ++ E  Q  T SE  + +S    +L+Q  RK +L+ 
Sbjct:   52 AHHYCLIPKDGFRHKFDCDAEERLQLIFDNRRASAECEEEGYNLPNASVTQRALSNSAVLKVLQLLGHLLQFTILQSEDPGWFLGRAFKFTSRTSNNFIGAIARNYICNIAGLSFLLRGKRLRAGFEPLTSDLKNLEKDLLEKWTSLSTTIGISSREMEQPLTHSEAEIFMSETASSLAQR-RKDELLS 239          
The following BLAST results are available for this feature:
BLAST of Gvermi12442.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
R7QKF5_CHOCR5.550e-12333.17Uncharacterized protein n=2 Tax=Chondrus crispus T... [more]
R7QLD7_CHOCR9.130e-6157.63Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7Q9D7_CHOCR9.440e-4724.67EF-hand domain-containing protein n=1 Tax=Chondrus... [more]
A0A2V3ITK4_9FLOR8.590e-3643.96Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IP41_9FLOR1.440e-2445.83Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IVJ7_9FLOR3.860e-2429.88Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IV24_9FLOR5.740e-1741.44Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q906_CHOCR2.390e-1553.73Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QIE1_CHOCR1.010e-1432.28Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4761234..4764053 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12442.t1Gvermi12442.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4761234..4764053 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12442.t1 ID=Gvermi12442.t1|Name=Gvermi12442.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=768bp
MLSFASEGEQDDYLSVSDSNDESCNQSESVGSESLNADQVSHISEQELRQ
LRVESYLGYAAGGKLVHSNAQDALQIAVEDIWSSLFCDNFDTMMDDSLDV
QNLRDETNILEDAERVMHSRQGGLREWDYGSPFQQFSIDIDGINKILGRR
FIRETNSILDKVTKEIQQEGTEGVLTATSLTRLSILNVFLPEHVLQKIVS
NVNRVLKHKCKRETTPFEITGVLILHVLAASYSSTVGTITAKRNRDFFFQ
MEIESGSYSEIWAALSCTDERRQRVEQFGDGWCNYPPRANSMITELEDEL
AAVNRLFLYVPGVAIFSLDDDHQRLRSRSVAQLTNLSHVNNLQKALGPVN
NAICSALNPVFLASHYSRPGEKITDVWERLIRLIQGVPTAGPVRPMVDAI
FASDRRYNSKATIEYINERIGATGIGMHKRSLDYPFCIRRWSHSFTLIPK
AGYESPKSAAEREIFHFISADSVSQTSPSGNRDNNVMDTVARLKVRQVLS
NVDEVTLLQSEDPGWFLGRAFQLTSRTSQAFLRAICEDYETNTEALSFLI
SGKQMDYKQHEEAVTIVMFATAENLQNKTKSEILMLLSSVGHTLSQALRK
SQLIDKVMELRSRVHNGNLKLTSTAQQTLSPSQHKEANKKKLLDGLYLAS
LSSWIMKPLVSTPGMKEGNFNESQVLKALPSFFECNVVVNGSSLYSENSE
LHDQKYKIEYIRTTGLISSRRDPMISDSPDAVLCFTDCDEAQHVRAVEIK
TMTSLNNVDASEQRKHD*
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