Gvermi12441.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12441.t1
Unique NameGvermi12441.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length178
Homology
BLAST of Gvermi12441.t1 vs. uniprot
Match: A0A2V3II71_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II71_9FLOR)

HSP 1 Score: 121 bits (303), Expect = 2.940e-31
Identity = 67/138 (48.55%), Postives = 85/138 (61.59%), Query Frame = 0
Query:    1 MKSFTLLFLLFAASICLTFGSAVPNDTETA---DECDVPAIVAYCLDMIHLGAEYEPP-SAAVEELKHDVEKAPLGMCPWGDWNGKATVEDCMQILSLYADLDEDNEEV-------EVEMDPSGRFFKKIKRGLKKIG 127
            MK F L        IC    SAVP   E A    ECDVP  VAYCLDM+HLG+ Y    S    EL+HDV++ P+GMC WGDW GK + ++CMQ+L+ Y D D+++++V       E E+  + R FKKIKRGLKKIG
Sbjct:    1 MKRFILYLASVVLCICAASVSAVPQPDEKALIEAECDVPPAVAYCLDMMHLGSNYNSDGSQESAELQHDVDEVPIGMCAWGDWVGKLSADECMQVLAEYEDEDDEDDDVPETGNEAETEVHTT-RIFKKIKRGLKKIG 137          
BLAST of Gvermi12441.t1 vs. uniprot
Match: A0A2V3II08_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II08_9FLOR)

HSP 1 Score: 114 bits (284), Expect = 4.190e-28
Identity = 83/195 (42.56%), Postives = 105/195 (53.85%), Query Frame = 0
Query:    1 MKSFTLLFLLFAASICLTFGSAVPNDTETA---DECDVPAIVAYCLDMIHLGAEYEPP-SAAVEELKHDVEKAPLGMCPWGDWNGKATVEDCMQILSLYADLDEDNEEV-EVEMDP-----SGRFFKKIKRGLKKIGXXXXXXXXXXXXXXXXXXXXXXXF-----------CIKNKEICEKAVEIGVDVINAKH 174
            MK FT   +  A  I     SAVP   E A    ECDVP +VAYCLDMIHLG+ Y    S   EELK DV++ P+GMC WGDW GK + ++CMQ+L+ Y D  +D E+V E E D      + RF K I+  +K+ G            XXXXXXXXXXX            C +N  +C K  + G+ +I  KH
Sbjct:    1 MKPFTFYLISLALCIFSASVSAVPQPDEKALIDAECDVPPVVAYCLDMIHLGSNYNSDGSHDSEELKLDVDEVPIGMCAWGDWVGKLSADECMQVLAEYEDEADDEEDVPETESDAQTEVHTTRFIKNIRDKVKRAGEAIRKGAKGAVKXXXXXXXXXXXXXXXXVRRVSEVCKRNPSMCRKVAQYGIHIIRGKH 195          
BLAST of Gvermi12441.t1 vs. uniprot
Match: F2Z7J1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis andersonii TaxID=408198 RepID=F2Z7J1_9FLOR)

HSP 1 Score: 95.5 bits (236), Expect = 2.140e-21
Identity = 50/147 (34.01%), Postives = 73/147 (49.66%), Query Frame = 0
Query:   31 DECDVPAIVAYCLDMIHLGAEYEPPSAAVE-ELKHDVEKAPLGMCPWGDWNGKATVEDCMQILSLYADLDEDNEEVEVEMDP------SGRFFKKIKRGLKKIGXXXXXXXXXXXXXXXXXXXXXXXFCIKNKEICEKAVEIGVDVI 170
            ++CDVP +VAYCLDM+HLG+     S+    EL+HDVE+ P+GMC WGDW GK + + C+QIL  YA  +E+ + +    +       S RFF+    G                             C K   ICE A ++G+ ++
Sbjct:   34 EQCDVPPVVAYCLDMVHLGSNINKNSSQSNGELQHDVEEIPVGMCAWGDWAGKVSAKQCVQILKEYAAAEEEEKRLRDRQNDTETTKTSSRFFRLFGLGFSSFFKSRRRGGNRSARRVGSTVRRVARSCGKISFICESAADMGIGLL 180          
BLAST of Gvermi12441.t1 vs. uniprot
Match: A0A2V3IBK7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBK7_9FLOR)

HSP 1 Score: 79.7 bits (195), Expect = 6.640e-16
Identity = 43/97 (44.33%), Postives = 59/97 (60.82%), Query Frame = 0
Query:   36 PAIVAYCLDMIHLGAEYEPPSA-AVEELKHDVEKAPLGMCPWGDWNGKATVEDCMQILSLYADLDEDNEEV-EVEMDPS-----GRFFKKIKRGLKK 125
            P +VAYCLD+IHLG   +  S+    EL+  VE+ PLGMC WGDW GK   + C+Q+L  YA  +E+ E + +VE D +      RFF+   RG K+
Sbjct:    3 PPVVAYCLDLIHLGNNLQTNSSRGNRELQQLVEEVPLGMCAWGDWAGKVAADVCVQVLIEYAAAEEEEEGLSDVENDTNTVETTSRFFRWFTRGSKQ 99          
The following BLAST results are available for this feature:
BLAST of Gvermi12441.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3II71_9FLOR2.940e-3148.55Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3II08_9FLOR4.190e-2842.56Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
F2Z7J1_9FLOR2.140e-2134.01Uncharacterized protein n=1 Tax=Gracilariopsis and... [more]
A0A2V3IBK7_9FLOR6.640e-1644.33Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..177
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4758503..4759036 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12441.t1Gvermi12441.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4758503..4759036 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12441.t1 ID=Gvermi12441.t1|Name=Gvermi12441.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=178bp
MKSFTLLFLLFAASICLTFGSAVPNDTETADECDVPAIVAYCLDMIHLGA
EYEPPSAAVEELKHDVEKAPLGMCPWGDWNGKATVEDCMQILSLYADLDE
DNEEVEVEMDPSGRFFKKIKRGLKKIGKKVKKAVKKVARGVKKVVKKVAR
FCIKNKEICEKAVEIGVDVINAKHEQK*
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