Gvermi12439.t2 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12439.t2
Unique NameGvermi12439.t2
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length243
Homology
BLAST of Gvermi12439.t2 vs. uniprot
Match: A0A2V3IHZ6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHZ6_9FLOR)

HSP 1 Score: 302 bits (773), Expect = 7.270e-99
Identity = 145/236 (61.44%), Postives = 172/236 (72.88%), Query Frame = 0
Query:    1 LLRRHAARRLVYTGHVPLAFGLAPALLRALPPGRVRIVRLRRDRIATAVSLMALGPEREDPWGESSPXXXXXXXXXXXXXXXXXXXXALPPPAPTARWFPRPTDAFVRLRVSPAAWRAFNRFQRWLWYVDDVECRWQALLHASAHRFSWMEESLDTLGAMDGGRAWARLADFIGVDVDWRRVATRHNSIQHKQRRKTDASEAQLRQWDEQYRQLVGECALTDSLSYGWRHFALRPL 236
            L+ +H ARRL+YTGHVP+AFGL PAL++ LPPG VRIVR+RR+R+ATA SLMALGPE EDPWG SS                      LP      RWFPRPTDAFVRL+VS   W + NRFQRWLWYVDDVECRWQAL++    RFSWMEESL++L  MDGGR W+R+A+F+GVD+DWR+V  R NSIQ+KQR K   +E QLR+WD QYR+LVG C ++ SLSYGW  FAL  L
Sbjct:  163 LMYKHRARRLLYTGHVPMAFGLGPALVKNLPPGSVRIVRVRRERLATAASLMALGPEEEDPWGSSS-------------NATVANSTTLPDATLNMRWFPRPTDAFVRLQVSTGVWASLNRFQRWLWYVDDVECRWQALVYGLGDRFSWMEESLESLTVMDGGRTWSRIAEFVGVDIDWRKVGVRDNSIQYKQRTKISVAEEQLREWDMQYRKLVGRCKISSSLSYGWSDFALGKL 385          
BLAST of Gvermi12439.t2 vs. uniprot
Match: R7Q8Q7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8Q7_CHOCR)

HSP 1 Score: 269 bits (687), Expect = 6.830e-86
Identity = 130/228 (57.02%), Postives = 158/228 (69.30%), Query Frame = 0
Query:    1 LLRRHAARRLVYTGHVPLAFGLAPALLRALPPGRVRIVRLRRDRIATAVSLMALGPEREDPWGESSPXXXXXXXXXXXXXXXXXXXXALPPPAPTARWFPRPTDAFVRLRVSPAAWRAFNRFQRWLWYVDDVECRWQALLHASAHRFSWMEESLDTLGAMDGGRAWARLADFIGVDVDWRRVATRHNSIQHKQRRKTDASEAQLRQWDEQYRQLVGECALTDSLSYGW 228
            LL+RH+A+RLVYTGH+P+AFGL PAL+R LPPG VR++RLRR+RIATAVSLMALGPE+EDPWG ++                          A   RWFP+P+DA VRL V    W   NRFQRWLWYVDDVECRWQA  H+   RFS MEESL+ L  +DGG++  R+A+F+GV VDW +   R NSI+HK R K +ASE+ LRQWDE YRQ VG C ++   SYGW
Sbjct:  163 LLKRHSAKRLVYTGHLPMAFGLGPALVRTLPPGTVRVLRLRRERIATAVSLMALGPEKEDPWGATTERDSDGQLIYAD--------------AVNRRWFPKPSDAMVRLHVEAHVWAKLNRFQRWLWYVDDVECRWQAFRHSLGSRFSLMEESLENLNMLDGGQSLVRVAEFMGVAVDWSKAGARDNSIEHKMRVKVNASESSLRQWDEAYRQAVGSCRISSKYSYGW 376          
BLAST of Gvermi12439.t2 vs. uniprot
Match: A0A1X6NWE8_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NWE8_PORUM)

HSP 1 Score: 194 bits (493), Expect = 2.040e-56
Identity = 116/218 (53.21%), Postives = 136/218 (62.39%), Query Frame = 0
Query:   11 VYTGHVPLAFGLAPALLRALPPGRVRIVRLRRDRIATAVSLMALGPEREDPWGESSPXXXXXXXXXXXXXXXXXXXXALPPPAPTARWFPRPTDAFVRLRVSPAAWRAFNRFQRWLWYVDDVECRWQALLHASAHRFSWMEESLDTLGAMDGGRAWARLADFIGVDVDWRRVATRHNSIQHKQRRKTDASEAQLRQWDEQYRQLVGECALTDSLSYGW 228
            VYTGHVPLA+GL PAL  AL  GR+R+VRLRR+R+ATAVSLMALGP  ED W   +             XXXXXX    PP     RWFP P+  FV LRV  A W   NRFQR+LWYVDDVECRWQ L    A   + +E  L+ L  +DGGR + RLA F+ V V+    A RHNS+Q K+R K DA E  LRQWD +YR +VG CA+ D     W
Sbjct:  189 VYTGHVPLAYGLGPALADALG-GRLRVVRLRRERLATAVSLMALGPPEEDAW---TADVAVPADAPAAAXXXXXXPAGRPPSTRGLRWFPPPSAPFVALRVGAADWARLNRFQRYLWYVDDVECRWQRLRTRLADGQA-LELQLEALDHLDGGREYGRLARFLRVRVNGTEAAVRHNSMQDKRRDKADAGEGLLRQWDREYRAVVGGCAVGDGRVLSW 401          
BLAST of Gvermi12439.t2 vs. uniprot
Match: A0A7S3EFU3_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EFU3_9RHOD)

HSP 1 Score: 167 bits (423), Expect = 1.430e-46
Identity = 96/220 (43.64%), Postives = 121/220 (55.00%), Query Frame = 0
Query:   13 TGHVPLAFGLAPALLRALPPGRVRIVRLRRDRIATAVSLMALGPEREDPWGESSPXXXXXXXXXXXXXXXXXXXXALPPPAPTARWFPRPTDAFVRLRVSPAAWRAFNRFQRWLWYVDDVECRWQALLHASAHRFSWMEESLDTLGAMDGGRAWARLADFIGVDVDWR--RVATRHNSIQHKQR--RKTDASEAQLRQWDEQYRQLVGECALTDSLSYGW 228
            TGHVPLAFG+AP LL  L       VR+RRDRI  A+SLMALGPE EDPW E S                              RWFPRP+D  V+LR     W  FNRFQR+LW VDD ECRWQ+L    A  F ++E  +++L  ++G   + ++A F+G  +  R   +  R NSI+ K R   K  A E  LR WDEQYR+ VG C +  +L+Y W
Sbjct:  166 TGHVPLAFGMAPVLLELLGSNTFAAVRIRRDRIQQALSLMALGPESEDPWSEDSESL-------------------------NRRWFPRPSDFHVKLRPDEPVWNRFNRFQRYLWLVDDTECRWQSLKRKYA--FDYLEVQMESLLQLNGVEQYEKIAAFVGTGLSARVESMHARDNSIEQKGRDNMKWVADEKTLRLWDEQYRKSVGPCVVDQNLTYKW 358          
BLAST of Gvermi12439.t2 vs. uniprot
Match: A0A5J4YXK0_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YXK0_PORPP)

HSP 1 Score: 143 bits (361), Expect = 1.830e-36
Identity = 103/258 (39.92%), Postives = 130/258 (50.39%), Query Frame = 0
Query:    2 LRRHA--ARRLVYTGHVPLAFGLAPALLRALPPGRVRIVRLRRDRIATAVSLMALGPEREDPWGESSPXXXXXXXXXXXXXXXXXXXXALPPPAPTARWFPRPTDAFVRLRVSPAAWRA-FNRFQRWLWYVDDVECRWQALL--HASA---HRFSWMEESLDTLGAMDGGRAWARLADFIGVDV--------DWRR--VATRHNSIQHKQRRKTD-------------ASEAQLRQWDEQYRQLVGECALTDSLSYGW 228
            +RRH       ++TGHVPLAFG+A +LL  LP G VRIVR+RRDRI  A+SLMALGP  +D W                                  RWF  P  A V LR     WR   NRFQ++LWYVDD ECRWQALL  HA+A    R   +E S++ L  +    A+AR+A F G+ V         W    +A RHNSIQ K+R K               A+E  LR+ D+ YR LVG C ++ + +  W
Sbjct:  235 MRRHGPGVHTHIFTGHVPLAFGMADSLLEVLP-GTVRIVRMRRDRIQLALSLMALGPASQDAWAHIDRKPGNERRQDNGSMRSDETSQL--------RWFASPHHAHVLLRPPLDVWRTQLNRFQKYLWYVDDTECRWQALLRRHAAAIASGRLRVLETSVEELEQISFRTAYARIAHFWGLSVGAEQDGDSSWNPALLAARHNSIQSKKRDKILSLQEVQDTAPAHLANETWLREMDDAYRLLVGACQISPTETLSW 483          
BLAST of Gvermi12439.t2 vs. uniprot
Match: A0A7S3EE82_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EE82_9RHOD)

HSP 1 Score: 122 bits (305), Expect = 6.700e-30
Identity = 65/143 (45.45%), Postives = 78/143 (54.55%), Query Frame = 0
Query:   13 TGHVPLAFGLAPALLRALPPGRVRIVRLRRDRIATAVSLMALGPEREDPWGESSPXXXXXXXXXXXXXXXXXXXXALPPPAPTARWFPRPTDAFVRLRVSPAAWRAFNRFQRWLWYVDDVECRWQALLHASAHRFSWMEESLD 155
            TGHVPLAFG+AP LL  L       VR+RRDRI  A+SLMALGPE EDPW E S                              RWFPRP+D  V+LR     W  FNRFQR+LW +DD E RWQ+L   +A  F ++E  ++
Sbjct:  166 TGHVPLAFGMAPVLLELLGSNTFAAVRIRRDRIQQALSLMALGPESEDPWSEDSESL-------------------------NRRWFPRPSDFHVKLRPDEPVWNRFNRFQRYLWLLDDTESRWQSLKRKNA--FDYLEVEME 281          
BLAST of Gvermi12439.t2 vs. uniprot
Match: A0A7S0T7Q7_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T7Q7_9RHOD)

HSP 1 Score: 96.7 bits (239), Expect = 1.060e-21
Identity = 62/151 (41.06%), Postives = 78/151 (51.66%), Query Frame = 0
Query:   32 PGRVRIVRLRRDRIATAVSLMALGPEREDPWG--ESSPXXXXXXXXXXXXXXXXXXXXALPPPAPTARWFPRPTDAFVRLRVSPA-----AWRAFNRFQRWLWYVDDVECRWQALLHASAHRFS------WMEESLDTLGAMDGGRAWARL 169
            PG +RIVR+RRDRIA A+SLMALGPE +D W   ES+                              RWFP P DA V LR +       AWR  +R Q++LWYVDDVECRW AL+ + A+  +       ME +L+ L  +  G A  RL
Sbjct:    2 PGTLRIVRVRRDRIALALSLMALGPENQDSWTLHESASTTADEEEGKDR----------------NLRWFPTPWDAHVLLRPAEGVSVDEAWRKLHRLQKYLWYVDDVECRWMALVRSVANNATRREKTRLMEINLEELDHISRGLALQRL 136          
The following BLAST results are available for this feature:
BLAST of Gvermi12439.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3IHZ6_9FLOR7.270e-9961.44Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q8Q7_CHOCR6.830e-8657.02Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6NWE8_PORUM2.040e-5653.21Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S3EFU3_9RHOD1.430e-4643.64Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A5J4YXK0_PORPP1.830e-3639.92Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7S3EE82_9RHOD6.700e-3045.45Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A7S0T7Q7_9RHOD1.060e-2141.06Hypothetical protein (Fragment) n=1 Tax=Erythrolob... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 3..215
e-value: 2.0E-5
score: 26.2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..242
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4751038..4751766 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12439.t2Gvermi12439.t2Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4751038..4751766 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12439.t2 ID=Gvermi12439.t2|Name=Gvermi12439.t2|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=243bp
LLRRHAARRLVYTGHVPLAFGLAPALLRALPPGRVRIVRLRRDRIATAVS
LMALGPEREDPWGESSPPPASNASRVAAAAAAAAAAFALPPPAPTARWFP
RPTDAFVRLRVSPAAWRAFNRFQRWLWYVDDVECRWQALLHASAHRFSWM
EESLDTLGAMDGGRAWARLADFIGVDVDWRRVATRHNSIQHKQRRKTDAS
EAQLRQWDEQYRQLVGECALTDSLSYGWRHFALRPLQPRPAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase