Gvermi12434.t2 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12434.t2
Unique NameGvermi12434.t2
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length276
Homology
BLAST of Gvermi12434.t2 vs. uniprot
Match: A0A2V3IIV0_9FLOR (Transforming growth factor-beta-induced protein ig-h3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIV0_9FLOR)

HSP 1 Score: 322 bits (826), Expect = 2.610e-107
Identity = 167/275 (60.73%), Postives = 209/275 (76.00%), Query Frame = 0
Query:    1 MVQKNAPVVSTEPSLASLLSSANRFSTLLRILAASQIPPQSLSGTVFAPVNAAFSTLSPELLRTFMSDVQAARQLILRHVVLDVVPTAKLTANGFLPSAFGGPLPYSSFAGLQLKVDGAPVAAYCDQTFDKGVVHAITTVLRPPGQKWPTFAQTYVPPRARAPSVSQSASARARGATKPATVGGRRAMGLIAQQPAWMYGPPYNAAKQEEYEPISVAVPDVSAVDYQLMPPGSVVVAPDSVNALELNPVSGMSKYIGQTKRIVGKDALSDYSRLD 275
            + Q NAPV S+EP+LA  LS    FSTL  ++A +Q+   ++SGT+FAP NAAF  LS EL++  +     AR+++LRHVV + VP++KLT N FL S  GG LPY+S+ GLQ+K+ G  + A  D +FDKGVVHA+  VL+PP Q WP+F+Q+Y+ P A+ PS    A+ARA GAT  +T+GGR+AMGL+ Q+P WMYGPPY AAKQEEYEPIS+A PDVS VDYQ+MPPGSV+V PDSVNA ELNPVSGMSKYIGQTKR+V  D LSDYSRLD
Sbjct:   45 LAQSNAPVASSEPTLAQALSLP-AFSTLRAVVAVAQLDLSAVSGTLFAPTNAAFKRLSAELVQMVLGSADVAREVLLRHVVSECVPSSKLTGNAFLSSLNGGALPYTSYGGLQIKIGGISLGAQTDISFDKGVVHALDGVLKPPAQTWPSFSQSYIAPVAK-PSPPTIATARAMGATTTSTLGGRKAMGLMTQRPFWMYGPPYCAAKQEEYEPISIAQPDVSFVDYQVMPPGSVIVTPDSVNAAELNPVSGMSKYIGQTKRLVSGDGLSDYSRLD 317          
BLAST of Gvermi12434.t2 vs. uniprot
Match: A0A291FEC1_GRIPA (LR9 n=1 Tax=Griffithsia pacifica TaxID=35689 RepID=A0A291FEC1_GRIPA)

HSP 1 Score: 200 bits (509), Expect = 7.020e-59
Identity = 131/288 (45.49%), Postives = 172/288 (59.72%), Query Frame = 0
Query:    5 NAPVVSTE----PSLASLLSSANRFSTLLRILAASQIPPQSLSGTVFAPVNAAFSTLSPELLRTFMSDVQAARQLILRHVVLDVVPTAK-LTANGFLPSAFGGPLPYSSFAGLQLKVDGAPVA-AYCDQTFDKGVVHAITTVLRPPGQKWPTFAQTYVPPRARAPSVSQSASA----------RARGATK-PATVGGRRAMGLIAQQPAWMYGPPYNAAKQEEYEPISVAVPDVSAVDYQLMPPGSVVVAPDSVNALELNPVSGMSKYIGQTKRIVGKDALSDYSRLD 275
            NAPVV+       ++   L S  R+  L+++ AA  +  +  + TVFAP N A   LS E     ++D  AAR ++LRH++ D V T+K +    F  S  GGPLPY    G  +K+ G  +     D   D G +H I  ++  P  K   FA  + P      S    A+A          RA GA   P+TVGGR+AMGLI Q P WMYGPP+NA+KQE++EPIS+A PDVS+VDYQLMPPGSV+V PD V+A ++ PVSGMSK+IG+TKR+V  D LSDYSRLD
Sbjct:   79 NAPVVTPRMTFGQTVKETLESNPRYGNLVKLAAAGGVDLEVSNCTVFAPTNGA---LSGERYDELLADPVAARNVVLRHILPDQVLTSKAIKGCSFWDSLPGGPLPYEGI-GPVVKIAGVRLLNESSDDECDNGTIHVIDGIISTPLAKPTPFAGVFEPSVPMLESRDDIATAVYPPVTPDVRRAFGAASAPSTVGGRKAMGLIKQLPFWMYGPPFNASKQEDFEPISIANPDVSSVDYQLMPPGSVIVQPDEVSAAKMLPVSGMSKHIGKTKRLVEGDGLSDYSRLD 362          
BLAST of Gvermi12434.t2 vs. uniprot
Match: R7QRM9_CHOCR (FAS1 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRM9_CHOCR)

HSP 1 Score: 193 bits (490), Expect = 4.850e-57
Identity = 114/270 (42.22%), Postives = 162/270 (60.00%), Query Frame = 0
Query:   19 LSSANRFSTLLRILAASQIPPQSLSGTVFAPVNAAFSTLSPELLRTFMSDVQAARQLILRHVVLDVVPTAK-LTANGFLPSAFGGPLPYSSFAGLQLKVDGAPVAAYCDQTFDKGVVHAITTVLRPPGQKWPTFAQTYVPPRARAPSVSQSA-------------SARARGATKPATVGGRRAMGLIAQQPAWMYGPPYNAAKQEEYEPISVAVPDVSAVDYQLMPPGSVVVAPDSVNALELNPVSGMSKYIGQTKRIVGKDALSDYSRL 274
            L  AN++ TL+++  A+ +     + TVFAP +AAF++  P  +   ++    A  +I RH++ D V T+K +   GF     GGPLPY     +    +   +   C+     G++H +  V+  P  K    A+TYVP     P+ + S              ++RA GA  P+T GGR+AMGL+ Q P W YGPP+NAAKQE+YEPIS+A P+ ++VDYQLMPPG+V+V PD V+A +L PVSGMSKYIG+TKR+V + A SDYSRL
Sbjct:   11 LVDANKYKTLIQLAEAAGVDLDVSNCTVFAPNDAAFASTPPGFVTNLLARPAEAAAVIARHILPDRVYTSKQIRGCGFWDGVPGGPLPYEGLGAIVRVGNTRILNDSCNDECVNGIIHTVDAVISTPMHKPEGVAKTYVP---SVPTFTDSTVGSLYPTGTYSRDTSRAVGACLPSTSGGRKAMGLVNQLPFWQYGPPFNAAKQEDYEPISIAQPEGASVDYQLMPPGTVIVTPDEVSADKLLPVSGMSKYIGKTKRLVEEGAQSDYSRL 277          
BLAST of Gvermi12434.t2 vs. uniprot
Match: A0A1X6NYY5_PORUM (FAS1 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NYY5_PORUM)

HSP 1 Score: 189 bits (480), Expect = 7.360e-55
Identity = 125/276 (45.29%), Postives = 163/276 (59.06%), Query Frame = 0
Query:   19 LSSANRFSTLLRILAASQIPPQSLSGT--VFAPVNAAFSTLSPELLRTFMSDVQAA--RQLILRHVVL-DVVPTAKLTANGFLPSAFGGPLPYSSFAGLQLKVDGAPVAA-YCDQTFDKGVVHAITTVLRPPG-QKWPTFAQTYVPPRARAPSVSQS-----------ASARARGATK-PATVGGRRAMGLIAQQPAWMYGPPYNAAKQEEYEPISVAVPDVSAVDYQLMPPGSVVVAPDSVNALELNPVSGMSKYIGQTKRIVGKDALSDYSRLD 275
            L +A  F TL+   AAS    +   G   VFAP +AAF+ L P  L   ++  + A  R ++ RHVV  +V+   K+   G+     GGPLPY +  G+ ++V  A V     +     G++H I +VL PP       FA    P  A + S++++            SARARGA   P+T  GR+AMGLI Q P W YGPPYNAA QE+YEPIS+A PDV+A+DYQ+ PPGSVVV PDSVN+ ELNPVSG SKYIG+TKR V    +S YS+LD
Sbjct:   60 LKAAGVFKTLIAAAAASDAYGEGTKGNFMVFAPSDAAFARLRPGTLEALLAPGKEATLRAIVKRHVVPGNVLTLQKMKGVGYFDGVEGGPLPYEALGGV-IRVGNALVQQDRSNVECSNGIIHVIDSVLVPPSVTPAGVFAGFIAPKPALSDSIAETYYNQPSATMQLGSARARGAASAPSTSSGRKAMGLIKQLPFWAYGPPYNAAYQEDYEPISIAAPDVAAIDYQVFPPGSVVVVPDSVNSGELNPVSGYSKYIGKTKRNVEGAGISQYSKLD 334          
BLAST of Gvermi12434.t2 vs. uniprot
Match: A0A7S0ZBR4_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZBR4_9RHOD)

HSP 1 Score: 174 bits (441), Expect = 3.280e-49
Identity = 110/271 (40.59%), Postives = 156/271 (57.56%), Query Frame = 0
Query:    9 VSTE-PSLASLLSSANRFSTLLRILAASQIPPQSLSGTVFAPVNAAFSTLSPELLRTFMSDVQAARQLILRHVVLDV-VPTAKLTANGFLPSAFGGPLPYSSFAGLQL--KVDGAPVAAYCDQTFDKGVVHAITTVLRPPGQKWPTFAQT---YVPPRARAPSVSQSASARARGATKPATVGGRRAMGLIAQQPAWMYGPPYNAAKQEEYEPISVAVPDVSAVDYQLMPPGSVVVAPDSVNALELNPVSGMSKYIGQTKRIVGKDALSDYS 272
            +STE PS  S+L S   F+T+L ++  +++PP +   T+  P +AAF+ L P  L    SD     + +    + +V    + L  +G+L  A+G  +PYSS  G+    K     +    +     G +H + +VL P   K P  A     ++P    +   S + + R  GA+K  T+ GR+AM LI Q+P WMYGPPYNAAKQEEYEPIS+A    + VDYQ +P G+V   PDSVN+LELNPVSGMSKYIG TK++ G  A+S Y+
Sbjct:   44 MSTELPSTFSVLKSKGSFNTVLALVQKAKLPPLTSKYTLLFPSDAAFARLQPGTLEWIQSDPSRLSEFLKYMAIPNVSFKLSDLKGDGYLQPAYGESMPYSSLVGVTKFGKSKARAIPESSNIQTQSGYIHTLDSVLFPAHFKLPQLAAASSGFLPSLNVSVKRSTAETKRYVGASKNVTISGRKAMNLIEQKPFWMYGPPYNAAKQEEYEPISIAE-SKAFVDYQKLPQGTVKFVPDSVNSLELNPVSGMSKYIGNTKKLTGDGAISSYA 313          
BLAST of Gvermi12434.t2 vs. uniprot
Match: A0A5J4Z027_PORPP (FAS1 domain-containing protein n=2 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z027_PORPP)

HSP 1 Score: 156 bits (395), Expect = 3.240e-42
Identity = 100/233 (42.92%), Postives = 129/233 (55.36%), Query Frame = 0
Query:   46 VFAPVNAAFSTLSPELLRTFMSDVQAARQLILRHVVLDV--VPTAKLTANGFLPSAFGGPLPYSSFAGLQLKVDGAPVAAYCDQTFDKGV---VHAITTVLRPPGQKWPTFAQTYVPPRARAPSVSQS-ASARARGATKPATVGGRRAMGLIAQQPAWMYGPPYNAAKQEEYEPISVAVPDVSAVDYQLMPPGSVVVAPDSVNALELNPVSGMSKYIGQTKRIVGKDALSDYS 272
            VF P + AF+ LSP+L +  M D +    ++  H+           L   G+L  A+G  + Y    G  +K+  A V         K +    H + T + P         +    P   A  VS + A  R  GATKPA VGGRRAM L+ QQP WMYGPPYNA  Q+EYEPIS A P  + VDYQ+  PG+V V+PDSVNA ELNPVSGMSKYIG+T+++VG   +SD S
Sbjct:   98 VFIPNDGAFARLSPQLRKAMMEDSRLVYDMLAGHIFTSKGSAMLKDLQGAGYLQPAYGEAIGYVG-TGRVIKIGNAQVIPESSDILRKNLGFSAHTLDTFIVPKALTKKVSIEAGFSPVTPAKYVSTTKADLRYVGATKPAAVGGRRAMNLMKQQPFWMYGPPYNAVTQDEYEPISAAAPK-AFVDYQIFAPGTVKVSPDSVNANELNPVSGMSKYIGKTQKLVGDQGISDRS 328          
BLAST of Gvermi12434.t2 vs. uniprot
Match: UPI001C0C87CD (fasciclin domain-containing protein n=1 Tax=Deinococcus aestuarii TaxID=2774531 RepID=UPI001C0C87CD)

HSP 1 Score: 62.0 bits (149), Expect = 3.240e-7
Identity = 52/141 (36.88%), Postives = 73/141 (51.77%), Query Frame = 0
Query:   14 SLASLLSSANRFSTLLRILAASQIPPQSLSG---TVFAPVNAAFSTLSPELLRTFMSDVQAARQLILRHVVLDVVPTAKLTANGFLPSAFGGPLPYS---SFAGLQLKVDGAPVAAYCDQ----TFDKGVVHAITTVLRPP 144
            SLA+L++S +RFSTL R++ A+ +  ++LSG   T+FAP N AF  L+P  L    +D    RQ++L HVV   V    L +   L SA  G L  S   +   L+ +V  A            T   GV++ I TVL PP
Sbjct:  556 SLATLIASDDRFSTLARLVQAAGLT-ETLSGGDFTIFAPTNDAFLKLAPSDLNALAADPARLRQVLLYHVVPTRVTGTALASATQLTSAQSGVLTVSREGTGGELRTRVGNATTTGLVQPGDVLTTGNGVLYVIDTVLLPP 695          
BLAST of Gvermi12434.t2 vs. uniprot
Match: UPI0011AF0B0D (fasciclin domain-containing protein n=1 Tax=Deinococcus planocerae TaxID=1737569 RepID=UPI0011AF0B0D)

HSP 1 Score: 58.2 bits (139), Expect = 5.230e-6
Identity = 50/153 (32.68%), Postives = 77/153 (50.33%), Query Frame = 0
Query:    5 NAPVVSTE---PSLASLLSSANRFSTLLRILAASQIPPQSLSG--TVFAPVNAAFSTLSPELLRTFMSDVQAARQLILRHVVLDVVPTAKLTANGFLPSAFGGPLPYS---SFAGLQ-LKVDGAPVAAYCDQ----TFDKGVVHAITTVLRPP 144
            N+ V +T     SLA+L++S +RF+TL R++ A+ +     SG  T+FAP N AF  L+P  L    +D    R+++L HVV   V    L +   L +A  G L  S   +  G Q  ++  A  + +       T   GV++ + TVL PP
Sbjct:  101 NSSVATTSRNNTSLAALIASDDRFTTLARLVQAAGLTETLSSGDFTIFAPTNDAFLKLAPSDLNALAADPARLREVLLYHVVPTRVTGTALASANQLTTAQSGVLTISREGAATGEQRTRIGNATTSGFTQPGNNITTGNGVLYVLDTVLLPP 253          
The following BLAST results are available for this feature:
BLAST of Gvermi12434.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A2V3IIV0_9FLOR2.610e-10760.73Transforming growth factor-beta-induced protein ig... [more]
A0A291FEC1_GRIPA7.020e-5945.49LR9 n=1 Tax=Griffithsia pacifica TaxID=35689 RepID... [more]
R7QRM9_CHOCR4.850e-5742.22FAS1 domain-containing protein n=1 Tax=Chondrus cr... [more]
A0A1X6NYY5_PORUM7.360e-5545.29FAS1 domain-containing protein n=1 Tax=Porphyra um... [more]
A0A7S0ZBR4_9RHOD3.280e-4940.59Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A5J4Z027_PORPP3.240e-4242.92FAS1 domain-containing protein n=2 Tax=Porphyridiu... [more]
UPI001C0C87CD3.240e-736.88fasciclin domain-containing protein n=1 Tax=Deinoc... [more]
UPI0011AF0B0D5.230e-632.68fasciclin domain-containing protein n=1 Tax=Deinoc... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000782FAS1 domainSMARTSM00554fasc_3coord: 45..144
e-value: 1.7E-13
score: 60.9
IPR000782FAS1 domainPFAMPF02469Fasciclincoord: 24..143
e-value: 2.0E-13
score: 50.7
IPR000782FAS1 domainPROSITEPS50213FAS1coord: 12..141
score: 16.878117
IPR036378FAS1 domain superfamilyGENE3D2.30.180.10FAS1 domaincoord: 2..144
e-value: 3.3E-19
score: 71.6
IPR036378FAS1 domain superfamilySUPERFAMILY82153FAS1 domaincoord: 11..144
NoneNo IPR availablePANTHERPTHR10900PERIOSTIN-RELATEDcoord: 12..148
NoneNo IPR availablePANTHERPTHR10900:SF109RE16941Pcoord: 12..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4735314..4736141 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12434.t2Gvermi12434.t2Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4735314..4736141 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12434.t2 ID=Gvermi12434.t2|Name=Gvermi12434.t2|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=276bp
MVQKNAPVVSTEPSLASLLSSANRFSTLLRILAASQIPPQSLSGTVFAPV
NAAFSTLSPELLRTFMSDVQAARQLILRHVVLDVVPTAKLTANGFLPSAF
GGPLPYSSFAGLQLKVDGAPVAAYCDQTFDKGVVHAITTVLRPPGQKWPT
FAQTYVPPRARAPSVSQSASARARGATKPATVGGRRAMGLIAQQPAWMYG
PPYNAAKQEEYEPISVAVPDVSAVDYQLMPPGSVVVAPDSVNALELNPVS
GMSKYIGQTKRIVGKDALSDYSRLD*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000782FAS1_domain
IPR036378FAS1_dom_sf