Gvermi12405.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12405.t1
Unique NameGvermi12405.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length113
Homology
BLAST of Gvermi12405.t1 vs. uniprot
Match: A0A2V3J408_9FLOR (Dynein light chain n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J408_9FLOR)

HSP 1 Score: 192 bits (489), Expect = 1.030e-61
Identity = 97/117 (82.91%), Postives = 101/117 (86.32%), Query Frame = 0
Query:    1 MKYASEAPSAVRS-----HAGDHKFVPVDKQPRVVVKSADMPDDMQRKAIELALTALDRFELERDMAKFLKKEFDTRYQPSWHCIVGRHFGSYVTHETSGFLYFYIEKTAVLLFRSG 112
            M  A EA   VRS     H  +HKFVPV  QPRVV+KSADMP+DM RKAIELALTALDRFELERDMAKFLKKEFDTRYQPSWHCIVGRHFGSYVTHE+SGFLYFYIEKTAVLLFRSG
Sbjct:    1 MTLAPEAAGTVRSQSKEEHFAEHKFVPVKNQPRVVIKSADMPEDMIRKAIELALTALDRFELERDMAKFLKKEFDTRYQPSWHCIVGRHFGSYVTHESSGFLYFYIEKTAVLLFRSG 117          
BLAST of Gvermi12405.t1 vs. uniprot
Match: R7QH34_CHOCR (Dynein light chain n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QH34_CHOCR)

HSP 1 Score: 169 bits (429), Expect = 1.590e-52
Identity = 79/94 (84.04%), Postives = 87/94 (92.55%), Query Frame = 0
Query:   19 KFVPVDKQPRVVVKSADMPDDMQRKAIELALTALDRFELERDMAKFLKKEFDTRYQPSWHCIVGRHFGSYVTHETSGFLYFYIEKTAVLLFRSG 112
            + +P  +QPRVVVKSADMPDDMQRKAIELAL ALDRFELERDMA++LKKEFD R+QPSWHCIVGRHFGSYVTHE +GFLYFYIEK A+LLFRSG
Sbjct:   27 RHIPASRQPRVVVKSADMPDDMQRKAIELALVALDRFELERDMAQYLKKEFDARFQPSWHCIVGRHFGSYVTHEGAGFLYFYIEKIAILLFRSG 120          
BLAST of Gvermi12405.t1 vs. uniprot
Match: Q4FKD8_TRYB2 (Dynein light chain n=12 Tax=Trypanosomatidae TaxID=5654 RepID=Q4FKD8_TRYB2)

HSP 1 Score: 127 bits (318), Expect = 5.190e-36
Identity = 53/85 (62.35%), Postives = 73/85 (85.88%), Query Frame = 0
Query:   28 RVVVKSADMPDDMQRKAIELALTALDRFELERDMAKFLKKEFDTRYQPSWHCIVGRHFGSYVTHETSGFLYFYIEKTAVLLFRSG 112
            + ++K+ADMP+DMQ  A+E+AL AL++F +E+D+A ++KKEFD +YQP+WHCIVGR+FGSYVTHET  FLYFY  + A+LLF+SG
Sbjct:    6 KAIIKNADMPEDMQSDAVEVALQALEKFNIEKDIAAYIKKEFDKKYQPTWHCIVGRNFGSYVTHETHSFLYFYFGQVAILLFKSG 90          
BLAST of Gvermi12405.t1 vs. uniprot
Match: A0A7C9DZ94_OPUST (Dynein light chain n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9DZ94_OPUST)

HSP 1 Score: 125 bits (313), Expect = 6.480e-35
Identity = 57/111 (51.35%), Postives = 82/111 (73.87%), Query Frame = 0
Query:    2 KYASEAPSAVRSHAGDHKFVPVDKQPRVVVKSADMPDDMQRKAIELALTALDRFELERDMAKFLKKEFDTRYQPSWHCIVGRHFGSYVTHETSGFLYFYIEKTAVLLFRSG 112
            K  S    A +  + D K  P     RVV+KSADM DDMQ++A+++A+ A ++  +E+D+A+ +KKEFD +Y  +WHCIVGR+FGSYVTHET+ F+YFY+++ AVLLF+SG
Sbjct:    6 KRGSLGAFAGKPSSDDRKSSPASSGKRVVIKSADMSDDMQKEAVDIAIAAFEKHSVEKDVAERIKKEFDKKYGATWHCIVGRNFGSYVTHETNHFIYFYLDQKAVLLFKSG 116          
BLAST of Gvermi12405.t1 vs. uniprot
Match: A0A1S3TZG9_VIGRR (Dynein light chain n=6 Tax=Phaseoleae TaxID=163735 RepID=A0A1S3TZG9_VIGRR)

HSP 1 Score: 125 bits (313), Expect = 6.880e-35
Identity = 56/107 (52.34%), Postives = 84/107 (78.50%), Query Frame = 0
Query:    8 PSAVRSHAGDHKFVPVDKQP--RVVVKSADMPDDMQRKAIELALTALDRFELERDMAKFLKKEFDTRYQPSWHCIVGRHFGSYVTHETSGFLYFYIEKTAVLLFRSG 112
            P   R +A D K +P    P  +V++KSADM  DMQ++A+++A+ A +++ +E+D+A+ +KKEFD R+ P+WHCIVGR+FGSYVTHET+ F+YFY+++ AVLLF+SG
Sbjct:   12 PPTARLNADDRKPLPAPAVPPKKVIIKSADMIPDMQKEAVDIAVAAFEKYNVEKDVAEQIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 118          
BLAST of Gvermi12405.t1 vs. uniprot
Match: A0A8C4N859_EPTBU (Dynein light chain n=1 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4N859_EPTBU)

HSP 1 Score: 123 bits (308), Expect = 1.680e-34
Identity = 51/87 (58.62%), Postives = 71/87 (81.61%), Query Frame = 0
Query:   26 QPRVVVKSADMPDDMQRKAIELALTALDRFELERDMAKFLKKEFDTRYQPSWHCIVGRHFGSYVTHETSGFLYFYIEKTAVLLFRSG 112
            + + V+K+ADMPDDMQ  A+  A  ALD+F +E+D+A F+KKEFD +Y P+WHC+VGR+FGSYVTHE+  F+YFY+ + A+LLF+SG
Sbjct:    3 EQKPVIKNADMPDDMQEDAVSFAKQALDKFNIEKDIASFIKKEFDKKYNPTWHCVVGRNFGSYVTHESKHFIYFYLGQVAILLFKSG 89          
BLAST of Gvermi12405.t1 vs. uniprot
Match: A0A183SHA5_SCHSO (Dynein light chain n=2 Tax=Diphyllobothriidae TaxID=28843 RepID=A0A183SHA5_SCHSO)

HSP 1 Score: 122 bits (307), Expect = 2.450e-34
Identity = 52/85 (61.18%), Postives = 71/85 (83.53%), Query Frame = 0
Query:   28 RVVVKSADMPDDMQRKAIELALTALDRFELERDMAKFLKKEFDTRYQPSWHCIVGRHFGSYVTHETSGFLYFYIEKTAVLLFRSG 112
            + VVK+ADM D+MQ+ A+E A  AL++F++E+D+A +LKKEFD +Y P+WHC+VGRHFGSYVTHET  F+YFY+   A+LLF+SG
Sbjct:    6 KAVVKNADMDDEMQQTAVECAAVALEKFQIEKDIASYLKKEFDKKYGPTWHCVVGRHFGSYVTHETRHFIYFYVGSLALLLFKSG 90          
BLAST of Gvermi12405.t1 vs. uniprot
Match: UPI0005400238 (dynein light chain 1, cytoplasmic n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI0005400238)

HSP 1 Score: 123 bits (308), Expect = 3.310e-34
Identity = 52/85 (61.18%), Postives = 75/85 (88.24%), Query Frame = 0
Query:   28 RVVVKSADMPDDMQRKAIELALTALDRFELERDMAKFLKKEFDTRYQPSWHCIVGRHFGSYVTHETSGFLYFYIEKTAVLLFRSG 112
            R++VKSADM DDMQ++AIE+A+ A ++  +E+D+A+ +KKEFD ++ P+WHCIVGR+FGSYVTHET+ F+YFY+++ AVLLF+SG
Sbjct:   28 RIIVKSADMADDMQKEAIEIAIAAFEKLNVEKDVAESIKKEFDKKHGPTWHCIVGRNFGSYVTHETNHFIYFYLDQKAVLLFKSG 112          
BLAST of Gvermi12405.t1 vs. uniprot
Match: DYL1_HELCR (Dynein light chain LC6, flagellar outer arm n=6 Tax=Eleutherozoa TaxID=133551 RepID=DYL1_HELCR)

HSP 1 Score: 122 bits (306), Expect = 3.380e-34
Identity = 51/85 (60.00%), Postives = 72/85 (84.71%), Query Frame = 0
Query:   28 RVVVKSADMPDDMQRKAIELALTALDRFELERDMAKFLKKEFDTRYQPSWHCIVGRHFGSYVTHETSGFLYFYIEKTAVLLFRSG 112
            + V+K+ADMP+DMQ+ A++ A  AL++F +E+D+A ++KKEFD +Y P+WHCIVGR+FGSYVTHET  F+YFY+ + AVLLF+SG
Sbjct:    5 KAVIKNADMPEDMQQDAVDCATQALEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAVLLFKSG 89          
BLAST of Gvermi12405.t1 vs. uniprot
Match: T2M856_HYDVU (Dynein light chain n=5 Tax=Eukaryota TaxID=2759 RepID=T2M856_HYDVU)

HSP 1 Score: 122 bits (306), Expect = 3.380e-34
Identity = 53/85 (62.35%), Postives = 71/85 (83.53%), Query Frame = 0
Query:   28 RVVVKSADMPDDMQRKAIELALTALDRFELERDMAKFLKKEFDTRYQPSWHCIVGRHFGSYVTHETSGFLYFYIEKTAVLLFRSG 112
            + VVK+ADM +DMQ+ AIE A  A+++F +E+D+A F+KKEFD +Y P+WHCIVGR+FGSYVTHET  F+YFYI + A+LLF+SG
Sbjct:    5 KAVVKNADMSEDMQQDAIECATNAMEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYIGQVAILLFKSG 89          
The following BLAST results are available for this feature:
BLAST of Gvermi12405.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J408_9FLOR1.030e-6182.91Dynein light chain n=1 Tax=Gracilariopsis chorda T... [more]
R7QH34_CHOCR1.590e-5284.04Dynein light chain n=1 Tax=Chondrus crispus TaxID=... [more]
Q4FKD8_TRYB25.190e-3662.35Dynein light chain n=12 Tax=Trypanosomatidae TaxID... [more]
A0A7C9DZ94_OPUST6.480e-3551.35Dynein light chain n=1 Tax=Opuntia streptacantha T... [more]
A0A1S3TZG9_VIGRR6.880e-3552.34Dynein light chain n=6 Tax=Phaseoleae TaxID=163735... [more]
A0A8C4N859_EPTBU1.680e-3458.62Dynein light chain n=1 Tax=Eptatretus burgeri TaxI... [more]
A0A183SHA5_SCHSO2.450e-3461.18Dynein light chain n=2 Tax=Diphyllobothriidae TaxI... [more]
UPI00054002383.310e-3461.18dynein light chain 1, cytoplasmic n=1 Tax=Beta vul... [more]
DYL1_HELCR3.380e-3460.00Dynein light chain LC6, flagellar outer arm n=6 Ta... [more]
T2M856_HYDVU3.380e-3462.35Dynein light chain n=5 Tax=Eukaryota TaxID=2759 Re... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001372Dynein light chain, type 1/2SMARTSM01375Dynein_light_2coord: 24..111
e-value: 2.8E-49
score: 179.7
IPR001372Dynein light chain, type 1/2PFAMPF01221Dynein_lightcoord: 29..111
e-value: 1.3E-35
score: 121.7
IPR001372Dynein light chain, type 1/2PANTHERPTHR11886DYNEIN LIGHT CHAINcoord: 23..112
IPR037177Dynein light chain superfamilyGENE3D3.30.740.10Protein Inhibitor Of Neuronal Nitric Oxide Synthase;coord: 20..111
e-value: 9.2E-38
score: 130.1
IPR037177Dynein light chain superfamilySUPERFAMILY54648DLCcoord: 28..112
NoneNo IPR availablePANTHERPTHR11886:SF62DYNEIN LIGHT CHAINcoord: 23..112
IPR019763Dynein light chain, type 1/2, conserved sitePROSITEPS01239DYNEIN_LIGHT_1coord: 78..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4581922..4582260 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12405.t1Gvermi12405.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4581922..4582260 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12405.t1 ID=Gvermi12405.t1|Name=Gvermi12405.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=113bp
MKYASEAPSAVRSHAGDHKFVPVDKQPRVVVKSADMPDDMQRKAIELALT
ALDRFELERDMAKFLKKEFDTRYQPSWHCIVGRHFGSYVTHETSGFLYFY
IEKTAVLLFRSG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001372Dynein_light_chain_typ-1/2
IPR037177DLC_sf
IPR019763Dynein_light_1/2_CS