Gvermi12397.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12397.t1
Unique NameGvermi12397.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length230
Homology
[Close]
BLAST of Gvermi12397.t1 vs. uniprot
Match: A0A2V3J521_9FLOR (B-box zinc finger protein 19 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J521_9FLOR)

HSP 1 Score: 121 bits (304), Expect = 3.280e-28
Identity = 88/229 (38.43%), Postives = 125/229 (54.59%), Query Frame = 0 
Query:    1 MPSEIAEAAKSLCEPLLITEDSDIQPLETDPLADSDSCSLDLSSVIPTTSLDPASDNTMPHVNLRPPPPSPYTSTLPGSVXXXXXXXXXXXXXXSGDPSMWRNHTGSQSSKTATVAAAATAAAEMFLLKSVPDAAAPKEKQNHASLMDACPEIDPRGVAAAXXXXXXXXXXXVNMNL-----GTLSPRPPFPELSLKGRLPRHVSEPALPLRAAAQQHVFDEAMRRLDI 224
            +P+EIA+AAKSLC+PL+I+ +  +QPL  DPLA+ D  S+DLS V+   SLDP  ++ +    L+PP  +P  +  P  +              +  PS+              +AAAATAAAE +LL++   A++  E+ ++ ++ +    +DP GVA A           V++         +S R  F       RLPRH SEP LPLRAAAQ+HVFDEAMRRLDI
Sbjct:  291 LPTEIADAAKSLCDPLIISGEPPMQPLGRDPLAEPDPNSIDLSKVVTCPSLDPDPEDCVLEEQLKPPTTTPLPTKAPSKLLKTEPHSSVDYIHGTPQPSI------------TVMAAAATAAAERYLLETTSPASSSCERLSNPAI-ECGRGLDPGGVAEAATAAAESAAAAVDIGSVPARRSIVSGRHHF------ARLPRHASEPILPLRAAAQKHVFDEAMRRLDI 500
The following BLAST results are available for this feature:
BLAST of Gvermi12397.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J521_9FLOR3.280e-2838.43B-box zinc finger protein 19 n=1 Tax=Gracilariopsi... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 76..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4556438..4557127 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12397.t1Gvermi12397.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4556438..4557127 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12397.t1 ID=Gvermi12397.t1|Name=Gvermi12397.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=230bp
MPSEIAEAAKSLCEPLLITEDSDIQPLETDPLADSDSCSLDLSSVIPTTS
LDPASDNTMPHVNLRPPPPSPYTSTLPGSVPHDSTQPTSLPLDTSGDPSM
WRNHTGSQSSKTATVAAAATAAAEMFLLKSVPDAAAPKEKQNHASLMDAC
PEIDPRGVAAAATAAAASAAAAVNMNLGTLSPRPPFPELSLKGRLPRHVS
EPALPLRAAAQQHVFDEAMRRLDIDLVKH*
back to top