Gvermi12395.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12395.t1
Unique NameGvermi12395.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length391
Homology
The following BLAST results are available for this feature:
BLAST of Gvermi12395.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019448NT-type C2 domainPFAMPF10358NT-C2coord: 11..148
e-value: 1.3E-8
score: 34.7
IPR019448NT-type C2 domainPROSITEPS51840C2_NTcoord: 1..143
score: 17.711269
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 194..213
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 219..248
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 154..248
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 159..192
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..390
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
IPR039931Protein FAM102-likePANTHERPTHR21456FAMILY WITH SEQUENCE SIMILARITY 102coord: 11..256

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4493884..4495056 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12395.t1Gvermi12395.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4493884..4495056 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12395.t1 ID=Gvermi12395.t1|Name=Gvermi12395.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=391bp
MRFRGGPPRVFAVALTIHQLDSIPLIHQLLYVQWRARRASPQEGRTPSLP
VEPGNVIRWDCHTHFSLPIYSDSADHTLLQPAPLLLQLRSERRPRWVGAA
SSFEGTVTVDLAEVAAVGFLSRNYLVQGSLLNTTLKLSIRVTHKSGDKIF
RTRTLPHISTALGRPSTPSTPTQATPSTSGTESAQPISLLEDDDPTSSLE
RSTEFDNPAKERQPSSHRLGATLAATKQPSNGSFTSSHSIAAPGPASFRN
TDPASSALFELVQTPSAVLESSIPNPDILQKDVYETMFQQRMRDRWPDHI
VQSRVEALSAVNSIYDAISQEDGIGLATVSDARNESDVNKFDQTLCLDHL
IESRANPNVGLPPLLATRRTSNRSLSVRSSSTSELKELAN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019448NT-C2
IPR039931FAM102-like