Gvermi12394.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12394.t1
Unique NameGvermi12394.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length304
Homology
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BLAST of Gvermi12394.t1 vs. uniprot
Match: A0A2V3J414_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J414_9FLOR)

HSP 1 Score: 403 bits (1036), Expect = 6.100e-139
Identity = 212/308 (68.83%), Postives = 248/308 (80.52%), Query Frame = 0 
Query:    1 MSSSPAWLSVALSTLASVKEEPAEVLRTGIRKLPQSHILHHLNRWARHVWRPAISPEQLQALTNDPQPASVARLNAGAASLLAALFEAVRRCKAEPWVKIIGVMFLADDPWAIDVGYEKQVQVERCVHAIDALFANSESVESIATALNSETVELPVDGVLAATPDESFAELRCRVAALQLQLDDVTAVVRRNEQNTKDLLSSFHFWSLLLLDELRSYKQAARSPATTPGHSQTAGEMTAGLPPMRALSSPWRKEANPSEYRRGRSSASHG--------NISTSPPSVSLRATQPEPTRPKRVFRDGKW 300
            M+SSPAWL+VALSTLA+V+EEPA+VL  GIRKLPQ HILHHLNRWARHVWRPAI+PEQLQALTN P+PASV RLNAGAASLL AL EAVRRC AE W++++GVMFLA DPWAIDVG+E+Q QV +C HAI+ LF NS+ V     ALN+ET+ELPVDGV AA+ DESFAELRCRVAALQLQLDDVTAVVR+NE+NTKDLLSSFHFWSLLLLDELRSYK A RSP +TP  SQ A +M AGLPPMR L + ++++    +     S+A++G        +I+TSP     RA + E  +PKRVFRDGKW
Sbjct:    1 MTSSPAWLTVALSTLATVEEEPAQVLHHGIRKLPQFHILHHLNRWARHVWRPAITPEQLQALTNRPEPASVQRLNAGAASLLGALLEAVRRCDAERWLQVLGVMFLAADPWAIDVGHEEQAQVNKCAHAIELLFENSQQVAITVAALNTETIELPVDGVFAASKDESFAELRCRVAALQLQLDDVTAVVRQNEKNTKDLLSSFHFWSLLLLDELRSYKHAVRSPVSTPTQSQAA-DMGAGLPPMRPLPAGYKRDGASGDVYAAFSAATNGAWSAKGNASIATSP-----RAPKGE-LKPKRVFRDGKW 301
The following BLAST results are available for this feature:
BLAST of Gvermi12394.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J414_9FLOR6.100e-13968.83Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 261..285
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 221..299
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..303
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4492689..4493600 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12394.t1Gvermi12394.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4492689..4493600 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12394.t1 ID=Gvermi12394.t1|Name=Gvermi12394.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=304bp
MSSSPAWLSVALSTLASVKEEPAEVLRTGIRKLPQSHILHHLNRWARHVW
RPAISPEQLQALTNDPQPASVARLNAGAASLLAALFEAVRRCKAEPWVKI
IGVMFLADDPWAIDVGYEKQVQVERCVHAIDALFANSESVESIATALNSE
TVELPVDGVLAATPDESFAELRCRVAALQLQLDDVTAVVRRNEQNTKDLL
SSFHFWSLLLLDELRSYKQAARSPATTPGHSQTAGEMTAGLPPMRALSSP
WRKEANPSEYRRGRSSASHGNISTSPPSVSLRATQPEPTRPKRVFRDGKW
TTL*
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