Gvermi12373.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12373.t1
Unique NameGvermi12373.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length650
Homology
BLAST of Gvermi12373.t1 vs. uniprot
Match: A0A2V3IK38_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK38_9FLOR)

HSP 1 Score: 494 bits (1273), Expect = 7.120e-164
Identity = 335/696 (48.13%), Postives = 426/696 (61.21%), Query Frame = 0
Query:   14 FVLTSLVITLFTHPVFSRETSDNSLSGASAPQSFVL-----------------RRTLQQIQPNGDDSLDGD--LKGSQRLAEAALQRQGIEEAQTAPENEQKEKGVTKKPDEDDLNDVDAQIQEIAKRVGITEEELKQANILQS----------DTNNAAEVDGRLDHHDM----------AEKQQSKNDAGREDI--------------------LDARDKVDQLPPPPEEDVRQPAQAPPEMVAPGQPLLRKVQKPGSIGKPQKPQDDKKGSPDSSIQSEASELTAQLETYKKRLNSLLQSEQEARENERAARIEADELQKKMKSMKKEKKNAEQLVSERNADLAKLRDSLPQIVKEAKDEERGEIEEMKETIEEQKRAFDELFEEKQMLSKMLADEQRKLDELQEKIQHPDLGQWVRQRAERAAILVEGPETDAIKYYASQYMAPKVTKMKHRLQMLENRVEQTVDHLLPAKYGSVVAMLLSIGLVGFPIFVTLSTVVSLTKGVSLRQYVLLGNVFLTAFAVGLGGVGLLLRQDPLQTLYEANGGMFIVLQLCIGVGYPLFLGVLMLTVMRCKDRLDMLVFGCELLFYVVIGMNYRARVWRPAMLGENIDCGTMMYVVYTMDFFAMTALTVASSRSTGVGALGGGVVDIEKG-RGVEVGDGSGRADAGSKGIGTLGSNLIQMAVGSKRVEKAE 649
            F++  L + L  HPV    + D+ L  A+ P   +                  RR L+Q Q +  D LD D   KG+  L E A   QG+E A   P+   ++ G      +DD  +VDAQI  IA+  GITEEEL + ++ Q           D N A+        HD           AE+  +++DA ++D                     + A+D+ D       +D RQ  QAPPEMVAPG+P    V +             K  + ++S   + S L  + E Y++R+ SL + EQ AR NER A+               EK +A+  VSE+  +  KLR+S  + V EAK E++ E+EEMK  I        ELFEEKQ+LS+ML+DEQRKL+ELQEKIQHPDLG WVRQRAERAAILVEGPETDA+KYYA +YMAPKVTKMKHRLQMLENRVE++VDHLLPAKYG  VAMLLSIGL+GFP+FVTLST VSLTK  SLRQ+VL+GNVF TAFAVGL   GL+LRQDPLQTLYEA+  +FI+LQL + V YP FL V+   V+R +D++D+LVFGCEL+FY VIGMNYR+RVWR AMLGE+ID G MMY VY +DF AM ALTV+SSR+ G   +GG   D+E G   + V  G+GR  A ++GI +LGS L+Q+AVG KR +K E
Sbjct:   10 FLVLFLFLFLCPHPVLCSVSRDDDLGPATPPTHHIAIHEQTSINAFPHVARLYRRRLKQEQADDTDDLDKDQDTKGTDTLTEGAFSAQGVEHADGIPKPN-RDDGDAAAEAKDDA-EVDAQIAAIARHAGITEEELNRVDVNQDTGRKLEDMVKDVNEASASSIYARDHDATDNLERSNRNAEQASARDDAAQDDGAARKAISKTSNADATNMDVGVGAKDR-DGDAEASVKDARQADQAPPEMVAPGRPNQPHVLQA------------KNETKENSAGMDVSSLRTENENYRQRIKSLAEREQNARHNEREAKXXXXXXXXXXXXXXXEKTHADHFVSEQKLENRKLRESFSKSVDEAKVEKQEEMEEMKAAIXXXXXXXXELFEEKQLLSRMLSDEQRKLNELQEKIQHPDLGLWVRQRAERAAILVEGPETDAVKYYAQKYMAPKVTKMKHRLQMLENRVERSVDHLLPAKYGGFVAMLLSIGLIGFPVFVTLSTAVSLTKSFSLRQHVLVGNVFWTAFAVGLCVAGLVLRQDPLQTLYEASRSLFILLQLGMAVAYPAFLMVISCAVLRARDKVDVLVFGCELVFYAVIGMNYRSRVWRAAMLGEHIDTGPMMYAVYMVDFVAMMALTVSSSRTMGGSGMGGH--DVEDGFEKLSVHSGAGRGAASARGIVSLGSGLVQLAVGGKREQKDE 688          
BLAST of Gvermi12373.t1 vs. uniprot
Match: R7QQZ2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQZ2_CHOCR)

HSP 1 Score: 373 bits (957), Expect = 2.790e-118
Identity = 195/320 (60.94%), Postives = 259/320 (80.94%), Query Frame = 0
Query:  329 IEEQKRAFDELFEEKQMLSKMLADEQRKLDELQEKIQHPDLGQWVRQRAERAAILVEGPETDAIKYYASQYMAPKVTKMKHRLQMLENRVEQTVDHLLPAKYGSVVAMLLSIGLVGFPIFVTLSTVVSLTKGVSLRQYVLLGNVFLTAFAVGLGGVGLLLRQDPLQTLYEANGGMFIVLQLCIGVGYPLFLGVLMLTVMRCKDRLDMLVFGCELLFYVVIGMNYRARVWRPAMLGENIDCGTMMYVVYTMDFFAMTALTVASSR---STGVGALGGGVVDIEKGRGVEVGDGSGRAD-AGSKG----IGTLGSNLIQMAV 640
            IEE+KRAFDEL+EEKQ+L ++L +EQ+ L +LQEKIQHPDLG W+RQRAERAAILVE PETDA+K+YA +YMAPKVTKM+HRL +LE RVE++VDHLLP++YGSVVA++L IGL+GFP+FVT+STVV++TK VSLRQYVLLGNVFLTAF+ GL   G+LL+QDPLQTLYEA+  MF++LQL   V +P+F+GV+   V++ +D+ D+ VFGCEL+FY+++G+NYRARVWRPAMLG NI+   MMYVVY +DF +MTALT++S++   S     +G   VD+E+    ++  G+ ++D AG  G    +G LGS L++ A+
Sbjct:  233 IEERKRAFDELYEEKQVLGQILDEEQKTLHDLQEKIQHPDLGLWIRQRAERAAILVETPETDAMKFYARKYMAPKVTKMRHRLALLEKRVEKSVDHLLPSQYGSVVALMLCIGLIGFPVFVTMSTVVTVTKSVSLRQYVLLGNVFLTAFSSGLCIAGILLQQDPLQTLYEASESMFVILQLAAAVVFPVFIGVIFCAVLKARDQEDLFVFGCELVFYILVGLNYRARVWRPAMLGRNIETSRMMYVVYVIDFLSMTALTISSAKVGQSRLPSFVGDSYVDVER----DLSAGANKSDEAGGAGPRSSLGALGSGLMKAAI 548          
The following BLAST results are available for this feature:
BLAST of Gvermi12373.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IK38_9FLOR7.120e-16448.13Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QQZ2_CHOCR2.790e-11860.94Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 237..306
NoneNo IPR availableCOILSCoilCoilcoord: 311..363
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..277
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 231..254
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 255..277
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 145..183
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..113
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..110
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 551..569
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 590..649
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 455..465
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 466..488
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 527..532
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 489..502
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 430..454
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..30
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 503..526
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 533..550
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..429
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 570..589
NoneNo IPR availableTMHMMTMhelixcoord: 433..455
NoneNo IPR availableTMHMMTMhelixcoord: 504..526
NoneNo IPR availableTMHMMTMhelixcoord: 535..554
NoneNo IPR availableTMHMMTMhelixcoord: 569..591
NoneNo IPR availableTMHMMTMhelixcoord: 467..489

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4393895..4395844 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12373.t1Gvermi12373.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4393895..4395844 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12373.t1 ID=Gvermi12373.t1|Name=Gvermi12373.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=650bp
MCSSIVFLRATRVFVLTSLVITLFTHPVFSRETSDNSLSGASAPQSFVLR
RTLQQIQPNGDDSLDGDLKGSQRLAEAALQRQGIEEAQTAPENEQKEKGV
TKKPDEDDLNDVDAQIQEIAKRVGITEEELKQANILQSDTNNAAEVDGRL
DHHDMAEKQQSKNDAGREDILDARDKVDQLPPPPEEDVRQPAQAPPEMVA
PGQPLLRKVQKPGSIGKPQKPQDDKKGSPDSSIQSEASELTAQLETYKKR
LNSLLQSEQEARENERAARIEADELQKKMKSMKKEKKNAEQLVSERNADL
AKLRDSLPQIVKEAKDEERGEIEEMKETIEEQKRAFDELFEEKQMLSKML
ADEQRKLDELQEKIQHPDLGQWVRQRAERAAILVEGPETDAIKYYASQYM
APKVTKMKHRLQMLENRVEQTVDHLLPAKYGSVVAMLLSIGLVGFPIFVT
LSTVVSLTKGVSLRQYVLLGNVFLTAFAVGLGGVGLLLRQDPLQTLYEAN
GGMFIVLQLCIGVGYPLFLGVLMLTVMRCKDRLDMLVFGCELLFYVVIGM
NYRARVWRPAMLGENIDCGTMMYVVYTMDFFAMTALTVASSRSTGVGALG
GGVVDIEKGRGVEVGDGSGRADAGSKGIGTLGSNLIQMAVGSKRVEKAE*
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