Gvermi12371.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi12371.t1 vs. uniprot
Match: A0A2V3IK20_9FLOR (E3 ubiquitin-protein ligase RNF38 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK20_9FLOR) HSP 1 Score: 183 bits (465), Expect = 2.570e-53 Identity = 86/109 (78.90%), Postives = 95/109 (87.16%), Query Frame = 0
Query: 342 LQIHYFHEDHDTDHFLDYEHLIRLDDQLVREKNRADKDQIDSLPTKKATVEDKEIRCCICMCDVEEGEELRILPCSHKYHKSCIDEWLTYNGCCPVDKKRIAPNRPRRR 450
++IHY H D LDYEHLIRLD+QL+REKNRAD DQI+SLPT+KAT EDKE+RCCICMCDVEEGE LR+LPCSHKYH+SCIDEWLTYNGCCPVDKKRIAP R R R
Sbjct: 1 MEIHYLQGLHG-DRALDYEHLIRLDEQLLREKNRADNDQINSLPTRKATAEDKEVRCCICMCDVEEGEVLRVLPCSHKYHQSCIDEWLTYNGCCPVDKKRIAPRRSRGR 108
BLAST of Gvermi12371.t1 vs. uniprot
Match: R7QS17_CHOCR (RING-type domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QS17_CHOCR) HSP 1 Score: 174 bits (441), Expect = 2.130e-44 Identity = 79/94 (84.04%), Postives = 86/94 (91.49%), Query Frame = 0
Query: 357 LDYEHLIRLDDQLVREKNRADKDQIDSLPTKKATVEDKEIRCCICMCDVEEGEELRILPCSHKYHKSCIDEWLTYNGCCPVDKKRIAPNRPRRR 450
LDYE+LIRLD+QL+R+KNRAD QIDSLP +KAT DKEIRCC+CMCDVEEGEELR+LPCSHKYHK CIDEWLTYNGCCPVDKKRIAP R RRR
Sbjct: 549 LDYENLIRLDEQLMRDKNRADTSQIDSLPMQKATTADKEIRCCVCMCDVEEGEELRVLPCSHKYHKKCIDEWLTYNGCCPVDKKRIAPPRSRRR 642
BLAST of Gvermi12371.t1 vs. uniprot
Match: A0A7S0ZG11_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZG11_9RHOD) HSP 1 Score: 98.6 bits (244), Expect = 1.080e-18 Identity = 48/91 (52.75%), Postives = 59/91 (64.84%), Query Frame = 0
Query: 358 DYEHLIRLDDQLVREKNR---ADKDQIDSLPTKKATVEDKEIRCCICMCDVEEGEELRILPCSHKYHKSCIDEWLTYNGCCPVDKKRIAPN 445
+YE ++RLD+ L E R A+ I LP KATV+D E C IC+CD++ GE+LR LPCSH YH CIDEWL N CPVD +RI N
Sbjct: 338 EYESMLRLDEALEAESIRRRGANPTMISELPVYKATVKDTENSCRICLCDIQVGEDLRRLPCSHSYHPKCIDEWLKRNAICPVDNQRIDGN 428
BLAST of Gvermi12371.t1 vs. uniprot
Match: A0A7S1T786_9RHOD (Hypothetical protein n=2 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T786_9RHOD) HSP 1 Score: 87.0 bits (214), Expect = 3.870e-15 Identity = 38/85 (44.71%), Postives = 55/85 (64.71%), Query Frame = 0
Query: 358 DYEHLIRLDDQLVREKNRADKDQIDSLPTKKATVEDKEIRCCICMCDVEEGEELRILPCSHKYHKSCIDEWLTYNGCCPVDKKRI 442
DYE L+RLD+++ + A + SLPT AT E +CCIC+C+ EEGE ++ LPC H +H++C+D WL CP+DK+ I
Sbjct: 261 DYETLVRLDERIPNNRG-AQATVLQSLPTSLATARMTEEQCCICLCNYEEGETVKRLPCLHVFHQTCVDAWLERQASCPIDKRSI 344
BLAST of Gvermi12371.t1 vs. uniprot
Match: F0ZRJ6_DICPU (RING-type domain-containing protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZRJ6_DICPU) HSP 1 Score: 76.6 bits (187), Expect = 1.470e-13 Identity = 38/96 (39.58%), Postives = 54/96 (56.25%), Query Frame = 0
Query: 358 DYEHLIRLDDQLVREK-----------NRADKDQIDSLPTKKATVEDKEIRCCICMCDVEEGEELRILPCSHKYHKSCIDEWLTYNGCCPVDKKRI 442
DY+ L+ LDD + + ++ DK+Q + T + CCIC+C++E GEE+R LPC H +H +CID+WL N CPVDKK I
Sbjct: 9 DYDLLLSLDDNINNKGATNTEIIKLPVHKIDKNQATNPENNGPTTNET---CCICLCEMENGEEVRTLPCKHFFHVTCIDQWLKVNKVCPVDKKAI 101
BLAST of Gvermi12371.t1 vs. uniprot
Match: A0A0S7I2L2_9TELE (RN167 (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7I2L2_9TELE) HSP 1 Score: 77.4 bits (189), Expect = 9.930e-13 Identity = 36/76 (47.37%), Postives = 47/76 (61.84%), Query Frame = 0
Query: 373 KNRADKDQIDSLPTKKATVEDKEIRCCICMCDVEEGEELRILPCSHKYHKSCIDEWLTYNG-CCPVDKKRIAPNRP 447
KNR K+Q+ +PT K D C IC+ + EEG++LR+LPCSH YH C+D WLT CPV K+R+ N P
Sbjct: 121 KNRLTKEQLKRIPTHKFRKGDDYDLCAICLDEYEEGDKLRVLPCSHAYHCKCVDPWLTLTKKTCPVCKQRVTRNNP 196
BLAST of Gvermi12371.t1 vs. uniprot
Match: UPI00102D6799 (E3 ubiquitin-protein ligase RNF13 n=1 Tax=Homo sapiens TaxID=9606 RepID=UPI00102D6799) HSP 1 Score: 73.2 bits (178), Expect = 1.230e-12 Identity = 34/73 (46.58%), Postives = 46/73 (63.01%), Query Frame = 0
Query: 374 NRADKDQIDSLPTKKATVEDKEIRCCICMCDVEEGEELRILPCSHKYHKSCIDEWLTYNG-CCPVDKKRIAPN 445
NR KDQ+ LP K D+ C IC+ + E+G++LRILPCSH YH C+D WLT CPV K+++ P+
Sbjct: 2 NRLRKDQLKKLPVHKFKKGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPS 74
BLAST of Gvermi12371.t1 vs. uniprot
Match: A0A1A8ALF1_NOTFU (RING-type E3 ubiquitin transferase n=7 Tax=Nothobranchiidae TaxID=405002 RepID=A0A1A8ALF1_NOTFU) HSP 1 Score: 79.7 bits (195), Expect = 1.610e-12 Identity = 37/76 (48.68%), Postives = 47/76 (61.84%), Query Frame = 0
Query: 373 KNRADKDQIDSLPTKKATVEDKEIRCCICMCDVEEGEELRILPCSHKYHKSCIDEWLTYNG-CCPVDKKRIAPNRP 447
KNR KDQ+ +PT D C IC+ + EEG++LR+LPCSH YH C+D WLT N CPV K+R+ N P
Sbjct: 213 KNRLTKDQLKRIPTHTFKKGDDYDVCAICLDEYEEGDKLRVLPCSHAYHSKCVDPWLTQNKKTCPVCKQRVIQNNP 288
BLAST of Gvermi12371.t1 vs. uniprot
Match: F4PRR3_CAVFA (RING-type domain-containing protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PRR3_CAVFA) HSP 1 Score: 80.1 bits (196), Expect = 2.540e-12 Identity = 36/85 (42.35%), Postives = 53/85 (62.35%), Query Frame = 0
Query: 358 DYEHLIRLDDQLVREKNRADKDQIDSLPTKKATVEDKEIRCCICMCDVEEGEELRILPCSHKYHKSCIDEWLTYNGCCPVDKKRI 442
DYE L++LD+ + + +A +I LPT K K CCIC+C++E G+ ++ LPC+H +H CID WL N CP+DK+ I
Sbjct: 590 DYELLLQLDENVNNKGAQAT--EIKQLPTHKIKTGSKIDTCCICLCEMEIGQNVKSLPCTHYFHTECIDNWLKINKICPIDKQSI 672
BLAST of Gvermi12371.t1 vs. uniprot
Match: A0A672JPK0_SALFA (RING-type E3 ubiquitin transferase n=2 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672JPK0_SALFA) HSP 1 Score: 79.0 bits (193), Expect = 2.960e-12 Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = 0
Query: 373 KNRADKDQIDSLPTKKATVEDKEIRCCICMCDVEEGEELRILPCSHKYHKSCIDEWLTYNG-CCPVDKKRIAPNRP 447
KNR K+Q+ +PT + T D C IC+ + EEG++LR+LPCSH YH C+D WLT CPV K+R+ N P
Sbjct: 216 KNRLSKEQLKKIPTHRFTKGDDYDVCAICLDEYEEGDKLRVLPCSHAYHCKCVDPWLTQTKKTCPVCKQRVTRNNP 291 The following BLAST results are available for this feature:
BLAST of Gvermi12371.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi12371.t1 ID=Gvermi12371.t1|Name=Gvermi12371.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=457bpback to top |