Gvermi12370.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi12370.t1
Unique Name	Gvermi12370.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	130

Homology

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BLAST of Gvermi12370.t1 vs. uniprot
Match: R7QRQ3_CHOCR (40S ribosomal protein S15a n=2 Tax=Rhodymeniophycidae TaxID=2045261 RepID=R7QRQ3_CHOCR)

HSP 1 Score: 247 bits (630), Expect = 9.650e-83
Identity = 120/129 (93.02%), Postives = 124/129 (96.12%), Query Frame = 0

Query:    1 MRMSVLADALKTLSNAEKRGKRQVLLRPSSKVVIKFLQVMQNHGYIGEFEFVDDHRAGKIVVNLIGRLNKCGVISPRFDVGVGEIEKWVTNLLPSRQFGYIVLTTSYGIMDHEEARRKHTGGKILGFFY 129
            MRMSVL DALKTL+NAEKRGKRQVLLRPSSKV+IKFLQVMQ HGYIGEFE VDDHRAGKIVVNLIGRLNKCGVISPRFDV V EIEKWVTNLLPSRQFG+I+LTTSYGIMDHEEARRKHTGGKILGFFY
Sbjct:    1 MRMSVLGDALKTLANAEKRGKRQVLLRPSSKVIIKFLQVMQTHGYIGEFEVVDDHRAGKIVVNLIGRLNKCGVISPRFDVSVNEIEKWVTNLLPSRQFGFIMLTTSYGIMDHEEARRKHTGGKILGFFY 129

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BLAST of Gvermi12370.t1 vs. uniprot
Match: A0A1X6NLV8_PORUM (Uncharacterized protein n=2 Tax=Bangiaceae TaxID=31345 RepID=A0A1X6NLV8_PORUM)

HSP 1 Score: 243 bits (620), Expect = 3.340e-81
Identity = 118/129 (91.47%), Postives = 122/129 (94.57%), Query Frame = 0

Query:    1 MRMSVLADALKTLSNAEKRGKRQVLLRPSSKVVIKFLQVMQNHGYIGEFEFVDDHRAGKIVVNLIGRLNKCGVISPRFDVGVGEIEKWVTNLLPSRQFGYIVLTTSYGIMDHEEARRKHTGGKILGFFY 129
            +RMSVL DALKTLSNAEKRGKRQVLLRPSSKVVIKFLQVMQ HGYIGEFE+VDDHRAGKIVVNLIGRLNKCGVISPRFD+ VG IE WV NLLPSRQFGYI+LTTSYGIMDHEEAR KHTGGKILGFFY
Sbjct:    2 VRMSVLGDALKTLSNAEKRGKRQVLLRPSSKVVIKFLQVMQTHGYIGEFEYVDDHRAGKIVVNLIGRLNKCGVISPRFDIKVGSIENWVNNLLPSRQFGYIMLTTSYGIMDHEEARAKHTGGKILGFFY 130

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BLAST of Gvermi12370.t1 vs. uniprot
Match: A0A7S1TD80_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TD80_9RHOD)

HSP 1 Score: 238 bits (606), Expect = 4.560e-79
Identity = 112/129 (86.82%), Postives = 123/129 (95.35%), Query Frame = 0

Query:    1 MRMSVLADALKTLSNAEKRGKRQVLLRPSSKVVIKFLQVMQNHGYIGEFEFVDDHRAGKIVVNLIGRLNKCGVISPRFDVGVGEIEKWVTNLLPSRQFGYIVLTTSYGIMDHEEARRKHTGGKILGFFY 129
            +RMSVLADAL+T+SNAEKRGKRQV+LRPSSKV+IKFLQVMQ HGY+GEFE VDDHRAGKIVV+L GR+NKCG ISPR+D+ VGEIEKWV NLLPSRQFGYI+LTTSYGIMDHEEARRKHTGGKILGFFY
Sbjct:    2 VRMSVLADALRTMSNAEKRGKRQVMLRPSSKVLIKFLQVMQKHGYLGEFEIVDDHRAGKIVVHLTGRINKCGAISPRYDIKVGEIEKWVNNLLPSRQFGYIMLTTSYGIMDHEEARRKHTGGKILGFFY 130

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BLAST of Gvermi12370.t1 vs. uniprot
Match: A0A7S0G592_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G592_9RHOD)

HSP 1 Score: 234 bits (597), Expect = 1.080e-77
Identity = 112/129 (86.82%), Postives = 121/129 (93.80%), Query Frame = 0

Query:    1 MRMSVLADALKTLSNAEKRGKRQVLLRPSSKVVIKFLQVMQNHGYIGEFEFVDDHRAGKIVVNLIGRLNKCGVISPRFDVGVGEIEKWVTNLLPSRQFGYIVLTTSYGIMDHEEARRKHTGGKILGFFY 129
            +RMSVLAD+LKTLSNAEK+GKRQVL+RPSSKVVIKFLQVMQ HGYIGEFEFVDDHR GK+VV L GRLNKC VISPR+D+ V EIEKWV NLLPSRQFGYI+L+TSYGIMDHEEARRKHTGGKILGFFY
Sbjct:    2 VRMSVLADSLKTLSNAEKKGKRQVLIRPSSKVVIKFLQVMQKHGYIGEFEFVDDHRGGKVVVILTGRLNKCRVISPRYDISVKEIEKWVNNLLPSRQFGYIILSTSYGIMDHEEARRKHTGGKILGFFY 130

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BLAST of Gvermi12370.t1 vs. uniprot
Match: A0A7S3PA85_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PA85_9STRA)

HSP 1 Score: 231 bits (588), Expect = 2.540e-76
Identity = 109/129 (84.50%), Postives = 121/129 (93.80%), Query Frame = 0

Query:    1 MRMSVLADALKTLSNAEKRGKRQVLLRPSSKVVIKFLQVMQNHGYIGEFEFVDDHRAGKIVVNLIGRLNKCGVISPRFDVGVGEIEKWVTNLLPSRQFGYIVLTTSYGIMDHEEARRKHTGGKILGFFY 129
            +RMSVLADALKT+SNAEKRGKRQVLLRPSSKV++KFLQ MQ HGYIGEFE VDDHR+GKIVV L GR+NKCGV+SPRFDV V ++EKWV NLLPSRQFG+IVLTT+YGIMDHEEARRKHTGGK+LGFFY
Sbjct:    2 VRMSVLADALKTMSNAEKRGKRQVLLRPSSKVIVKFLQCMQKHGYIGEFEIVDDHRSGKIVVELNGRINKCGVVSPRFDVQVKDMEKWVGNLLPSRQFGHIVLTTAYGIMDHEEARRKHTGGKVLGFFY 130

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BLAST of Gvermi12370.t1 vs. uniprot
Match: M2XL41_GALSU (40S ribosomal protein S15A n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XL41_GALSU)

HSP 1 Score: 229 bits (584), Expect = 1.030e-75
Identity = 107/129 (82.95%), Postives = 123/129 (95.35%), Query Frame = 0

Query:    1 MRMSVLADALKTLSNAEKRGKRQVLLRPSSKVVIKFLQVMQNHGYIGEFEFVDDHRAGKIVVNLIGRLNKCGVISPRFDVGVGEIEKWVTNLLPSRQFGYIVLTTSYGIMDHEEARRKHTGGKILGFFY 129
            +RMSVLADAL +++NAE+RGKRQVLLRPSSKV+I+FLQVMQ HGYIGEFE VDDHR+GK+VV+LIGRLNKCGVISPR+DV V E+E+W +NLLPSRQFG++VLTTSYGIMDHEEARRKHTGGKILGFFY
Sbjct:    2 VRMSVLADALNSIANAERRGKRQVLLRPSSKVIIRFLQVMQKHGYIGEFELVDDHRSGKLVVHLIGRLNKCGVISPRYDVKVHEMEQWASNLLPSRQFGFVVLTTSYGIMDHEEARRKHTGGKILGFFY 130

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BLAST of Gvermi12370.t1 vs. uniprot
Match: A0A8E8PJK2_9STRA (Ribosomal protein S15A n=2 Tax=Placidida sp. TaxID=2810146 RepID=A0A8E8PJK2_9STRA)

HSP 1 Score: 228 bits (582), Expect = 2.090e-75
Identity = 109/129 (84.50%), Postives = 121/129 (93.80%), Query Frame = 0

Query:    1 MRMSVLADALKTLSNAEKRGKRQVLLRPSSKVVIKFLQVMQNHGYIGEFEFVDDHRAGKIVVNLIGRLNKCGVISPRFDVGVGEIEKWVTNLLPSRQFGYIVLTTSYGIMDHEEARRKHTGGKILGFFY 129
            +RMSVLADALKTLSNAEKRGKRQVLLRPSSKV+IKFLQVMQ +GY+GEFE VDD RAGKIVVNL GR+NKCGVISPRFDV V ++EKWV NLLPSRQFG++VLTTS GIMDHEEAR++HTGGK+LGFFY
Sbjct:    2 VRMSVLADALKTLSNAEKRGKRQVLLRPSSKVIIKFLQVMQKNGYVGEFELVDDRRAGKIVVNLTGRINKCGVISPRFDVPVKDMEKWVANLLPSRQFGHVVLTTSQGIMDHEEARKRHTGGKVLGFFY 130

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BLAST of Gvermi12370.t1 vs. uniprot
Match: A0A812JFE9_9DINO (RPS15A protein n=2 Tax=Sar TaxID=2698737 RepID=A0A812JFE9_9DINO)

HSP 1 Score: 227 bits (578), Expect = 8.500e-75
Identity = 108/129 (83.72%), Postives = 120/129 (93.02%), Query Frame = 0

Query:    1 MRMSVLADALKTLSNAEKRGKRQVLLRPSSKVVIKFLQVMQNHGYIGEFEFVDDHRAGKIVVNLIGRLNKCGVISPRFDVGVGEIEKWVTNLLPSRQFGYIVLTTSYGIMDHEEARRKHTGGKILGFFY 129
            +RMSVLAD LKT+ NAEKRGKRQVL+RP+SKV++KFLQVMQ HGYIG+FE VDDHRAGKIVV L GR+NKCGVISPRFDV V EIEKW+++LLPSRQFG+IVLTTS GIMDHEEARRKHTGGKILGFFY
Sbjct:    2 VRMSVLADCLKTIYNAEKRGKRQVLVRPASKVIVKFLQVMQKHGYIGDFELVDDHRAGKIVVQLTGRINKCGVISPRFDVTVPEIEKWISSLLPSRQFGHIVLTTSAGIMDHEEARRKHTGGKILGFFY 130

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BLAST of Gvermi12370.t1 vs. uniprot
Match: A0A2R5GX50_9STRA (40S ribosomal protein S15a n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GX50_9STRA)

HSP 1 Score: 227 bits (578), Expect = 8.500e-75
Identity = 110/129 (85.27%), Postives = 120/129 (93.02%), Query Frame = 0

Query:    1 MRMSVLADALKTLSNAEKRGKRQVLLRPSSKVVIKFLQVMQNHGYIGEFEFVDDHRAGKIVVNLIGRLNKCGVISPRFDVGVGEIEKWVTNLLPSRQFGYIVLTTSYGIMDHEEARRKHTGGKILGFFY 129
            +RM+VLADALKTLSNAEKRGK+QVL+RP SKV+IKFL+VMQ HGYIGEFE VDDHR+GKIVV L GRLNKCGVISPRFDV VG+IEKWV NLLPSRQFG+I+LTTS GIMDHEEARRK TGGKILGFFY
Sbjct:    2 VRMNVLADALKTLSNAEKRGKKQVLIRPCSKVIIKFLKVMQAHGYIGEFEVVDDHRSGKIVVELTGRLNKCGVISPRFDVQVGDIEKWVGNLLPSRQFGHIILTTSAGIMDHEEARRKQTGGKILGFFY 130

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BLAST of Gvermi12370.t1 vs. uniprot
Match: A0A836CHB7_9STRA (Ribosomal protein S8 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHB7_9STRA)

HSP 1 Score: 226 bits (577), Expect = 1.210e-74
Identity = 106/129 (82.17%), Postives = 119/129 (92.25%), Query Frame = 0

Query:    1 MRMSVLADALKTLSNAEKRGKRQVLLRPSSKVVIKFLQVMQNHGYIGEFEFVDDHRAGKIVVNLIGRLNKCGVISPRFDVGVGEIEKWVTNLLPSRQFGYIVLTTSYGIMDHEEARRKHTGGKILGFFY 129
            +RMSVLAD LKTLSNAEKRGKRQVL+RPSSKVV+KFLQ MQ HGYIGEFE VDDHRAGKIV+ L GR+NKCGVISPRFDV + +IEKW+ NLLP+R FG+IVL+T+YGIMDHEEARRKHTGGK+LGFFY
Sbjct:    2 VRMSVLADTLKTLSNAEKRGKRQVLIRPSSKVVVKFLQCMQKHGYIGEFEIVDDHRAGKIVIELTGRINKCGVISPRFDVPLADIEKWMVNLLPARGFGHIVLSTTYGIMDHEEARRKHTGGKVLGFFY 130

The following BLAST results are available for this feature:

BLAST of Gvermi12370.t1 vs. uniprot

BLAST of Gvermi12370.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
R7QRQ3_CHOCR	9.650e-83	93.02	40S ribosomal protein S15a n=2 Tax=Rhodymeniophyci...	[more]
A0A1X6NLV8_PORUM	3.340e-81	91.47	Uncharacterized protein n=2 Tax=Bangiaceae TaxID=3...	[more]
A0A7S1TD80_9RHOD	4.560e-79	86.82	Hypothetical protein n=1 Tax=Compsopogon caeruleus...	[more]
A0A7S0G592_9RHOD	1.080e-77	86.82	Hypothetical protein n=1 Tax=Rhodosorus marinus Ta...	[more]
A0A7S3PA85_9STRA	2.540e-76	84.50	Hypothetical protein n=1 Tax=Aplanochytrium stocch...	[more]
M2XL41_GALSU	1.030e-75	82.95	40S ribosomal protein S15A n=1 Tax=Galdieria sulph...	[more]
A0A8E8PJK2_9STRA	2.090e-75	84.50	Ribosomal protein S15A n=2 Tax=Placidida sp. TaxID...	[more]
A0A812JFE9_9DINO	8.500e-75	83.72	RPS15A protein n=2 Tax=Sar TaxID=2698737 RepID=A0A...	[more]
A0A2R5GX50_9STRA	8.500e-75	85.27	40S ribosomal protein S15a n=1 Tax=Hondaea ferment...	[more]
A0A836CHB7_9STRA	1.210e-74	82.17	Ribosomal protein S8 n=1 Tax=Tribonema minus TaxID...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000630	Ribosomal protein S8	PFAM	PF00410	Ribosomal_S8	coord: 6..129 e-value: 1.1E-20 score: 73.9
IPR000630	Ribosomal protein S8	PANTHER	PTHR11758	40S RIBOSOMAL PROTEIN S15A	coord: 2..129
IPR000630	Ribosomal protein S8	PROSITE	PS00053	RIBOSOMAL_S8	coord: 99..116
IPR000630	Ribosomal protein S8	HAMAP	MF_01302_A	Ribosomal_S8_A	coord: 1..129 score: 32.015747
None	No IPR available	GENE3D	3.30.1490.10		coord: 69..129 e-value: 8.0E-37 score: 126.6
None	No IPR available	GENE3D	3.30.1370.30		coord: 1..68 e-value: 8.8E-35 score: 120.4
None	No IPR available	PANTHER	PTHR11758:SF39	OS02G0478600 PROTEIN	coord: 2..129
IPR035987	Ribosomal protein S8 superfamily	SUPERFAMILY	56047	Ribosomal protein S8	coord: 1..129

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_3404	contig	ScGOVlb_3404:4389336..4389725 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi12370.t1	Gvermi12370.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_3404 4389336..4389725 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi12370.t1 ID=Gvermi12370.t1|Name=Gvermi12370.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=130bp
MRMSVLADALKTLSNAEKRGKRQVLLRPSSKVVIKFLQVMQNHGYIGEFE
FVDDHRAGKIVVNLIGRLNKCGVISPRFDVGVGEIEKWVTNLLPSRQFGY
IVLTTSYGIMDHEEARRKHTGGKILGFFY*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000630	Ribosomal_S8
IPR035987	Ribosomal_S8_sf