Gvermi12368.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12368.t1
Unique NameGvermi12368.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length160
Homology
BLAST of Gvermi12368.t1 vs. uniprot
Match: A0A2V3IK50_9FLOR (60S ribosomal protein L21-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK50_9FLOR)

HSP 1 Score: 268 bits (686), Expect = 2.600e-90
Identity = 133/159 (83.65%), Postives = 147/159 (92.45%), Query Frame = 0
Query:    1 MVRSNGKRTNTRHLFKKAFRKKGPEHLSTYLQTFKVGDFVDIHINPAVMKGMPHKFYQGRTGRVFNISRTAVGVEVSKQVGNRIMMKRFHIRTEHVKKSRCNEDFKHRAQQREKEAREAHKRGEKYVINKRTPVLPACAHVVDASTMELVEPIPYEFVV 159
            MVRSNGKR NTRHLFKK+FRKKGPEH+STYLQTF VGDFVDIHINPAVMKGMPHKFYQGRTGR+FN+SRTAVGVEVSKQVGN+I+MKRFHIR EH+ KSRC+EDF+ R  QRE++AR A +RGEKYV+ KRTPVLP  AHVVDA+TMELVEPIPYEFVV
Sbjct:    1 MVRSNGKRANTRHLFKKSFRKKGPEHVSTYLQTFHVGDFVDIHINPAVMKGMPHKFYQGRTGRIFNVSRTAVGVEVSKQVGNQILMKRFHIRIEHINKSRCSEDFRKRVLQREQDARGARERGEKYVVQKRTPVLPPNAHVVDATTMELVEPIPYEFVV 159          
BLAST of Gvermi12368.t1 vs. uniprot
Match: R7QRP4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRP4_CHOCR)

HSP 1 Score: 256 bits (655), Expect = 1.380e-85
Identity = 128/159 (80.50%), Postives = 143/159 (89.94%), Query Frame = 0
Query:    1 MVRSNGKRTNTRHLFKKAFRKKGPEHLSTYLQTFKVGDFVDIHINPAVMKGMPHKFYQGRTGRVFNISRTAVGVEVSKQVGNRIMMKRFHIRTEHVKKSRCNEDFKHRAQQREKEAREAHKRGEKYVINKRTPVLPACAHVVDASTMELVEPIPYEFVV 159
            MVRSNGKR NTR LF+KAFRKKG EHLSTYLQ FK+GDFVDIHINPAVMKGMPHKFYQGR+GRVFN+SRT+VGVEVSK VGNRIMMKRFHIRTEHV+KSRCNED+  R + RE EAREAH +G+KY + KRTP LP+ AH+VDAS MELV+PIPYEF+V
Sbjct:    1 MVRSNGKRANTRDLFRKAFRKKGNEHLSTYLQIFKIGDFVDIHINPAVMKGMPHKFYQGRSGRVFNVSRTSVGVEVSKTVGNRIMMKRFHIRTEHVQKSRCNEDYLKRCKGREMEAREAHSKGDKYNVIKRTPALPSEAHIVDASKMELVDPIPYEFIV 159          
BLAST of Gvermi12368.t1 vs. uniprot
Match: Q7XYA8_GRIJA (60S ribosome protein L21 n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XYA8_GRIJA)

HSP 1 Score: 237 bits (605), Expect = 5.730e-78
Identity = 120/159 (75.47%), Postives = 135/159 (84.91%), Query Frame = 0
Query:    1 MVRSNGKRTNTRHLFKKAFRKKGPEHLSTYLQTFKVGDFVDIHINPAVMKGMPHKFYQGRTGRVFNISRTAVGVEVSKQVGNRIMMKRFHIRTEHVKKSRCNEDFKHRAQQREKEAREAHKRGEKYVINKRTPVLPACAHVVDASTMELVEPIPYEFVV 159
            MVRSNGKR NTR LFKKAFRK G EH STYLQ FK+G++VDIHINP +MKGMPHKFY GRTGRVFN+SRTAVGVEVSK+V +RI+ KRFHIR EHV+KS+CN+DF  R + RE EA+EAHKRGEKY + KRTP LP  AH+V A  MELVEPIPYEFVV
Sbjct:    1 MVRSNGKRANTRDLFKKAFRKSGNEHTSTYLQVFKIGEYVDIHINPTIMKGMPHKFYHGRTGRVFNVSRTAVGVEVSKRVRHRIINKRFHIRIEHVRKSQCNKDFLDRCKLREIEAQEAHKRGEKYTVVKRTPALPRDAHLVTAGEMELVEPIPYEFVV 159          
BLAST of Gvermi12368.t1 vs. uniprot
Match: A0A6T6CI30_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6CI30_9RHOD)

HSP 1 Score: 197 bits (500), Expect = 5.530e-62
Identity = 98/159 (61.64%), Postives = 124/159 (77.99%), Query Frame = 0
Query:    1 MVRSNGKRTNTRHLFKKAFRKKGPEHLSTYLQTFKVGDFVDIHINPAVMKGMPHKFYQGRTGRVFNISRTAVGVEVSKQVGNRIMMKRFHIRTEHVKKSRCNEDFKHRAQQREKEAREAHKRGEKYVINKRTPVLPACAHVVDASTMELVEPIPYEFVV 159
            MVRS GKR+NTR LFK+ FRK G   +STYL  FK+G++VDI  N A+ +GMP K+Y GRTG++FN+SR AVGVEV+KQVGNRI+ KRFH+R EHVKKSRC+EDFK R ++R+   REA ++GEK + +KR PV P  AHVV  S M  +EP+PY+FVV
Sbjct:    1 MVRSGGKRSNTRDLFKRPFRKNGMPSISTYLTNFKIGEYVDIVANAAIQQGMPFKYYHGRTGKIFNVSRAAVGVEVTKQVGNRIIPKRFHVRIEHVKKSRCSEDFKKRVRERDAMRREAREKGEKLISDKRKPVTPPEAHVVSGSNMVYLEPLPYKFVV 159          
BLAST of Gvermi12368.t1 vs. uniprot
Match: A0A7J7KUK8_9MAGN (Uncharacterized protein n=28 Tax=Magnoliopsida TaxID=3398 RepID=A0A7J7KUK8_9MAGN)

HSP 1 Score: 170 bits (431), Expect = 2.000e-51
Identity = 87/158 (55.06%), Postives = 117/158 (74.05%), Query Frame = 0
Query:    1 MVRSNGKRTNTRHLFKKAFRKKGPEHLSTYLQTFKVGDFVDIHINPAVMKGMPHKFYQGRTGRVFNISRTAVGVEVSKQVGNRIMMKRFHIRTEHVKKSRCNEDFKHRAQQREKEAREAHKRGEKYVINKRTPVLPACAHVVDASTMELVEPIPYEFV 158
            M   +G R+ TR LF +AFRKKG   LSTYL+T+++GD+VD+ +N AV KGMPHKFY GRTG+V+N+++ A+GVE++KQVGNRI+ KR H+R EHV+ SRC E+FKHR  Q +K   EA  RGEK +  KR P+ P    +V+ +T+E V PIPY+ V
Sbjct:    1 MPAGHGLRSRTRDLFSRAFRKKGYIPLSTYLKTYRIGDYVDVKVNGAVHKGMPHKFYHGRTGKVWNVTKRAIGVEINKQVGNRIIRKRIHVRIEHVQPSRCEEEFKHRKIQNDKLKGEAKARGEK-ISTKRQPLGPKPGFMVEGATLETVTPIPYDVV 157          
BLAST of Gvermi12368.t1 vs. uniprot
Match: A0A2U1LJ26_ARTAN (Ribosomal protein L21e n=26 Tax=cellular organisms TaxID=131567 RepID=A0A2U1LJ26_ARTAN)

HSP 1 Score: 165 bits (418), Expect = 1.880e-49
Identity = 84/158 (53.16%), Postives = 115/158 (72.78%), Query Frame = 0
Query:    1 MVRSNGKRTNTRHLFKKAFRKKGPEHLSTYLQTFKVGDFVDIHINPAVMKGMPHKFYQGRTGRVFNISRTAVGVEVSKQVGNRIMMKRFHIRTEHVKKSRCNEDFKHRAQQREKEAREAHKRGEKYVINKRTPVLPACAHVVDASTMELVEPIPYEFV 158
            M   +G R+ TR LF + FRKKG  HLSTYL+T+ VGD+VD+ +N AV KGMPHKFY GRTG+V+N+++ A+GVE++KQVGNRI+ KR H+R EHV  SRC E+FK R ++ ++   EA  +GEK +  KR P+ P    +V+ +T+E V PIPY+ V
Sbjct:    1 MPAGHGLRSRTRDLFARGFRKKGTIHLSTYLRTYHVGDYVDVKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEMNKQVGNRIIKKRIHVRIEHVMPSRCTEEFKQRVKKNDQLKAEAKAKGEK-ISTKRQPLGPKPGFMVEGTTLETVTPIPYDVV 157          
BLAST of Gvermi12368.t1 vs. uniprot
Match: A0A4D9B9I2_SALSN (Large subunit ribosomal protein L21e n=7 Tax=Lamiales TaxID=4143 RepID=A0A4D9B9I2_SALSN)

HSP 1 Score: 165 bits (418), Expect = 1.880e-49
Identity = 83/158 (52.53%), Postives = 115/158 (72.78%), Query Frame = 0
Query:    1 MVRSNGKRTNTRHLFKKAFRKKGPEHLSTYLQTFKVGDFVDIHINPAVMKGMPHKFYQGRTGRVFNISRTAVGVEVSKQVGNRIMMKRFHIRTEHVKKSRCNEDFKHRAQQREKEAREAHKRGEKYVINKRTPVLPACAHVVDASTMELVEPIPYEFV 158
            M   +G R+ TR  F +AFRKKGP HL+TYL+ FK+GD+VD+ +N ++ KGMPHKFY GRTGRV+N+++ AVGVEV+KQVGNRI+ KR H+R EHV+ SRC+E+ + R ++ +K   EA  +G K +  KR P  P    +V+ +T+E V PIPY+ V
Sbjct:    1 MPAGHGLRSRTRDSFSRAFRKKGPTHLTTYLRIFKIGDYVDVKVNGSIHKGMPHKFYHGRTGRVWNVTKRAVGVEVNKQVGNRIIRKRIHVRVEHVQPSRCHEEIQERIKKNDKLKAEAKAQG-KIISTKRQPEGPKPGFMVEGATLETVTPIPYDVV 157          
BLAST of Gvermi12368.t1 vs. uniprot
Match: A0A4D8XZ09_SALSN (Large subunit ribosomal protein L21e n=3 Tax=Lamiales TaxID=4143 RepID=A0A4D8XZ09_SALSN)

HSP 1 Score: 164 bits (416), Expect = 3.780e-49
Identity = 83/158 (52.53%), Postives = 115/158 (72.78%), Query Frame = 0
Query:    1 MVRSNGKRTNTRHLFKKAFRKKGPEHLSTYLQTFKVGDFVDIHINPAVMKGMPHKFYQGRTGRVFNISRTAVGVEVSKQVGNRIMMKRFHIRTEHVKKSRCNEDFKHRAQQREKEAREAHKRGEKYVINKRTPVLPACAHVVDASTMELVEPIPYEFV 158
            M   +G R+ TR  F +AFRKKGP HL+TYL+ FK+GD+VD+ +N ++ KGMPHKFY GRTGRV+NI++ AVGVEV+KQVGNRI+ KR H+R EHV+ SRC+E+ + R ++ +K   +A  +G K +  KR P  P    +V+ +T+E V PIPY+ V
Sbjct:    1 MPAGHGLRSRTRDSFSRAFRKKGPTHLTTYLRIFKIGDYVDVKVNGSIHKGMPHKFYHGRTGRVWNITKRAVGVEVNKQVGNRIIRKRIHVRVEHVQPSRCHEEIQERIKRNDKLKADAKAQG-KIISTKRQPEGPKPGFMVEGATLETVTPIPYDVV 157          
BLAST of Gvermi12368.t1 vs. uniprot
Match: A0A6I9TKN7_SESIN (60S ribosomal protein L21-1-like n=14 Tax=Lamiales TaxID=4143 RepID=A0A6I9TKN7_SESIN)

HSP 1 Score: 164 bits (415), Expect = 5.360e-49
Identity = 82/158 (51.90%), Postives = 114/158 (72.15%), Query Frame = 0
Query:    1 MVRSNGKRTNTRHLFKKAFRKKGPEHLSTYLQTFKVGDFVDIHINPAVMKGMPHKFYQGRTGRVFNISRTAVGVEVSKQVGNRIMMKRFHIRTEHVKKSRCNEDFKHRAQQREKEAREAHKRGEKYVINKRTPVLPACAHVVDASTMELVEPIPYEFV 158
            M   +G+R  TR LF + FRKKGP HLSTYL+ +K+G +VD+ +N ++ KGMPHKFY GRTGRV+N+++ AVGVEV+KQVGNRI+ KR H+R EHV+ SRC+E+  HR ++ ++   EA  +G K +  KR P  P    +V+ +T+E V PIPY+ V
Sbjct:    1 MPAGHGQRARTRDLFARPFRKKGPTHLSTYLRIYKIGQYVDVKVNGSIHKGMPHKFYHGRTGRVWNVTKRAVGVEVNKQVGNRIIKKRIHVRVEHVQPSRCHEEVMHRIKRNDQLKAEAKAQG-KIISTKRQPEGPKPGFMVEGATLETVTPIPYDVV 157          
BLAST of Gvermi12368.t1 vs. uniprot
Match: T2MFP5_HYDVU (60S ribosomal protein L21 n=1 Tax=Hydra vulgaris TaxID=6087 RepID=T2MFP5_HYDVU)

HSP 1 Score: 163 bits (413), Expect = 9.520e-49
Identity = 88/161 (54.66%), Postives = 114/161 (70.81%), Query Frame = 0
Query:    1 MVRSNGKRTNTRHLFKKAFRKKGPEHLSTYLQTFKVGDFVDIHINPAVMKGMPHKFYQGRTGRVFNISRTAVGVEVSKQVGNRIMMKRFHIRTEHVKKSRCNEDFKHRAQQREKEAREAHKRGEKYVINKRTPVLPACAHVVDASTME--LVEPIPYEFVV 159
            M    GKR  TR+LF K FRK G EHLSTYL+T+KVGD VD+  N A+ KGMP+KFY G+TGRVFN++++AVGV V+KQ+GNRI+ K+ ++R EHVK S+C +DF  R ++ E + R A   G K V  +R PVLP  AH V +      LVEPIPYEF++
Sbjct:    1 MTNPKGKRRGTRYLFSKKFRKHGVEHLSTYLKTYKVGDIVDVKGNGAIQKGMPYKFYHGKTGRVFNVTKSAVGVVVNKQLGNRIIPKKINVRIEHVKHSKCRDDFLRRVKENEVKKRAAKATGAK-VDCRRQPVLPREAHFVSSKNNAPILVEPIPYEFII 160          
The following BLAST results are available for this feature:
BLAST of Gvermi12368.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IK50_9FLOR2.600e-9083.6560S ribosomal protein L21-2 n=1 Tax=Gracilariopsis... [more]
R7QRP4_CHOCR1.380e-8580.50Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
Q7XYA8_GRIJA5.730e-7875.4760S ribosome protein L21 n=1 Tax=Griffithsia japon... [more]
A0A6T6CI30_9RHOD5.530e-6261.64Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7J7KUK8_9MAGN2.000e-5155.06Uncharacterized protein n=28 Tax=Magnoliopsida Tax... [more]
A0A2U1LJ26_ARTAN1.880e-4953.16Ribosomal protein L21e n=26 Tax=cellular organisms... [more]
A0A4D9B9I2_SALSN1.880e-4952.53Large subunit ribosomal protein L21e n=7 Tax=Lamia... [more]
A0A4D8XZ09_SALSN3.780e-4952.53Large subunit ribosomal protein L21e n=3 Tax=Lamia... [more]
A0A6I9TKN7_SESIN5.360e-4951.9060S ribosomal protein L21-1-like n=14 Tax=Lamiales... [more]
T2MFP5_HYDVU9.520e-4954.6660S ribosomal protein L21 n=1 Tax=Hydra vulgaris T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 102..122
NoneNo IPR availableGENE3D6.10.250.3260coord: 99..157
e-value: 4.0E-13
score: 51.1
NoneNo IPR availablePANTHERPTHR20981:SF6RIBOSOMAL PROTEIN L21coord: 1..158
IPR001147Ribosomal protein L21ePFAMPF01157Ribosomal_L21ecoord: 1..101
e-value: 5.5E-40
score: 135.3
IPR001147Ribosomal protein L21ePANTHERPTHR2098160S RIBOSOMAL PROTEIN L21coord: 1..158
IPR036948Ribosomal protein L21 superfamilyGENE3D2.30.30.70Ribosomal protein L21coord: 1..98
e-value: 1.8E-38
score: 132.5
IPR018259Ribosomal protein L21e, conserved sitePROSITEPS01171RIBOSOMAL_L21Ecoord: 37..62
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 3..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4382814..4383293 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12368.t1Gvermi12368.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4382814..4383293 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12368.t1 ID=Gvermi12368.t1|Name=Gvermi12368.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=160bp
MVRSNGKRTNTRHLFKKAFRKKGPEHLSTYLQTFKVGDFVDIHINPAVMK
GMPHKFYQGRTGRVFNISRTAVGVEVSKQVGNRIMMKRFHIRTEHVKKSR
CNEDFKHRAQQREKEAREAHKRGEKYVINKRTPVLPACAHVVDASTMELV
EPIPYEFVV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001147Ribosomal_L21e
IPR036948Ribosomal_L21_sf
IPR018259Ribosomal_L21e_CS
IPR008991Translation_prot_SH3-like_sf